BAC Information

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BAC

Clone NameB6Ng01-047I22
Chromosome15 (Build37)
Map Location 59,674,392 - 59,782,069
singlet/doubletdoublet
Overlap geneLOC665602
Upstream geneEG546638, Trmt12, Rnf139, Tatdn1, Ndufb9, Mtss1, LOC100040330, EG268809, LOC665565, Sqle, E430025E21Rik, Nsmce2, Trib1
Downstream geneEG632248, LOC665613, 4933412E24Rik, LOC100040266, LOC623048, LOC211832, LOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047I22.bB6Ng01-047I22.g
ACCDH872386DH872387
length934568
definitionDH872386|Mus musculus domesticus DNA, BAC clone: B6Ng01-047I22, 5' end.DH872387|Mus musculus domesticus DNA, BAC clone: B6Ng01-047I22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,781,129 - 59,782,069)(59,674,392 - 59,674,965)
sequence
gtttgagcaaaatctcttcccaagtctcctgtttaccaaaatcaatacag
aaataggagtagcctcaggaggccaggtatgtatcaaaataataactata
gatcaacgagggagacagtagcacacagaaaactaaacattcagcttaaa
ttcaggtgacttaggaaaaaaatcccaatttcagagctgctggaaaaagg
cctgctaatatgcctagtgtgtgatacgaagtgagctgatgaatggatac
tcagtaataaagaaatggatggaatcagaaaatagtatatattgagagag
gcaacctgggtggagcaagacaaaccttgcatgttctctctttcatatgt
gaatttttatttcctatattttattttcattctagacctgtatgccatgt
aatcttggtcgtgtccacttcccacttcctccctccagcttttcccacac
tccagccacatagttccacgaccccctgttttcctgtctaatttgtgttc
tagtagaccactaagagtgtaagtaatgcttcccatatttgtatgtgtgt
gggctcatgtactgcgccagaggtaacctaccaataactgttaccccaga
agagaaatgactttccctccttcagcagccaccaactgccactaacacct
caattagggagggagcttaggagccccttcctgctttatgctcaaatttt
aactctcttgttcttatggagatcttgtgcaagaagtggggcttctctga
attcatgtaagtaatggccacatcatgttcatggcactcactcctccatc
ctctgttccttatgttctttctcccaaggtttgatgatactgctcctgga
gcctgattttttttagattatttacttttagatttatttaacatctgtag
aacctgaaagtgaccagagactagtcgagagtga
caagcactaactggcatggtgaaactaactcagaaacacagacagcagca
acatgtcaaaagcaatctgaaaatgttcacataatatggaagggtgtggg
gagaagagacaaatgtattccttatggccccaggggctaccgattaggtg
ttagttaggctctgttatactatgcttcaataacaaaacgacgaaagatc
taggttcatctaacaaagatatttattgcttaacagaaagagaggagcca
ggcagtggtggcacacgcctttaatcccagcacttgggaggcagaggcag
gcggatttctgagttcgaggccagcctggtctacagagtgagttccagga
taaccagggctacacagagaaatgctgtccccaaaaaacaaaacaaaaca
aaacaaacaaacaaaaaacatgtatgcatgtcagcaattccacaagtagc
tgtgggtctcactcgactcaagcacagggaagactgtgaattcttgttaa
ttgttagttacatcatgtggaacacttagcaattggtgccactgtggggg
gcaaggggtgggggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_59781129_59782069
seq2: B6Ng01-047I22.b_42_975 (reverse)

seq1  TCACTCTCGGCT-GTGTCCTCTTGGTCACTTTCAGGTTTCTACAGATGTT  49
      ||||||||| || || ||    |||||||||||||| |||||||||||||
seq2  TCACTCTCGACTAGTCTC----TGGTCACTTTCAGG-TTCTACAGATGTT  45

seq1  AAATAAATCTAAAAGTTAAATAAATCTAAAAAAAATCAAGGCTCCAGGGG  99
      ||||||||||||||| ||||| ||||||||||||||| |||||||||| |
seq2  AAATAAATCTAAAAG-TAAAT-AATCTAAAAAAAATC-AGGCTCCAGGAG  92

seq1  CAGTATCATCAAACCTGGGGAGAAAGAACATAAGGAACAGAGGATGGAGG  149
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAGTATCATCAAACCTTGGGAGAAAGAACATAAGGAACAGAGGATGGAGG  142

seq1  AGTGAGTGCCATGAACATGATGTGGCCATTACTTACATGAATTCAGAGAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTGCCATGAACATGATGTGGCCATTACTTACATGAATTCAGAGAA  192

seq1  GCCCCACTTCTTGCACAAGATCTCCATAAGAACAAGAGAGTTAAAATTTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCACTTCTTGCACAAGATCTCCATAAGAACAAGAGAGTTAAAATTTG  242

seq1  AGCATAAAGCAGGAAGGGGCTCCTAAGCTCCCTCCCTAATTGAGGTGTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAAGCAGGAAGGGGCTCCTAAGCTCCCTCCCTAATTGAGGTGTTA  292

seq1  GTGGCAGTTGGTGGCTGCTGAAGGAGGGAAAGTCATTTCTCTTCTGGGGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGTTGGTGGCTGCTGAAGGAGGGAAAGTCATTTCTCTTCTGGGGT  342

seq1  AACAGTTATTGGTAGGTTACCTCTGGCGCAGTACATGAGCCCACACACAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTATTGGTAGGTTACCTCTGGCGCAGTACATGAGCCCACACACAT  392

seq1  ACAAATATGGGAAGCATTACTTACACTCTTAGTGGTCTACTAGAACACAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATGGGAAGCATTACTTACACTCTTAGTGGTCTACTAGAACACAA  442

seq1  ATTAGACAGGAAAACAGGGGGTCGTGGAACTATGTGGCTGGAGTGTGGGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACAGGAAAACAGGGGGTCGTGGAACTATGTGGCTGGAGTGTGGGA  492

seq1  AAAGCTGGAGGGAGGAAGTGGGAAGTGGACACGACCAAGATTACATGGCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGGAGGGAGGAAGTGGGAAGTGGACACGACCAAGATTACATGGCA  542

seq1  TACAGGTCTAGAATGAAAATAAAATATAGGAAATAAAAATTCACATATGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTCTAGAATGAAAATAAAATATAGGAAATAAAAATTCACATATGA  592

seq1  AAGAGAGAACATGCAAGGTTTGTCTTGCTCCACCCAGGTTGCCTCTCTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAACATGCAAGGTTTGTCTTGCTCCACCCAGGTTGCCTCTCTCA  642

seq1  ATATATACTATTTTCTGATTCCATCCATTTCTTTATTACTGAGTATCCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACTATTTTCTGATTCCATCCATTTCTTTATTACTGAGTATCCAT  692

seq1  TCATCAGCTCACTTCGTATCACACACTAGGCATATTAGCAGGCCTTTTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGCTCACTTCGTATCACACACTAGGCATATTAGCAGGCCTTTTTC  742

seq1  CAGCAGCTCTGAAATTGGGATTTTTTTCCTAAGTCACCTGAATTTAAGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCTCTGAAATTGGGATTTTTTTCCTAAGTCACCTGAATTTAAGCT  792

seq1  GAATGTTTAGTTTTCTGTGTGCTACTGTCTCCCTCGTTGATCTATAGTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTTAGTTTTCTGTGTGCTACTGTCTCCCTCGTTGATCTATAGTTA  842

seq1  TTATTTTGATACATACCTGGCCTCCTGAGGCTACTCCTATTTCTGTATTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGATACATACCTGGCCTCCTGAGGCTACTCCTATTTCTGTATTG  892

seq1  ATTTTGGTAAACAGGAGACTTGGGAAGAGATTTTGCTCAAAC  941
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGTAAACAGGAGACTTGGGAAGAGATTTTGCTCAAAC  934

seq1: chr15_59674392_59674965
seq2: B6Ng01-047I22.g_66_639

seq1  GAATTCCAAGCACTAACTGGCATGGTGAAACTAACTCAGAAACACAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCACTAACTGGCATGGTGAAACTAACTCAGAAACACAGACA  50

seq1  GCAGCAACATGTCAAAAGCAATCTGAAAATGTTCACATAATATGGAAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAACATGTCAAAAGCAATCTGAAAATGTTCACATAATATGGAAGGG  100

seq1  TGTGGGGAGAAGAGACAAATGTATTCCTTATGGCCCCAGGGGCTACCGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGAGAAGAGACAAATGTATTCCTTATGGCCCCAGGGGCTACCGAT  150

seq1  TAGGTGTTAGTTAGGCTCTGTTATACTATGCTTCAATAACAAAACGACGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGTTAGTTAGGCTCTGTTATACTATGCTTCAATAACAAAACGACGA  200

seq1  AAGATCTAGGTTCATCTAACAAAGATATTTATTGCTTAACAGAAAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTAGGTTCATCTAACAAAGATATTTATTGCTTAACAGAAAGAGAG  250

seq1  GAGCCAGGCAGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGAGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGGCAGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGAGGCAG  300

seq1  AGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTT  350

seq1  CCAGGATAACCAGGGCTACACAGAGAAATGCTGTCCCCAAAAAACAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATAACCAGGGCTACACAGAGAAATGCTGTCCCCAAAAAACAAAAC  400

seq1  AAAACAAAACAAACAAACAAAAAACATGTATGCATGTCAGCAATTCCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAACAAACAAACAAAAAACATGTATGCATGTCAGCAATTCCACA  450

seq1  AGTAGCTGTGGGTCTCACTCGACTCAAGCACAGGGAAGACTGTGAATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTGTGGGTCTCACTCGACTCAAGCACAGGGAAGACTGTGAATTCT  500

seq1  TGTTAATTGTTAGTTACATCATGTGGAACACTTAGCAATTGGTGCCACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATTGTTAGTTACATCATGTGGAACACTTAGCAATTGGTGCCACTG  550

seq1  TGGGGGGCAGGGGGTGGGGGGGAA  574
      ||||||||| ||||||||||||||
seq2  TGGGGGGCAAGGGGTGGGGGGGAA  574