BAC Information

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BAC

Clone NameB6Ng01-053F15
Chromosome15 (Build37)
Map Location 50,144,624 - 50,145,727
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039539, LOC665160
Downstream geneTrps1, LOC100039644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053F15.bB6Ng01-053F15.g
ACCDH876425DH876426
length1,101234
definitionDH876425|Mus musculus domesticus DNA, BAC clone: B6Ng01-053F15, 5' end.DH876426|Mus musculus domesticus DNA, BAC clone: B6Ng01-053F15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttctagtttcttaataggttctctcctttgaatatttctagg
acattgaagagtcctattgttaaaggaaacagaaggagataatcactaaa
cacaaagctttatcataagtaaagacatattccaattgcctaatggagaa
aatatttttcctgaaattaaaataaatttaagaatatgtccaattactct
ttggtgtttttttctaataataaaatgtcaggcacttgtggatacacaga
ctatttcattatataataaatgtccagttctacttaaatgactcctctca
aacttgctgggtacagatagtatgctgcagtggaacaaacaaaacagaca
acatcttttgatctactttgtggtttcttcctagtgcatttttctttcct
tctgattatctcttccatagcttctaggatttagtgtttaggcaaagtga
tataaagagcaaataattcttagtacatagacattgttatgagctggcat
ttatgttttctagaattagtgggtttaaaggctattaattgtgaatgtaa
ttttatttttaatacagtttctacaattagtatgtctatatgtacagtat
ggttgcaggtttgactagtacatgcttttcatagaaattttttttggaaa
tttcctataggtttctgttttcagaatttacagccttatttatcctggat
cagacttgtgggcagccagtatcctaccactttctgctattctaaagagt
gaatttctccactagtcctttctcactagctctgtttcttaagatcacga
aattcccatgtaccctaacccctttacatctgattgttccttcaaagtct
acataaggcaactttgcctgaatatctgatattatagtcccattattcat
atacattagtataaatatcagatgcattcttccctcaagtataggacaat
aaaattatatataaatgtaatatatataattttattgtctttatactatt
atttagaaagcatacatagaaaatgcttgtcacttcatgggaagtagtga
taacaagatttaaaccaacacattggtggaaaatgtaaattttccataaa
a
atcgaaatttttcttgacttttgaaaatttactggatctgaagctaaaat
catgctgaatgttacccaggaagaatatgcagaataaagctgtgtttata
gttccacacaggataagaaattgtgaaggaaaatggttcataaggtgtgt
gtgtgtcacacccccaccaccacatgtgtgtaagtaagcccatcactgcc
ggcatctttgaatttattttactagttaattcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_50144624_50145727
seq2: B6Ng01-053F15.b_46_1146 (reverse)

seq1  TTTTATTAGAAAATTTACATTTT-CAACAATGTGTAGTTTTAAATCTTTG  49
      ||||| | ||||||||||||||| || |||||||| | |||||||| |||
seq2  TTTTA-TGGAAAATTTACATTTTCCACCAATGTGTTGGTTTAAATC-TTG  48

seq1  TTATCACTACTT-CCATGAAGTGACAAGCATTTTTCTATGTATGCTTTCT  98
      |||||||||||| ||||||||||||||||| |||||||||||||||||||
seq2  TTATCACTACTTCCCATGAAGTGACAAGCA-TTTTCTATGTATGCTTTCT  97

seq1  AAAT-ATAGTTATAAAGACAATAAAATTATATATATTACATTTATATATA  147
      |||| |||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAG-TATAAAGACAATAAAATTATATATATTACATTTATATATA  146

seq1  ATTTTATTGTCCTTATAACTTGAGGGAAGAATGCATCTGATATTTATACC  197
      |||||||||||| ||| ||||||||||||||||||||||||||||||| |
seq2  ATTTTATTGTCC-TAT-ACTTGAGGGAAGAATGCATCTGATATTTATA-C  193

seq1  TAATGTATATGAATAATGGGACTATAATATCAGAATATTCAGGCAAAGTT  247
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAATGTATATGAATAATGGGACTATAATATCAG-ATATTCAGGCAAAGTT  242

seq1  GCCTTATGTAGACTTTGAAGGAACAATCAGATGTAAAGGGGTTAGGGTAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTATGTAGACTTTGAAGGAACAATCAGATGTAAAGGGGTTAGGGTAC  292

seq1  ATGGGAATTTCGTGATCTTAAG-AACAGAGCTAGTGAGAAAGGACTAGTG  346
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATGGGAATTTCGTGATCTTAAGAAACAGAGCTAGTGAGAAAGGACTAGTG  342

seq1  GAGAAATTCACTCTTTAGAATAGCAG-AAGTGGTAGGATACTGGCTGCCC  395
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAGAAATTCACTCTTTAGAATAGCAGAAAGTGGTAGGATACTGGCTGCCC  392

seq1  ACAAGTCTGATCCAGGATAAATAAGGCTGTAAATTCTGAAAACAGAAACC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCTGATCCAGGATAAATAAGGCTGTAAATTCTGAAAACAGAAACC  442

seq1  TATAGGAAATTTCCAAAAAAAATTTCTATGAAAAGCATGTACTAGTCAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAAATTTCCAAAAAAAATTTCTATGAAAAGCATGTACTAGTCAAA  492

seq1  CCTGCAACCATACTGTACATATAGACATACTAATTGTAGAAACTGTATTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAACCATACTGTACATATAGACATACTAATTGTAGAAACTGTATTA  542

seq1  AAAATAAAATTACATTCACAATTAATAGCCTTTAAACCCACTAATTCTAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAATTACATTCACAATTAATAGCCTTTAAACCCACTAATTCTAG  592

seq1  AAAACATAAATGCCAGCTCATAACAATGTCTATGTACTAAGAATTATTTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATAAATGCCAGCTCATAACAATGTCTATGTACTAAGAATTATTTG  642

seq1  CTCTTTATATCACTTTGCCTAAACACTAAATCCTAGAAGCTATGGAAGAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATATCACTTTGCCTAAACACTAAATCCTAGAAGCTATGGAAGAG  692

seq1  ATAATCAGAAGGAAAGAAAAATGCACTAGGAAGAAACCACAAAGTAGATC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAGAAGGAAAGAAAAATGCACTAGGAAGAAACCACAAAGTAGATC  742

seq1  AAAAGATGTTGTCTGTTTTGTTTGTTCCACTGCAGCATACTATCTGTACC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATGTTGTCTGTTTTGTTTGTTCCACTGCAGCATACTATCTGTACC  792

seq1  CAGCAAGTTTGAGAGGAGTCATTTAAGTAGAACTGGACATTTATTATATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGTTTGAGAGGAGTCATTTAAGTAGAACTGGACATTTATTATATA  842

seq1  ATGAAATAGTCTGTGTATCCACAAGTGCCTGACATTTTATTATTAGAAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATAGTCTGTGTATCCACAAGTGCCTGACATTTTATTATTAGAAAA  892

seq1  AAACACCAAAGAGTAATTGGACATATTCTTAAATTTATTTTAATTTCAGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCAAAGAGTAATTGGACATATTCTTAAATTTATTTTAATTTCAGG  942

seq1  AAAAATATTTTCTCCATTAGGCAATTGGAATATGTCTTTACTTATGATAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTTTCTCCATTAGGCAATTGGAATATGTCTTTACTTATGATAA  992

seq1  AGCTTTGTGTTTAGTGATTATCTCCTTCTGTTTCCTTTAACAATAGGACT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGTGTTTAGTGATTATCTCCTTCTGTTTCCTTTAACAATAGGACT  1042

seq1  CTTCAATGTCCTAGAAATATTCAAAGGAGAGAACCTATTAAGAAACTAGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATGTCCTAGAAATATTCAAAGGAGAGAACCTATTAAGAAACTAGA  1092

seq1  AGAGAATTC  1104
      |||||||||
seq2  AGAGAATTC  1101