BAC Information

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BAC

Clone NameB6Ng01-052L08
Chromosome15 (Build37)
Map Location 69,287,267 - 69,382,085
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665945, EG633752, Khdrbs3
Downstream geneLOC383050
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052L08.bB6Ng01-052L08.g
ACCDH875979DH875980
length1,006511
definitionDH875979|Mus musculus domesticus DNA, BAC clone: B6Ng01-052L08, 5' end.DH875980|Mus musculus domesticus DNA, BAC clone: B6Ng01-052L08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,381,080 - 69,382,085)(69,287,267 - 69,287,783)
sequence
gaattcatccctctactcaactcagtttttctactccatggtatgtctta
gagtttcttaaccatattagggcacagttttcttctctacaaaacaaaca
caggcctggccgggtgacatacatctttaagttcagaacctgggagacaa
atcactgtgactttgagaccaggctagccagggctatggggtatagcctt
gtttcaaccacacaaaataaaatataataataattaatggtgattatgga
ttttactgattacatattgtttgccaagtgcttttctctgtggctcacat
gcatttatatacttttaagtccttcagtatcttgaggtagatattagcta
catttcccatagagaggctcaagcacaggaatgttaaatgattagcctaa
gggcgctgcatgacttagtgcaggaaatagcatttcagatagaggcttaa
gatatgcttgtctgccagaagaatgctgaatctagactttgaaatgtcag
tgagtccaccacaatgctgggacttttagatgttcttgctggaaaaacaa
attgactaaaccactttggtaaatcaggatgtaacaaggaaggaaacaca
cactctgagacctaccagctctactcctgagtgtccatcaaagggacata
gtttcctgtatcaaactcagacatcagtacacacactgagactctattta
aaccacttgaaaactataaattccccacatttacggaaagtaagtataaa
tttttatgtcttcacactatcgaattaatactaagtgacctgatttaaaa
actggaaattccttcagtgtcattgaatgtcatagaagatatatgtgaca
gctgtaagatgctaaaggagtatggggtatgcacattttttacaatacac
ctgaataaatttgtaaactgaaacatggtgtagtgagtcagccagtggtc
agttctgaagaaaagagtaagtggaaagagttaaaaaggcattctcctac
atctgg
aggatgaaggaatgaaataaattaacagaaaccccgccttgtgttgattc
tctgtaataggccagagtccttgcaagtaattaatagaaagttaagaagc
caatttacttagcaattggaagagtctttgtagaagcccttttaaggata
aaagcagaaatcacagaggaaactagaaacaatggtaaggaatgaactgc
ttgctctgaattccttagggaagatgtcttttcaagtggagttcaaggac
aagcagggttatttgcagatttgaaaatgccatatcgctgggtaaatgag
atgacaggagatcttagagtagagacagaatcagactctttcctgctttc
tctgtgactttgggaagttgatcaacctgtttgagtctcatattttcatt
ctgtgaatgaaggatacacatgtactttgatttggaagaaccagatgaga
aaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatgtgtgtgtgtatgtg
tgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_69381080_69382085
seq2: B6Ng01-052L08.b_44_1049 (reverse)

seq1  CCAGATGTA-GAGAATGCCTTTTTTAACTCTTTCCACTTACTCTTTTCTT  49
      ||||||||| ||||||||| ||||||||||||||||||||||||||||||
seq2  CCAGATGTAGGAGAATGCC-TTTTTAACTCTTTCCACTTACTCTTTTCTT  49

seq1  CAGAACTGACCACTGGCCTGACTCACTACACCATGTTTCAGTTTACAAAT  99
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAGAACTGACCACTGG-CTGACTCACTACACCATGTTTCAGTTTACAAAT  98

seq1  TTATTCAGGTGTATTGTAAAAAATGTGCATACCCCATACTCC-TTAGCAT  148
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTATTCAGGTGTATTGTAAAAAATGTGCATACCCCATACTCCTTTAGCAT  148

seq1  CTTACAGCTGTCACATATATCTTCTATGACATTCAATGACACTGAAGGAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGCTGTCACATATATCTTCTATGACATTCAATGACACTGAAGGAA  198

seq1  TTTCCAGTTTTTAAATCAGGTCACTTAGTATTAATTCGATAGTGTGAAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTTTTTAAATCAGGTCACTTAGTATTAATTCGATAGTGTGAAGA  248

seq1  CATAAAAATTTATACTTACTTTCCGTAAATGTGGGGAATTTATAGTTTTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAATTTATACTTACTTTCCGTAAATGTGGGGAATTTATAGTTTTC  298

seq1  AAGTGGTTTAAATAGAGTCTCAGTGTGTGTACTGATGTCTGAGTTTGATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTTTAAATAGAGTCTCAGTGTGTGTACTGATGTCTGAGTTTGATA  348

seq1  CAGGAAACTATGTCCCTTTGATGGACACTCAGGAGTAGAGCTGGTAGGTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAACTATGTCCCTTTGATGGACACTCAGGAGTAGAGCTGGTAGGTC  398

seq1  TCAGAGTGTGTGTTTCCTTCCTTGTTACATCCTGATTTACCAAAGTGGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTGTGTGTTTCCTTCCTTGTTACATCCTGATTTACCAAAGTGGTT  448

seq1  TAGTCAATTTGTTTTTCCAGCAAGAACATCTAAAAGTCCCAGCATTGTGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAATTTGTTTTTCCAGCAAGAACATCTAAAAGTCCCAGCATTGTGG  498

seq1  TGGACTCACTGACATTTCAAAGTCTAGATTCAGCATTCTTCTGGCAGACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCACTGACATTTCAAAGTCTAGATTCAGCATTCTTCTGGCAGACA  548

seq1  AGCATATCTTAAGCCTCTATCTGAAATGCTATTTCCTGCACTAAGTCATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATCTTAAGCCTCTATCTGAAATGCTATTTCCTGCACTAAGTCATG  598

seq1  CAGCGCCCTTAGGCTAATCATTTAACATTCCTGTGCTTGAGCCTCTCTAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCCCTTAGGCTAATCATTTAACATTCCTGTGCTTGAGCCTCTCTAT  648

seq1  GGGAAATGTAGCTAATATCTACCTCAAGATACTGAAGGACTTAAAAGTAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATGTAGCTAATATCTACCTCAAGATACTGAAGGACTTAAAAGTAT  698

seq1  ATAAATGCATGTGAGCCACAGAGAAAAGCACTTGGCAAACAATATGTAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGCATGTGAGCCACAGAGAAAAGCACTTGGCAAACAATATGTAAT  748

seq1  CAGTAAAATCCATAATCACCATTAATTATTATTATATTTTATTTTGTGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAATCCATAATCACCATTAATTATTATTATATTTTATTTTGTGTG  798

seq1  GTTGAAACAAGGCTATACCCCATAGCCCTGGCTAGCCTGGTCTCAAAGTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAACAAGGCTATACCCCATAGCCCTGGCTAGCCTGGTCTCAAAGTC  848

seq1  ACAGTGATTTGTCTCCCAGGTTCTGAACTTAAAGATGTATGTCACCCGGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGATTTGTCTCCCAGGTTCTGAACTTAAAGATGTATGTCACCCGGC  898

seq1  CAGGCCTGTGTTTGTTTTGTAGAGAAGAAAACTGTGCCCTAATATGGTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTGTGTTTGTTTTGTAGAGAAGAAAACTGTGCCCTAATATGGTTA  948

seq1  AGAAACTCTAAGACATACCATGGAGTAGAAAAACTGAGTTGAGTAGAGGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTCTAAGACATACCATGGAGTAGAAAAACTGAGTTGAGTAGAGGG  998

seq1  ATGAATTC  1006
      ||||||||
seq2  ATGAATTC  1006

seq1: chr15_69287267_69287783
seq2: B6Ng01-052L08.g_66_582

seq1  GAATTCAGGATGAAGGAATGAAATAAATTAACAGAAACCCCGCCTTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGATGAAGGAATGAAATAAATTAACAGAAACCCCGCCTTGTGT  50

seq1  TGATTCTCTGTAATAGGCCAGAGTCCTTGCAAGTAATTAATAGAAAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTCTGTAATAGGCCAGAGTCCTTGCAAGTAATTAATAGAAAGTTA  100

seq1  AGAAGCCAATTTACTTAGCAATTGGAAGAGTCTTTGTAGAAGCCCTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCAATTTACTTAGCAATTGGAAGAGTCTTTGTAGAAGCCCTTTTA  150

seq1  AGGATAAAAGCAGAAATCACAGAGGAAACTAGAAACAATGGTAAGGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAAAGCAGAAATCACAGAGGAAACTAGAAACAATGGTAAGGAATG  200

seq1  AACTGCTTGCTCTGAATTCCTTAGGGAAGATGTCTTTTCAAGTGGAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTTGCTCTGAATTCCTTAGGGAAGATGTCTTTTCAAGTGGAGTTC  250

seq1  AAGGACAAGCAGGGTTATTTGCAGATTTGAAAATGCCATATCGCTGGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAAGCAGGGTTATTTGCAGATTTGAAAATGCCATATCGCTGGGTA  300

seq1  AATGAGATGACAGGAGATCTTAGAGTAGAGACAGAATCAGACTCTTTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGATGACAGGAGATCTTAGAGTAGAGACAGAATCAGACTCTTTCCT  350

seq1  GCTTTCTCTGTGACTTTGGGAAGTTGATCAACCTGTTTGAGTCTCATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTCTGTGACTTTGGGAAGTTGATCAACCTGTTTGAGTCTCATATT  400

seq1  TTCATTCTGTGAATGAAGGATACACATGTACTTTGATTTGGAAGAACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCTGTGAATGAAGGATACACATGTACTTTGATTTGGAAGAACCAG  450

seq1  ATGAGAAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGTGTGTG  500

seq1  TATGTGTGTGTGTGTGT  517
      |||||||||||||||||
seq2  TATGTGTGTGTGTGTGT  517