BAC Information

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BAC

Clone NameB6Ng01-054M08
Chromosome15 (Build37)
Map Location 70,001,760 - 70,002,788
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383050
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054M08.bB6Ng01-054M08.g
ACCDH877425DH877426
length8411,025
definitionDH877425|Mus musculus domesticus DNA, BAC clone: B6Ng01-054M08, 5' end.DH877426|Mus musculus domesticus DNA, BAC clone: B6Ng01-054M08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtacaccatttttaatagggttatttgtttc
tctggagtctaacttcttgagttctttgtatatattggatattagccctc
tgtcagatttaggattggtaaaaatcttctcccaatctgttggttgccat
ttgttctatggactatctcctttgccttacagaagctttgcaattttatg
aggttccatttgtcaattcttgatcttacagcacatgccattggcgttct
gttcagaaaaatttcccttgtgcccatgtgctcaaggttcttccccattt
tctttactattagtttcattgtatctggttttatgtggaggttcttcaca
cacttggacttgagctttgtacaagaagataagaatgaatcaattcacat
tcttctaactaactaactgccagttgcgccagcaccatttgttgaaaatg
ctgccttttaccccactggatggttttagctcctttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattcagttga
tctacctgtctgtcactgtaccaataccatgcagggtgttgttgttgttg
atgttgttgtttttgttgttattgttgttttgttttgttttgttttttta
tcatgattgctctgtagtatagcatgaagtctgagatgttgattttggcc
agaagttcttttattgctgagaatagttttcactattctgggctttttat
tatttccagatgaatttggaaattgttctttctaatctattgaataattg
aagtcagaattttgattggggattacattaaatctgtagat

gaattctcagttctcaaagcaacatctatatcaccgtcacaacacaaggc
atagggtttattgtggacgagggagagaaaagaatttaagaccaatagac
agtgggtaatggcaagaaaatggtgccttcgggacacatcacagtagtta
catatatgaatccacagcatttgtgacaatatgcaggaaatctggcaatt
ataagccagatgaaatgcaaacttgaagaggagatgttgaataaagtctt
accctgacctgagaagatactgccaattaataggggctggaggagtgaaa
gtctatttaatttaagggtgtgactactggtagattagctatacttccgt
ggaaggacaaacatctaagagtacatggacatacaatgcaagctgaggtc
tgtctgcttcagctgagatgctatacacagcctcttatctgctgctcccc
cacccctgcttcagtagcaattccttttctaccacgaaatacatcaagaa
gaaactaaccatcttgtaagctgctaatgactggctccacaagatcatca
gtgatctgaatggaaacctcgatgatgtcaatcatcattgacctgggtgc
tggcaagctttcagtgttcctgtgtgggggcctgtagttgtttcatttgc
cactcagtgtgcatctcctactgcttgttttgctcctgatataacagaga
agaaagacaagaagaatggggactctatggagtcatatgatgacatgagc
tttgatatgtttgattacatttttgctcccctgtaaatgaagcctttata
tgtacttttaaaaagtatatgacctgtacaaattagacttgatagattac
atattatatattataaatataaactatagacatagattagatgatagaaa
tagagctagagagatatgaagagatagagagagatacaaaagatatgtag
agagatatatataggagaggacatagagttggctatataagtgggagaaa
gcatgatctgagagttcagagaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_70001760_70002788
seq2: B6Ng01-054M08.g_65_1089 (reverse)

seq1  ACCTCTCTGAACTCTCAGATCCATGCTTTCTCCCACTTATATAGCCAACT  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACCTCTCTGAACTCTCAGAT-CATGCTTTCTCCCACTTATATAGCCAACT  49

seq1  CTATGTCCTCTCCCTATATATATCTCTCTACATATCTTTTGTATCTCTCT  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTATGTCCTCT-CCTATATATATCTCTCTACATATCTTTTGTATCTCTCT  98

seq1  CTATCTCTTTCATATCTCTCTAGCTCTATTTCTATCATCTTAATCTATGT  150
      ||||||| ||||||||||||||||||||||||||||||| ||||||||||
seq2  CTATCTC-TTCATATCTCTCTAGCTCTATTTCTATCATC-TAATCTATGT  146

seq1  CTATAGTTTATATTTATAATATATAATATGTAATCTATCAAGTCTAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTTTATATTTATAATATATAATATGTAATCTATCAAGTCTAATTT  196

seq1  GTACAGGTCATATACTTTTTAAAAGTACATATAAAGGCTTCATTTACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGTCATATACTTTTTAAAAGTACATATAAAGGCTTCATTTACAGG  246

seq1  GGAGCAAAAATGTAATCAAACATATCAAAGCTCATGTCATCATATGACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAAAAATGTAATCAAACATATCAAAGCTCATGTCATCATATGACTC  296

seq1  CATAGAGTCCCCATTCTTCTTGTCTTTCTTCTCTGTTATATCAGGAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGTCCCCATTCTTCTTGTCTTTCTTCTCTGTTATATCAGGAGCAA  346

seq1  AACAAGCAGTAGGAGATGCACACTGAGTGGCAAATGAAACAACTACAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCAGTAGGAGATGCACACTGAGTGGCAAATGAAACAACTACAGGC  396

seq1  CCCCACACAGGAACACTGAAAGCTTGCCAGCACCCAGGTCAATGATGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACACAGGAACACTGAAAGCTTGCCAGCACCCAGGTCAATGATGATT  446

seq1  GACATCATCGAGGTTTCCATTCAGATCACTGATGATCTTGTGGAGCCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCATCGAGGTTTCCATTCAGATCACTGATGATCTTGTGGAGCCAGT  496

seq1  CATTAGCAGCTTACAAGATGGTTAGTTTCTTCTTGATGTATTTCGTGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCAGCTTACAAGATGGTTAGTTTCTTCTTGATGTATTTCGTGGTA  546

seq1  GAAAAGGAATTGCTACTGAAGCAGGGGTGGGGGAGCAGCAGATAAGAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGAATTGCTACTGAAGCAGGGGTGGGGGAGCAGCAGATAAGAGGC  596

seq1  TGTGTATAGCATCTCAGCTGAAGCAGACAGACCTCAGCTTGCATTGTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATAGCATCTCAGCTGAAGCAGACAGACCTCAGCTTGCATTGTATG  646

seq1  TCCATGTACTCTTAGATGTTTGTCCTTCCACGGAAGTATAGCTAATCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTACTCTTAGATGTTTGTCCTTCCACGGAAGTATAGCTAATCTAC  696

seq1  CAGTAGTCACACCCTTAAATTAAATAGACTTTCACTCCTCCAGCCCCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTCACACCCTTAAATTAAATAGACTTTCACTCCTCCAGCCCCTAT  746

seq1  TAATTGGCAGTATCTTCTCAGGTCAGGGTAAGACTTTATTCAACATCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGGCAGTATCTTCTCAGGTCAGGGTAAGACTTTATTCAACATCTCC  796

seq1  TCTTCAAGTTTGCATTTCATCTGGCTTATAATTGCCAGATTTCCTGCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAGTTTGCATTTCATCTGGCTTATAATTGCCAGATTTCCTGCATA  846

seq1  TTGTCACAAATGCTGTGGATTCATATATGTAACTACTGTGATGTGTCCCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACAAATGCTGTGGATTCATATATGTAACTACTGTGATGTGTCCCG  896

seq1  AAGGCACCATTTTCTTGCCATTACCCACTGTCTATTGGTCTTAAATTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACCATTTTCTTGCCATTACCCACTGTCTATTGGTCTTAAATTCTT  946

seq1  TTCTCTCCCTCGTCCACAATAAACCCTATGCCTTGTGTTGTGACGGTGAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCCTCGTCCACAATAAACCCTATGCCTTGTGTTGTGACGGTGAT  996

seq1  ATAGATGTTGCTTTGAGAACTGAGAATTC  1029
      |||||||||||||||||||||||||||||
seq2  ATAGATGTTGCTTTGAGAACTGAGAATTC  1025


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