MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-055A01
Chromosome	15 (Build37)
Map Location	49,449,978 - 49,451,152
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Csmd3, EG665146, LOC100039600
Downstream gene	LOC100039539, LOC665160
Link	Open Mouse BAC browser

Click to get alignment info.

name	Csmd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239420 MGI:2386403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665146 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665146 MGI:3643004
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins pseudo : _no_value

name	LOC100039600 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039600
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039539 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039539
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC665160 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Csmd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487116 GeneID:239420 MGI:2386403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CUB and Sushi multiple domains 3 transcript_id : NM_001081391.1

name	Csmd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487117 GeneID:239420 MGI:2386403
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 product : CUB and Sushi multiple domains 3 protein_id : NP_001074860.1

name	LOC100039600 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039600
definition	number : 1 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 1 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 2 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 3 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 4 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 5 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 6 pseudo : _no_value

name	LOC665160 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665160
definition	number : 1 pseudo : _no_value

name	LOC665160 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665160
definition	number : 2 pseudo : _no_value

name	EG665146 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149266578 GeneID:665146 MGI:3643004
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins product : predicted gene, EG665146 pseudo : _no_value transcript_id : XR_035659.1

clone name	MSMg01-522P14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-401K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279K03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-435E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223A19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-055A01.b	B6Ng01-055A01.g
ACC	DH877588	DH877589
length	1,045	1,140
definition	DH877588\|Mus musculus domesticus DNA, BAC clone: B6Ng01-055A01, 5' end.	DH877589\|Mus musculus domesticus DNA, BAC clone: B6Ng01-055A01, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcaaaagagtaaagtaaaatggctgagaaacaaagattattcaa cacccttaaacaccacagaattcaagttatgggagagaaagatttcatct tgcacccataagaagtgctaaagtcaataaaaccaatgtcagctcatgca ggttaggatttaaataacggagaacaacccagtgcttgtgagactggaaa tttgtgtgaagcaactatgaaaattaggttgacagttgctcaggaagatg gaaattgatctaacttaagatccagctataccaccctgagcatattttaa aaagtgcatttcatcctaagacaaagacacttgctcaatcattctaatca ttatacacagacattggaaacaacctagatgaccctctatagaagcatac agaaaaatttcatacatttatacaatgaagtatcatttttaaaaattata caatggggccattaaagagtggcattataaaatttgttgacaaattgagg aataagaaaaaaaaaatcatccgagtgagatatttctgaactggaaatgg aagcatggtgttttcttacatgtagatataagtcattgataaactaccaa ttcacagaaacacaaaaggtaggtatagagtagggatgcatgtctcctta ggaaagtgaaatagaagagattattgtggatggacagagatgggggctgt tgtggaagcatcaagtgtggagggggaggaaattggagtcaggtaactaa aactaagcaacttttcagagaaaatattgaataataatacagtagaagat tcctgaaatatatacatatatgaaggtgatctgtaaaaaactgcaaaata ttgaaagagacagaaccaacagactatctctttttcataaataaaggttc cagtacagggcacatgttatattctattgaagttttgaaaaagaggctcc atgggaatcctaaacacccaggccattccagtcattaggttgttcttaaa gaaagcaggccccattgctgagacatgctattagactcatgacaa	gaattccatgaaaggttttgtgacttttctccttgattggttagttctat ctctaggggtttatttgattctataattccatggggctctggaggctttc cagggtggttgctttctcattctagctacctaattttgcatcaagacaga taaaaaggtggtgcctgtgcctgtgcctgtgcctgtgcctgtgcctgtgc ctgtagctgaccaaaggttactggatctgagttctcatttctgggacaga acaacttaggcctactctcgtgaattgtcagtttgctgcctgtcatagag tcagcctgcctctgactaactcagtcctctcattatgactatacttgcac ctttcttgtggctctaagctcagcaactctattaatattcatgctcacca caaaagaggagtttcaatatagtgaaatatattaaaaatttcaaaacaga tgtctgtagacataaattttgtagcaggagtgaaagtccttgaaaacata gtaattaggaatgcaattgcaaatacaatccaattagagtgtgtgataac ttttactctcacttgttaatagaagagagtaagagtattgttttcagcag aataaacagaatcataataattttgcagtatcatgttgaaattgatgcaa catttgaaaatctatgttattatatataagaaagggaaagctaattttca ttggtttgccagtataaaattcaagatataaaccattccctttatgaaaa atagtgttactatgaaatcgttaatgtatttttgctgagcaaaatatact gaactattggctctctggcagctttctgaactcatttacatagaaataaa aagaataaggcaaggcaagaacaattcccctattttctatagaccttaac aacatctttgtacacactaacattttatttcccttttcaggccatagagc tttgaatctcatactgaaatgttatttcaatcagatgatgtgtagatata tcccatttgttctttaataagaatatgctggttttacactttctgacttt tttgtgctacactatgatgatccatggattttgtctttcagtaaataatt agtccaattgccagagaaggatgagctcagatcatgccca
quality values	Open. Hide. 61 41 28 33 61 61 61 38 23 61 61 61 30 61 37 47 61 61 61 47 55 61 61 61 61 43 61 41 34 37 28 29 18 29 28 28 43 43 61 59 61 59 59 61 61 61 61 59 59 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 44 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 50 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 50 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 53 52 61 61 61 61 61 61 61 53 45 61 47 57 57 50 53 53 57 53 53 53 47 38 53 39 53 57 53 53 57 24 57 57 57 50 40 43 57 57 57 53 52 53 50 57 53 43 33 38 43 45 53 57 53 52 50 50 47 47 52 43 53 53 57 57 57 50 45 53 53 47 47 50 50 30 53 42 34 57 40 52 30 43 45 52 47 41 28 57 52 52 39 57 53 37 37 53 53 57 32 39 42 57 57 57 57 57 40 50 53 31 50 53 45 57 45 36 36 31 53 34 50 40 52 53 50 41 53 42 57 45 37 18 57 43 43 57 41 33 52 38 57 41 30 41 52 53 50 30 50 29 10 15 52 23 36 42 34 31 39 53 46 22 34 50 33 34 32 52 28 27 35 53 33 57 32 38 31 20 38 20 40 53 57 39 30 33 20 18 38 30 36 36 25 52 31 18 36 29 31 40 27 34 32 40 28 33 31 20 41 13 24 33 32 30 41 37 33 37 35 34 36 34 40 26 40 22 48 29 40 37 40 37 29 11 21 20 12 40 33 24 27 40 40 19 38 47 45 44 45 47 30 32 38 23 32 46 45 32 27 28 40 31 38 26 45 31 24 30 20 30 27 17 25 32 24 18 37 11 38 24 13 27 29 29 25 22 29 24 28 25 19 46 47 51 14 20 9 19 13 23 15 8 17 13 18 18 15 5 23 26 22 7 10 20 25 21 12 10 39 37 18 5 10 14 14 22 11 10 18 14 5 5 12 13 9 4 4 6 14 7 36 10 16 41 41 29 18 20 11 16 39 19 7 17 19 14 5 7 12 43 12 10 33 41 23 18 15 11 23 31 33 31 41 41 22 30 12 30 13 15 7 12 24 25 28 29 41 19 13 32 16 27 25 26 28 22 27 27 29 19 16 28 8 19 12 10 11 5 26 9 32 33 26 30 23 9 29 8 26 17 20 28 29 14 29 38 27 16 33 31 30 12 28 6 9 7 25 7 6 6 7 17 18 8 31 7 7 29 11 23 12 18 6 6 6	Open. Hide. 55 55 55 39 61 55 37 26 24 29 32 33 33 49 32 21 52 59 59 59 59 59 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 59 59 59 44 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 61 61 61 55 61 55 61 61 61 61 61 61 61 61 55 61 55 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 53 61 61 53 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 53 53 61 61 53 53 61 61 53 53 61 61 50 61 53 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 53 61 47 61 61 61 61 46 57 57 57 57 53 57 57 53 46 42 51 47 57 53 52 57 57 57 57 57 57 53 53 57 57 57 57 57 50 57 57 53 57 53 38 53 57 53 57 45 57 57 52 57 45 57 53 50 53 57 53 57 53 53 45 40 57 53 38 57 57 53 53 30 43 57 43 45 57 45 52 47 57 57 53 53 53 57 37 41 57 42 53 52 41 45 52 37 41 57 57 57 43 50 47 47 50 50 50 53 50 57 57 53 57 47 57 57 41 47 57 57 40 29 57 50 50 45 46 42 53 57 57 41 50 45 43 26 38 53 53 45 53 52 41 38 45 41 47 45 53 42 57 50 52 30 57 32 28 27 20 25 33 29 38 38 38 47 39 39 24 38 42 57 57 53 44 36 53 52 46 37 41 57 52 37 35 53 30 35 42 42 44 36 57 57 53 33 41 37 25 27 34 40 29 31 33 30 53 31 29 20 27 31 52 30 53 46 36 52 53 44 34 34 40 57 57 57 57 37 48 40 35 40 27 35 25 37 33 35 33 37 53 57 40 32 44 31 35 33 33 23 26 43 18 29 28 51 51 46 47 29 32 37 30 44 14 38 39 51 51 30 30 34 38 35 31 30 44 31 33 29 29 30 30 25 43 26 23 29 32 29 28 29 30 29 24 28 23 29 29 51 38 28 33 31 33 38 37 33 29 28 48 51 38 28 30 25 36 28 28 33 51 27 28 29 51 51 51 29 24 29 32 29 27 7 8 11 12 13 18 43 30 14 33 28 29 32 24 30 23 33 33 28 28 46 29 28 9 9 5 41 28 33 21 26 27 23 29 26 27 24 29 26 16 28 33 38 22 17 22 15 31 29 22 41 29 34 21 41 14 14 23 11 28 34 27 27 18 18 31 46 46 33 23 25 51 25 27 51 21 28 51 51 14 32 13 22 28 19 23 16 29 33 19 24 23 31 29 51 28 17 36 38 18 16 18 30 15 22 19 22 36 20 21 51 19 13 16 5 8 12 18 51 28 15 15 27 20 20 9 8 29 15 19 33 22 30 20 9 12 24 9 23 8 9 12 17 33 9 30 23 26 31 38 17 16 16 28 10 9 35 14 23 26 9 8 26 4 24 16 12 9 26 10 13 23 23 22 18 42 42 5 23 8 7 8 27 22 12 30 29 26 17 18 29 29 36 42 14 10 8 6 12 20 18 6 7 9 9 26 11 6 7 23 4 6 8 7 14 7 6 4 14 12 12 8 30 31 18 7 4 7 10 32 9 19 24 11 4 13 35 7 20 6 3 4 15 10 21 12 5 7 5 5 22 14 10 15 9 4 4 17 4 9 20 4 17 9 4 7 4 4 9 16 11 4 10 4 4 15 3 7 12 10 13 3 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr15_49449978_49451152
seq2: B6Ng01-055A01.g_60_1199

seq1  GAATTCCATGAAAGGTTTTGTGACTTTTCTCCTTGATTGGTTAGTTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAAAGGTTTTGTGACTTTTCTCCTTGATTGGTTAGTTCTAT  50

seq1  CTCTAGGGGTTTATTTGATTCTATAATTCCATGGGGCTCTGGAGGCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGGGTTTATTTGATTCTATAATTCCATGGGGCTCTGGAGGCTTTC  100

seq1  CAGGGTGGTTGCTTTCTCATTCTAGCTACCTAATTTTGCATCAAGACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTGGTTGCTTTCTCATTCTAGCTACCTAATTTTGCATCAAGACAGA  150

seq1  TAAAAAGGTGGTGCCTGTGCCTGTGCCTGTGCCTGTGCCTGTGCCTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGGTGGTGCCTGTGCCTGTGCCTGTGCCTGTGCCTGTGCCTGTGC  200

seq1  CTGTAGCTGACCAAAGGTTACTGGATCTGAGTTCTCATTTCTGGGACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCTGACCAAAGGTTACTGGATCTGAGTTCTCATTTCTGGGACAGA  250

seq1  ACAACTTAGGCCTACTCTCGTGAATTGTCAGTTTGCTGCCTGTCATAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTAGGCCTACTCTCGTGAATTGTCAGTTTGCTGCCTGTCATAGAG  300

seq1  TCAGCCTGCCTCTGACTAACTCAGTCCTCTCATTATGACTATACTTGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTGCCTCTGACTAACTCAGTCCTCTCATTATGACTATACTTGCAC  350

seq1  CTTTCTTGTGGCTCTAAGCTCAGCAACTCTATTAATATTCATGCTCACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGTGGCTCTAAGCTCAGCAACTCTATTAATATTCATGCTCACCA  400

seq1  CAAAAGAGGAGTTTCAATATAGTGAAATATATTAAAAATTTCAAAACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAGGAGTTTCAATATAGTGAAATATATTAAAAATTTCAAAACAGA  450

seq1  TGTCTGTAGACATAAATTTTGTAGCAGGAGTGAAAGTCCTTGAAAACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTAGACATAAATTTTGTAGCAGGAGTGAAAGTCCTTGAAAACATA  500

seq1  GTAATTAGGAATGCAATTGCAAATACAATCCAATTAGAGTGTGTGATAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTAGGAATGCAATTGCAAATACAATCCAATTAGAGTGTGTGATAAC  550

seq1  TTTTACTCTCACTTGTTAATAGAAGAGAGTAAGAGTATTGTTTTCAGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTCTCACTTGTTAATAGAAGAGAGTAAGAGTATTGTTTTCAGCAG  600

seq1  AATAAACAGAATCATAATAATTTTGCAGTATCATGTTGAAATTGATGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACAGAATCATAATAATTTTGCAGTATCATGTTGAAATTGATGCAA  650

seq1  CATTTGAAAATCTATGTTATTATATATAAGAAAGGGAAAGCTAATTTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAAAATCTATGTTATTATATATAAGAAAGGGAAAGCTAATTTTCA  700

seq1  TTGGTTTGCCAGTATAAAATTCAAGATATAAACCATTCCCTTTATGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTGCCAGTATAAAATTCAAGATATAAACCATTCCCTTTATGAAAA  750

seq1  ATAGTGTTACTATGAAATCGTTAATGTATTTTTGCTGAGCAAAATATACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTTACTATGAAATCGTTAATGTATTTTTGCTGAGCAAAATATACT  800

seq1  GAACTATTGGCTCTCTGGCAGCTTTCTGAACTCATTTACATAGAAATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATTGGCTCTCTGGCAGCTTTCTGAACTCATTTACATAGAAATAAA  850

seq1  AAGAATAAGGGCAAGGCAAGAACAATTCCCCTATTTTCTATAGACCTTAA  900
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAA-GGCAAGGCAAGAACAATTCCCCTATTTTCTATAGACCTTAA  899

seq1  CAACATCTTTGTAACAACACTAACATTTTATTTCCCTTTTCCAGGCCATA  950
      |||||||||||||   |||||||||||||||||||||||| |||||||||
seq2  CAACATCTTTGTA--CACACTAACATTTTATTTCCCTTTT-CAGGCCATA  946

seq1  GAGCTTTGAAATCTCATACTTGAAATGTATATTTCAATCAGATGAATGTT  1000
      |||||||| |||||||||| |||||||| ||||||||||||||| ||| |
seq2  GAGCTTTG-AATCTCATAC-TGAAATGT-TATTTCAATCAGATG-ATG-T  991

seq1  GTAGAATTAATTATTCCCATTTGTTTCTTTAAATAAAAATATTGCTGGTT  1050
      |||||  ||     ||||||||| |||||| ||||| |||| ||||||||
seq2  GTAGATATA-----TCCCATTTG-TTCTTT-AATAAGAATA-TGCTGGTT  1033

seq1  TTAACACTTTTCTTGAC-TTTTTGTGCTACACTTATGAATGATCACATGG  1099
      || |||||||   |||| |||||||||||||| |||| |||||| |||||
seq2  TT-ACACTTT--CTGACTTTTTTGTGCTACAC-TATG-ATGATC-CATGG  1077

seq1  ATTTTTGTCTTTCAAGTAAAATTACATTAGGTTCCAATTTGCCAGAAGAA  1149
      | ||||||||||| ||||||  || |||||  ||||| ||||||| ||||
seq2  A-TTTTGTCTTTC-AGTAAA--TA-ATTAG--TCCAA-TTGCCAG-AGAA  1118

seq1  GGAGTGAGCTTCAGGAATCATGCCCA  1175
      ||| ||||| ||||  ||||||||||
seq2  GGA-TGAGC-TCAG--ATCATGCCCA  1140

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information