BAC Information

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BAC

Clone NameB6Ng01-051J12
Chromosome15 (Build37)
Map Location 98,762,610 - 98,910,050
singlet/doubletdoublet
Overlap geneTuba1b, Tuba1a, EG668092, Tuba1c, Prph1, Troap
Upstream geneTmem106c, Col2a1, Senp1, Pfkm, Asb8, AI836003, Olfr288, LOC634104, EG629524, H1fnt, Zfp641, Olfr285, Olfr284, Olfr283, 1700031M16Rik, LOC100042818, Olfr282, LOC629549, Olfr281, Olfr240-ps1, GA_x5J8B7W76D0-7895713-7896429, Lalba, Olfr234, Olfr278-ps1, 2310037I24Rik, LOC100043418, Ccnt1, 4930415O20Rik, Adcy6, Cacnb3, Ddx23, Rnd1, Ccdc65, Fkbp11, Arf3, 5830427D03Rik, Wnt10b, Wnt1, Ddn, Prkag1, Mll2, Rhebl1, Dhh, Lmbr1l
Downstream geneC1ql4, 2810451A06Rik, Spats2, Kcnh3, Mcrs1, EG545136, Prpf40b, Fmnl3, Tegt, C230021P08Rik, 4930556P03Rik, Faim2, LOC545137, Aqp2, Aqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481, LOC100042918, 1700030F18Rik, Gm920, D330037H05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051J12.bB6Ng01-051J12.g
ACCDH875186DH875187
length279904
definitionDH875186|Mus musculus domesticus DNA, BAC clone: B6Ng01-051J12, 5' end.DH875187|Mus musculus domesticus DNA, BAC clone: B6Ng01-051J12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,762,610 - 98,762,888)(98,909,149 - 98,910,050)
sequence
tgtcagatcaacattcagggccccatcaaatctgagggaagcagtgatgg
aagacacaatctggctaataaggcggttaaggttggtgtaggttgggcgc
tcaatgtcgaggtttctacgacagatgtcatagatggcctcattgtctac
catgaaggcacaatcagagtgctccagggtggtgtgggtggtgaggatgg
aattgtagggctcaaccacagcagtggaaacctggggggctgggtaaatg
gataactccagcttggacttctttcctta
gaattcacgatggctcagccccaggcaattctcctgcctcctctgggtta
cagtcatgttccaccaagcgtggctctaaactaccaatttatgacaccaa
tccttctcccacgtcctttcagtaccttatacatttagttttagaaagaa
catgtcaccatgtgacatcctatatatttcattttacatttgtggggtgg
ggtttattttgtcttttattattttgcccccctttctagaatatacacac
acacacacacacacacacacacatatgtatatatatacacacacacacac
acatacacacatatatatatatacacacacacacatacatacacatacac
acacacacacacacacacacacacacacacacacacacatatattttttc
tggaactagaaccatggctgaatccaaaagccagttagcaaatgccagtg
gaatgaaggaattaatgcttggttggtaagtgttggccatgtttaagcca
ctgtactgatttgatagtgacacacataacagtctgtcatctctcaccct
gggtcccagatacccaacaaaggaagtcagatctaccctgaagagggctt
ggtcccaactccagcaaaagaccaaataccctgagtcccgggtctgccaa
ttctacccacaaccctcagtgtgcctcctgaacaccccttccccatcctg
ggagggtctcggctcaccctggtgtttgtcagactttcttttaatggtat
ccgttgagccagacccagatgatgtcttccccctccgtcgtcggagtgag
ggacagcctcctgctcgcctcggaggggtaaggaacttgggaggagacag
acattcatttttctgtagtattctacaacaacaaagtctacccgtttcag
catc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_98762610_98762888
seq2: B6Ng01-051J12.b_49_327

seq1  TGTCAGATCAACATTCAGGGCCCCATCAAATCTGAGGGAAGCAGTGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGATCAACATTCAGGGCCCCATCAAATCTGAGGGAAGCAGTGATGG  50

seq1  AAGACACAATCTGGCTAATAAGGCGGTTAAGGTTGGTGTAGGTTGGGCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACAATCTGGCTAATAAGGCGGTTAAGGTTGGTGTAGGTTGGGCGC  100

seq1  TCAATGTCGAGGTTTCTACGACAGATGTCATAGATGGCCTCATTGTCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTCGAGGTTTCTACGACAGATGTCATAGATGGCCTCATTGTCTAC  150

seq1  CATGAAGGCACAATCAGAGTGCTCCAGGGTGGTGTGGGTGGTGAGGATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGGCACAATCAGAGTGCTCCAGGGTGGTGTGGGTGGTGAGGATGG  200

seq1  AATTGTAGGGCTCAACCACAGCAGTGGAAACCTGGGGGGCTGGGTAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAGGGCTCAACCACAGCAGTGGAAACCTGGGGGGCTGGGTAAATG  250

seq1  GAGAACTCCAGCTTGGACTTCTTTCCGTA  279
      || ||||||||||||||||||||||| ||
seq2  GATAACTCCAGCTTGGACTTCTTTCCTTA  279

seq1: chr15_98909149_98910050
seq2: B6Ng01-051J12.g_67_970 (reverse)

seq1  GATGCTG-AACGGGTAGACTTTGGTGTTGTAG-ATACTACAG-GAAATGA  47
      ||||||| ||||||||||||||| |||||||| |||||||||  ||||||
seq2  GATGCTGAAACGGGTAGACTTTGTTGTTGTAGAATACTACAGAAAAATGA  50

seq1  ATGTCCTGTCTCCTCCCAGCTTCCTTACCCCTCCGAGGCGAGCAGGAGGC  97
      |||| |||||||||||||  ||||||||||||||||||||||||||||||
seq2  ATGT-CTGTCTCCTCCCAAGTTCCTTACCCCTCCGAGGCGAGCAGGAGGC  99

seq1  TGTCCCTCACTCCGACGACGGAGGGGGAAGACATCATCTGGGTCTGGCTC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTCACTCCGACGACGGAGGGGGAAGACATCATCTGGGTCTGGCTC  149

seq1  AACGGATACCATTAAAAGAAAGTCTGACAAACACCAGGGTGAGCCGAGAC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGATACCATTAAAAGAAAGTCTGACAAACACCAGGGTGAGCCGAGAC  199

seq1  CCTCCCAGGATGGGGAAGGGGTGTTCAGGAGGCACACTGAGGGTTGTGGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAGGATGGGGAAGGGGTGTTCAGGAGGCACACTGAGGGTTGTGGG  249

seq1  TAGAATTGGCAGACCCGGGACTCAGGGTATTTGGTCTTTTGCTGGAGTTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGGCAGACCCGGGACTCAGGGTATTTGGTCTTTTGCTGGAGTTG  299

seq1  GGACCAAGCCCTCTTCAGGGTAGATCTGACTTCCTTTGTTGGGTATCTGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAAGCCCTCTTCAGGGTAGATCTGACTTCCTTTGTTGGGTATCTGG  349

seq1  GACCCAGGGTGAGAGATGACAGACTGTTATGTGTGTCACTATCAAATCAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGGGTGAGAGATGACAGACTGTTATGTGTGTCACTATCAAATCAG  399

seq1  TACAGTGGCTTAAACATGGCCAACACTTACCAACCAAGCATTAATTCCTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGGCTTAAACATGGCCAACACTTACCAACCAAGCATTAATTCCTT  449

seq1  CATTCCACTGGCATTTGCTAACTGGCTTTTGGATTCAGCCATGGTTCTAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCACTGGCATTTGCTAACTGGCTTTTGGATTCAGCCATGGTTCTAG  499

seq1  TTCCAGAAAAAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAAAAAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  549

seq1  TGTGTGTGTATGTGTATGTATGTGTGTGTGTGTATATATATATATGTGTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTATGTGTATGTATGTGTGTGTGTGTATATATATATATGTGTG  599

seq1  TATGTGTGTGTGTGTGTGTATATATATACATATGTGTGTGTGTGTGTGTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGTGTGTGTGTGTATATATATACATATGTGTGTGTGTGTGTGTG  649

seq1  TGTGTGTGTGTATATTCTAGAAAGGGGGGCAAAATAATAAAAGACAAAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTATATTCTAGAAAGGGGGGCAAAATAATAAAAGACAAAAT  699

seq1  AAACCCCACCCCACAAATGTAAAATGAAATATATAGGATGTCACATGGTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCACCCCACAAATGTAAAATGAAATATATAGGATGTCACATGGTG  749

seq1  ACATGTTCTTTCTAAAACTAAATGTATAAGGTACTGAAAGGACGTGGGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTCTTTCTAAAACTAAATGTATAAGGTACTGAAAGGACGTGGGAG  799

seq1  AAGGATTGGTGTCATAAATTGGTAGTTTAGAGCCACGCTTGGTGGAACAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTGGTGTCATAAATTGGTAGTTTAGAGCCACGCTTGGTGGAACAT  849

seq1  GACTGTAACCCAGAGGAGGCAGGAGAATTGCCTGGGGCTGAGCCATCGTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTAACCCAGAGGAGGCAGGAGAATTGCCTGGGGCTGAGCCATCGTG  899

seq1  AATTC  902
      |||||
seq2  AATTC  904