BAC Information

Click to search

BAC

Clone NameB6Ng01-048B15
Chromosome15 (Build37)
Map Location 28,108,733 - 28,109,744
singlet/doubletsinglet
Overlap genenone
Upstream geneAnk, BC087945, LOC100040622, BC052328, Trio, LOC667126
Downstream geneDnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048B15.bB6Ng01-048B15.g
ACCDH872765DH872766
length1,2271,011
definitionDH872765|Mus musculus domesticus DNA, BAC clone: B6Ng01-048B15, 5' end.DH872766|Mus musculus domesticus DNA, BAC clone: B6Ng01-048B15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgtcagaggactcactaatggcttggaagcacttaaagaaatg
ttcaacattcttagtcatcaggaaaatgcaaatcaaaatgactctgagac
tatcttacagctatcagaatggctaagatcaaaaactcaactgacagttc
atgctggagatgatgtggagcaaggggaacacttctccattgctggtggg
agtacaaacttgtacaaccactttgaaaatgaatttgatggtttctcaga
aaactgagactagttctacctctagacccagtcatacaactcctgagcat
atacccaaaagatgttccatgataccacaaggacacttgcccaactatgt
tcagagcagcttaattcaaagtagccagaaattagaaaccacctagatgc
ccctcaactgaagaatggataaagaaaatgtggtacatttatacaatgga
atatcactcagctattaaaaacaacgccataaaatgttcaggcaaatgaa
tggacttagaaaatataatcctgcagcggtcgccatcttggttccgggac
tcagcagaacttaggaaattagtctgaacaggttagagggtgcgccagag
aaccggacagcttctgggacgggcggaagcacagagccgctgaggcagca
ctcttggcgggccgcagacagccggccaccatccggaacagaggacaggt
gtccgcctggctcgggagacggcctcagcctcaggagcagcagtcaccat
cttggttccaggactccctggaacttaggaatttagtctgcacaggtgag
agtctgcaccacagaagctgacagcttctgggaactgccaaagcaacaca
gcttctgagagaggccctgtttgggccttcttcttcgaccaggaggaggt
ccaaaacagatatctgcacaccttccctgtagagagcttgccagcagaga
gtgctctgagcactgaaactcagaggagagatctgtctccagtctgctga
gagagtacagatcacagaagacatctctaacgagtcactatactactact
cagagatacgatggcgaaagtacgtagatctactaacggacaagacccct
caccatcatcgaccagcctccacttcgccagtcaagacccacaccgacct
ggctgatcaagcattctagtatgtaggactcgagaccttataatctagaa
taccggaaacccctcctaagagatagc
gaattcacagcatccatgttgcctgcagagggcctgcctgcataagaccg
aacctgttgacactcggtcatagatgggtcatagggtctcatctcactca
cgggaggtattggtagtctagagctgctgggggacaggaagccactggtg
agtcactcacactcggcctctaagacgatccttacttgtttggtttacta
aagacccatgtctctatgcgagtccctggttagcttcgtgagccacaagg
gtagagggaggagctgcccggtgtgagagtaagatgttagagggtgaagg
agtttgtgtgaccagaatgtgtcatctacgcatgtaaaactgtcaaaaag
taaattaagaaaaggacatatgtacttaggtacatataacacgagatatg
gcatgagaagtaaaaaaaaaatgacaaaaattataaaggcatggtcaaaa
caagagagaggtgggagtgactgctttatgggtccttgaaagctgggatc
tgctgggtcaaggagtgtgtgtccagttgaaactgaaggctcttgtcttt
tctgctgttaagaatattagtaactggacccgtcatgtgtcaaatgtctc
tttcttttagacgtgtccttccgttacatttagaagctgcaactggctgc
cattaggaatgtcttcttccatggccaggacaggttcttccacattcctg
gacttccagttcacactgctcccgggtggggaatgtgtcttgagggcatt
gtgggtaggagaaacagacagaacactgacatcttatatatgagagctac
ttcctgtggttttaaaacccactcagcattaagtacctacctccactggc
gggggattaagtctgcagaaatttaatacttagagttctctgtctctatg
ccagcacgctggctggctcagagactggtttaccttctgacctcagctca
gatctttagtctctgtcataagcctccagggatggctggagctatttgac
cctgaaggtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28108733_28109744
seq2: B6Ng01-048B15.g_65_1075

seq1  GAATTCACAGCATCCATGTTGCCTGCAGAGGGCCTGCCTGCATAAGACCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCATCCATGTTGCCTGCAGAGGGCCTGCCTGCATAAGACCG  50

seq1  AACCTGTTGACACTCGGTCATAGATGGGTCATAGGGTCTCATCTCACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTTGACACTCGGTCATAGATGGGTCATAGGGTCTCATCTCACTCA  100

seq1  CGGGAGGTATTGGTAGTCTAGAGCTGCTGGGGGACAGGAAGCCACTGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGGTATTGGTAGTCTAGAGCTGCTGGGGGACAGGAAGCCACTGGTG  150

seq1  AGTCACTCACACTCGGCCTCTAAGACGATCCTTACTTGTTTGGTTTACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTCACACTCGGCCTCTAAGACGATCCTTACTTGTTTGGTTTACTA  200

seq1  AAGACCCATGTCTCTATGCGAGTCCCTGGTTAGCTTCGTGAGCCACAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCATGTCTCTATGCGAGTCCCTGGTTAGCTTCGTGAGCCACAAGG  250

seq1  GTAGAGGGAGGAGCTGCCCGGTGTGAGAGTAAGATGTTAGAGGGTGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGGAGGAGCTGCCCGGTGTGAGAGTAAGATGTTAGAGGGTGAAGG  300

seq1  AGTTTGTGTGACCAGAATGTGTCATCTACGCATGTAAAACTGTCAAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTGTGACCAGAATGTGTCATCTACGCATGTAAAACTGTCAAAAAG  350

seq1  TAAATTAAGAAAAGGACATATGTACTTAGGTACATATAACACGAGATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAGAAAAGGACATATGTACTTAGGTACATATAACACGAGATATG  400

seq1  GCATGAGAAGTAAAAAAAAAATGACAAAAATTATAAAGGCATGGTCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGAAGTAAAAAAAAAATGACAAAAATTATAAAGGCATGGTCAAAA  450

seq1  CAAGAGAGAGGTGGGAGTGACTGCTTTATGGGTCCTTGAAAGCTGGGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAGAGGTGGGAGTGACTGCTTTATGGGTCCTTGAAAGCTGGGATC  500

seq1  TGCTGGGTCAAGGAGTGTGTGTCCAGTTGAAACTGAAGGCTCTTGTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGTCAAGGAGTGTGTGTCCAGTTGAAACTGAAGGCTCTTGTCTTT  550

seq1  TCTGCTGTTAAGAATATTAGTAACTGGACCCGTCATGTGTCAAATGTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGTTAAGAATATTAGTAACTGGACCCGTCATGTGTCAAATGTCTC  600

seq1  TTTCTTTTAGACGTGTCCTTCCGTTACATTTAGAAGCTGCAACTGGCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTAGACGTGTCCTTCCGTTACATTTAGAAGCTGCAACTGGCTGC  650

seq1  CATTAGGAATGTCTTCTTCCATGGCCAGGACAGGTTCTTCCACATTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGAATGTCTTCTTCCATGGCCAGGACAGGTTCTTCCACATTCCTG  700

seq1  GACTTCCAGTTCACACTGCT-CCGGGTGGGGAATGTGTCTTGAGGGCATT  749
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GACTTCCAGTTCACACTGCTCCCGGGTGGGGAATGTGTCTTGAGGGCATT  750

seq1  GTGGGTAGGAGAAACAGACAGAACACTGACATCTTATATATGAGAGCTAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTAGGAGAAACAGACAGAACACTGACATCTTATATATGAGAGCTAC  800

seq1  TTCCTGTGGTTTTTAAAACCCACTCAGCATTAAGTACCTACCTCCACTGG  849
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTGG-TTTTAAAACCCACTCAGCATTAAGTACCTACCTCCACTGG  849

seq1  CGGGGGATTAAGTCTGCAG-AATTTAATACTTAGAGTTCTCTGTCTCTAT  898
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CGGGGGATTAAGTCTGCAGAAATTTAATACTTAGAGTTCTCTGTCTCTAT  899

seq1  GCCAGCACGCTGGCTGGCTCCAGAGACTGGTTTACCTTCTGACCTCAGGC  948
      ||||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  GCCAGCACGCTGGCTGGCT-CAGAGACTGGTTTACCTTCTGACCTCA-GC  947

seq1  TCAGATCTTTTAGTCTCTGTCATAAGCCTCAGGTGATGGGCTGAGCTATT  998
      ||||||| ||||||||||||||||||||||  | |||||   ||||||||
seq2  TCAGATC-TTTAGTCTCTGTCATAAGCCTCCAGGGATGGCTGGAGCTATT  996

seq1  TGACCCTG-AGGTCA  1012
      |||||||| ||||||
seq2  TGACCCTGAAGGTCA  1011