BAC Information

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BAC

Clone NameB6Ng01-050O09
Chromosome15 (Build37)
Map Location 68,787,493 - 68,788,611
singlet/doubletsinglet
Overlap geneKhdrbs3
Upstream geneZfat1, LOC100041000, EG665945, EG633752
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050O09.bB6Ng01-050O09.g
ACCDH874707DH874708
length1,102803
definitionDH874707|Mus musculus domesticus DNA, BAC clone: B6Ng01-050O09, 5' end.DH874708|Mus musculus domesticus DNA, BAC clone: B6Ng01-050O09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatggtcactcctcttaagccttccaagggcagggattaatggtg
tgagtcaccatgcccagctgcttctcttgagcactgtctctccctcctgt
atatggatgcatgggtgcctgtgaaggctggaagagggcatccgatatgc
tggagctggggttcaggcaattgtgagcggcctcacatggatgctgagaa
tcaaactcctgtcctgtacatgagcagcaaacagtgagcacgcttggtag
atgggccatgtctctagccccattttctctccacttcttgtgtttttgtt
gatacctggcacattgctctttccttcgtcttaacgtttaatgtactttt
cctttgttagtttcttccactggacacttagattgttgaactcagaggtg
acttctttctatgttgcatctattgctctgcactgttgaagatcctaatg
gtttcagaaggtgtcactgtccccagccatcccagcccctccccaggtga
cctgtctctccctctccagtcctcacctggaacagggcaggtggaggaga
tccctgcttgtgagggttatacgtcttaccaaatggcaaacgcgtttgct
tttgaggggttctgggtggaggcagtgttacccctgcttcctaaaagaac
tttctttgcttttctgacctagtcagtcttgctaggagcaccaaggggag
gcttgaggaaaaagcaaaggcgctgtattttccagcccatcttcagctgt
tgtgccagcccgcactcggctgtaagagtgtgttaatacttctttcccca
agttgtcacagctgtactctgccaaagctaaagccttcctgggccttatc
tgccattgtggttgtttatcatctttaagttcatcttacccttgttttgt
ggctcaaaataatacattgtagacaatccaaccgttttcgtttccacggg
tgggaagggttcttcctgagatattcagcgtcccagtaaagagaaatcaa
cccgattgggtcttaaatgacccagttgatgcgttcgggctcacggagtg
ccatctataagaaaacgaacgtgacttgacaaggcttcgtccctctgtca
ga

gaattctatggtctactgcacacagtctgcattcctatcccagaattatc
tactccgcgtttcatgcccagagccagtggagtgatggtgatgggggcag
gaaggggttctgcctcctagcttcagtacaacttccacattctaaggctg
ctgctgctgataggattttataaaggagagaggagatggagaggggatag
gggagctggtagtgcaacctgactggctaatggcgcctgatgcagggttt
tcgccttgcgcatccctgcggtatttcacaccgcatatggtgcactctca
gttaatctgctctgatgccgcatacttaagccagccccgacacccgccac
acccgttgacgcgccctgacaggcttgtctgctccggcttccgtttacag
acatctgtgacctgtcttcgggagctgcatgtgtgagaggttttacacct
tcctcaccgaaacggcgagactaaagggcctcgtgattacaccgattttt
tataggttaatgtcatgataataatagggttcatgagacgtcaggtggca
cttttcgtggaaatgtgcgcggaacccctatatggttagatgttcaaata
catccaaatatgtatccgctcatgagacaataacactgataaatgctcca
taataatgcaacaggatagtatgagcattccacatgtccgagtcgccctg
attcccttatgcggcatttagccttcctgctttgctccccagaacgctgg
tgaaagtaaagtgctgagatcaattgggtgcacgagtgggtacttcgaac
tga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_68787493_68788611
seq2: B6Ng01-050O09.b_43_1144

seq1  GAATTCATGGTCACTCCTCTTAAGCCTTCCAAGGGCAGGGATTAATGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGTCACTCCTCTTAAGCCTTCCAAGGGCAGGGATTAATGGTG  50

seq1  TGAGTCACCATGCCCAGCTGCTTCTCTTGAGCACTGTCTCTCCCTCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCACCATGCCCAGCTGCTTCTCTTGAGCACTGTCTCTCCCTCCTGT  100

seq1  ATATGGATGCATGGGTGCCTGTGAAGGCTGGAAGAGGGCATCCGATATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGATGCATGGGTGCCTGTGAAGGCTGGAAGAGGGCATCCGATATGC  150

seq1  TGGAGCTGGGGTTCAGGCAATTGTGAGCGGCCTCACATGGATGCTGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTGGGGTTCAGGCAATTGTGAGCGGCCTCACATGGATGCTGAGAA  200

seq1  TCAAACTCCTGTCCTGTACATGAGCAGCAAACAGTGAGCACGCTTGGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTCCTGTCCTGTACATGAGCAGCAAACAGTGAGCACGCTTGGTAG  250

seq1  ATGGGCCATGTCTCTAGCCCCATTTTCTCTCCACTTCTTGTGTTTTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCCATGTCTCTAGCCCCATTTTCTCTCCACTTCTTGTGTTTTTGTT  300

seq1  GATACCTGGCACATTGCTCTTTCCTTCGTCTTAACGTTTAATGTACTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTGGCACATTGCTCTTTCCTTCGTCTTAACGTTTAATGTACTTTT  350

seq1  CCTTTGTTAGTTTCTTCCACTGGACACTTAGATTGTTGAACTCAGAGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTTAGTTTCTTCCACTGGACACTTAGATTGTTGAACTCAGAGGTG  400

seq1  ACTTCTTTCTATGTTGCATCTATTGCTCTGCACTGTTGAAGATCCTAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTTCTATGTTGCATCTATTGCTCTGCACTGTTGAAGATCCTAATG  450

seq1  GTTTCAGAAGGTGTCACTGTCCCCAGCCATCCCAGCCCCTCCCCAGGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGAAGGTGTCACTGTCCCCAGCCATCCCAGCCCCTCCCCAGGTGA  500

seq1  CCTGTCTCTCCCTCTCCAGTCCTCACCTGGAACAGGGCAGGTGGAGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCTCCCTCTCCAGTCCTCACCTGGAACAGGGCAGGTGGAGGAGA  550

seq1  TCCCTGCTTGTGAGGGTTATACGTCTTACCAAATGGCAAACGCGTTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCTTGTGAGGGTTATACGTCTTACCAAATGGCAAACGCGTTTGCT  600

seq1  TTTGAGGGGTTCTGGGTGGAGGCAGTGTTACCCCTGCTTCCTAAAAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGGGTTCTGGGTGGAGGCAGTGTTACCCCTGCTTCCTAAAAGAAC  650

seq1  TTTCTTTGCTTTTCTGACCTAGTCAGTCTTGCTAGGAGCACCAAGGGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGCTTTTCTGACCTAGTCAGTCTTGCTAGGAGCACCAAGGGGAG  700

seq1  GCTTGAGGAAAAAGCAAAGGCGCTGTATTTTCCAGCCCATCTTCAGCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAGGAAAAAGCAAAGGCGCTGTATTTTCCAGCCCATCTTCAGCTGT  750

seq1  TGTGCCAGCCCGCACTCGGCTGTAAGAGTGTGTTAATACTTCTTTCCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCAGCCCGCACTCGGCTGTAAGAGTGTGTTAATACTTCTTTCCCCA  800

seq1  AGGTTGTCACAGCTGTACTCTGCCAAAGCTAAAGCCTTCCTGGGCCTTAT  850
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-GTTGTCACAGCTGTACTCTGCCAAAGCTAAAGCCTTCCTGGGCCTTAT  849

seq1  CTGCCATTGTGGTTGTTTATCATCTTTAAGTTCATCTTACCCTTGTTTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATTGTGGTTGTTTATCATCTTTAAGTTCATCTTACCCTTGTTTTG  899

seq1  TGGCTCAAAATAATACATTGTAGACAATCCAACCGTTTTCGTTTTCAAGG  950
      ||||||||||||||||||||||||||||||||||||||||| |||| | |
seq2  TGGCTCAAAATAATACATTGTAGACAATCCAACCGTTTTCG-TTTCCACG  948

seq1  GGTGGGCAGTGTTCTTCCTAGTGTTTTCAGCGTCCCAAGTAAAAGTAGAA  1000
      |||||| || |||||||||    | ||||||||||| ||||||   ||||
seq2  GGTGGGAAGGGTTCTTCCTGAGATATTCAGCGTCCC-AGTAAA--GAGAA  995

seq1  TATCAGCCCGATTGGCTCTTAAATGACCCCAGTTGGATGCTGTTCGGGCT  1050
       |||| ||||||||| |||||||||| ||||||| ||||| |||||||||
seq2  -ATCAACCCGATTGGGTCTTAAATGA-CCCAGTT-GATGC-GTTCGGGCT  1041

seq1  GCACGGAGTGCACTCAAATAGAGAAAGACGACTGTGACTGTGACAAGGCT  1100
       ||||||||||  ||  ||| ||||| ||||  |||||| ||||||||||
seq2  -CACGGAGTGCCATC-TATA-AGAAA-ACGAACGTGACT-TGACAAGGCT  1086

seq1  TCAGTCACCTTCTGTCAGA  1119
      || ||  || |||||||||
seq2  TC-GT--CCCTCTGTCAGA  1102


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