BAC Information

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BAC

Clone NameB6Ng01-055O24
Chromosome15 (Build37)
Map Location 69,491,912 - 69,612,827
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665945, EG633752, Khdrbs3
Downstream geneLOC383050
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055O24.bB6Ng01-055O24.g
ACCDH878248DH878249
length8631,089
definitionDH878248|Mus musculus domesticus DNA, BAC clone: B6Ng01-055O24, 5' end.DH878249|Mus musculus domesticus DNA, BAC clone: B6Ng01-055O24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,611,965 - 69,612,827)(69,491,912 - 69,493,002)
sequence
gaattccatttctatagatttactaatatgtatgtagattgatgtcaagg
gaaaataccatttgggaaaaattttatgtttgaatattatctgtaaaaat
atttatctacatttgtgtgaatgtgtagcaacttttaattggcaaatgat
gtttaatatctcaaatatgcaatgcctcttacattagtttcaaaataaat
actaaaaaaattaactgataacttgtctagaaaaagactggaaaaggcaa
aggctagttgagaaaagatgtagaattggtgatgtaggaagaagaacagc
agggatgtttcccacgtagtattgtgattagtcacaccactctatttgac
cacatacttcccttcaccacttccacagtatggttacacttagtgatagg
acccatgaatgctcaatgaatgcactgacacctgttaccaagatctgctt
atgaggtttgatgtgcagggctatgattagctcaaatccatataagggct
gcagatgcaaaaccaaaggagatttcccacaaccttctccagcaatactt
ccattgtgctcaactgtcaccagattgtcactttggaccaacattgtttt
cctgttttgactttatcagtacgaaatctttcaaccatttaggacagtga
agttcattaagagttcccaggtgagacttaaaaacatttacattttggta
ggagggatggctccatggttaagagcactacagcaaccacatggtggctc
aaagccatcagtaatgggatctgatgccctcttcacatatactagataga
tacatagatagatagatagatagatagatagatagatagatagatagata
gatagatagatag
gaattctttgtttagctctgagtcccatcttttaatggggttatttgatt
ttctggagtccaccctcttgagttctttatatatattggaaggctttctt
atcagttctggtttttagaatattgaaaaaaatcagatttactgttttaa
gaattagaagaaataagcatattatattctaaagttgcttgtattatgta
atttagtttgtaagacatatcccaataagttatgagctagttaaggcaga
agccatgtgtcagttgtctttaagtctacattgtcttgcagaatacctag
actatagtaggtactcaatgaaatattattaatgacaagtaacagcaatg
tctgttataatatattattggtttctcccctaacatatatatgtttgtat
agtatcttgcttttggaagatgtctaatctttgtcctttaaccatttaca
gattttagtaagcaaaatgggatgttacataacctatattatgccattca
tatagatactttactgctagtgagttcttaaggctactgcatcttattac
ttttctttctttttttattatgtattttcctcgtttacatttccaatgct
atcccaaaagtcccccatatccaccctcacaatcccctacccacccattc
cccctttttggccctggcgttcccctgtaccggggcatataaagtttgca
agtccaatgggcctctcttacttcaatgaactttgactttctcaatgaca
agaatgttcttattcaaacaaatttattctacggaatctttgtagactcc
atctacatttgtcaaatatatacctgctggcattctatatatttttaaat
gattgaaaaagagttatttcagtggaatatattataggcagtgtatttta
ggctgaaattcatgaatctattcttaaatagggaaatagtttttatccaa
catagaaacagtctatccccttaaaggaataactactcatgatatgtact
gaccttgcagggtcaaggtgttttttgttatatcgagtgctgattggacg
atttatttattgattcatgcgcatttagaaaagtaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_69611965_69612827
seq2: B6Ng01-055O24.b_49_911 (reverse)

seq1  CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT  50

seq1  ATCTATCTATGTATCTATCTAGTATATGTGAAGAGGGCATCAGATCCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATGTATCTATCTAGTATATGTGAAGAGGGCATCAGATCCCAT  100

seq1  TACTGATGGCTTTGAGCCACCATGTGGTTGCTGTAGTGCTCTTAACCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATGGCTTTGAGCCACCATGTGGTTGCTGTAGTGCTCTTAACCATG  150

seq1  GAGCCATCCCTCCTACCAAAATGTAAATGTTTTTAAGTCTCACCTGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCCCTCCTACCAAAATGTAAATGTTTTTAAGTCTCACCTGGGAA  200

seq1  CTCTTAATGAACTTCACTGTCCTAAATGGTTGAAAGATTTCGTACTGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAATGAACTTCACTGTCCTAAATGGTTGAAAGATTTCGTACTGATA  250

seq1  AAGTCAAAACAGGAAAACAATGTTGGTCCAAAGTGACAATCTGGTGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAAACAGGAAAACAATGTTGGTCCAAAGTGACAATCTGGTGACAG  300

seq1  TTGAGCACAATGGAAGTATTGCTGGAGAAGGTTGTGGGAAATCTCCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCACAATGGAAGTATTGCTGGAGAAGGTTGTGGGAAATCTCCTTTG  350

seq1  GTTTTGCATCTGCAGCCCTTATATGGATTTGAGCTAATCATAGCCCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCATCTGCAGCCCTTATATGGATTTGAGCTAATCATAGCCCTGCA  400

seq1  CATCAAACCTCATAAGCAGATCTTGGTAACAGGTGTCAGTGCATTCATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAACCTCATAAGCAGATCTTGGTAACAGGTGTCAGTGCATTCATTG  450

seq1  AGCATTCATGGGTCCTATCACTAAGTGTAACCATACTGTGGAAGTGGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCATGGGTCCTATCACTAAGTGTAACCATACTGTGGAAGTGGTGA  500

seq1  AGGGAAGTATGTGGTCAAATAGAGTGGTGTGACTAATCACAATACTACGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGTATGTGGTCAAATAGAGTGGTGTGACTAATCACAATACTACGT  550

seq1  GGGAAACATCCCTGCTGTTCTTCTTCCTACATCACCAATTCTACATCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACATCCCTGCTGTTCTTCTTCCTACATCACCAATTCTACATCTTT  600

seq1  TCTCAACTAGCCTTTGCCTTTTCCAGTCTTTTTCTAGACAAGTTATCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACTAGCCTTTGCCTTTTCCAGTCTTTTTCTAGACAAGTTATCAGT  650

seq1  TAATTTTTTTAGTATTTATTTTGAAACTAATGTAAGAGGCATTGCATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTTTAGTATTTATTTTGAAACTAATGTAAGAGGCATTGCATATT  700

seq1  TGAGATATTAAACATCATTTGCCAATTAAAAGTTGCTACACATTCACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATATTAAACATCATTTGCCAATTAAAAGTTGCTACACATTCACACA  750

seq1  AATGTAGATAAATATTTTTACAGATAATATTCAAACATAAAATTTTTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGATAAATATTTTTACAGATAATATTCAAACATAAAATTTTTCCC  800

seq1  AAATGGTATTTTCCCTTGACATCAATCTACATACATATTAGTAAATCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTATTTTCCCTTGACATCAATCTACATACATATTAGTAAATCTAT  850

seq1  AGAAATGGAATTC  863
      |||||||||||||
seq2  AGAAATGGAATTC  863

seq1: chr15_69491912_69493002
seq2: B6Ng01-055O24.g_66_1154

seq1  GAATTCTTTGTTTAGCTCTGAGTCCCATCTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGAGTCCCATCTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGGAGTCCACCCTCTTGAGTTCTTTATATATATTGGAAGGCTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCACCCTCTTGAGTTCTTTATATATATTGGAAGGCTTTCTT  100

seq1  ATCAGTTCTGGTTTTTAGAATATTGAAAAAAATCAGATTTACTGTTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTCTGGTTTTTAGAATATTGAAAAAAATCAGATTTACTGTTTTAA  150

seq1  GAATTAGAAGAAATAAGCATATTATATTCTAAAGTTGCTTGTATTATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGAAGAAATAAGCATATTATATTCTAAAGTTGCTTGTATTATGTA  200

seq1  ATTTAGTTTGTAAGACATATCCCAATAAGTTATGAGCTAGTTAAGGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTTTGTAAGACATATCCCAATAAGTTATGAGCTAGTTAAGGCAGA  250

seq1  AGCCATGTGTCAGTTGTCTTTAAGTCTACATTGTCTTGCAGAATACCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGTGTCAGTTGTCTTTAAGTCTACATTGTCTTGCAGAATACCTAG  300

seq1  ACTATAGTAGGTACTCAATGAAATATTATTAATGACAAGTAACAGCAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAGTAGGTACTCAATGAAATATTATTAATGACAAGTAACAGCAATG  350

seq1  TCTGTTATAATATATTATTGGTTTCTCCCCTAACATATATATGTTTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTATAATATATTATTGGTTTCTCCCCTAACATATATATGTTTGTAT  400

seq1  AGTATCTTGCTTTTGGAAGATGTCTAATCTTTGTCCTTTAACCATTTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTTGCTTTTGGAAGATGTCTAATCTTTGTCCTTTAACCATTTACA  450

seq1  GATTTTAGTAAGCAAAATGGGATGTTACATAACCTATATTATGCCATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAGTAAGCAAAATGGGATGTTACATAACCTATATTATGCCATTCA  500

seq1  TATAGATACTTTACTGCTAGTGAGTTCTTAAGGCTACTGCATCTTATTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATACTTTACTGCTAGTGAGTTCTTAAGGCTACTGCATCTTATTAC  550

seq1  TTTTCTTTCTTTTTTTATTATGTATTTTCCTCGTTTACATTTCCAATGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCTTTTTTTATTATGTATTTTCCTCGTTTACATTTCCAATGCT  600

seq1  ATCCCAAAAGTCCCCCATATCCACCCTCACAATCCCCTACCCACCCATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAAAGTCCCCCATATCCACCCTCACAATCCCCTACCCACCCATTC  650

seq1  CCCCTTTTTGGCCCTGGCGTTCCCCTGTACCGGGGCATATAAAGTTTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTTTGGCCCTGGCGTTCCCCTGTACCGGGGCATATAAAGTTTGCA  700

seq1  AGTCCAATGGGCCTCTCTTACTTCAATGAACTTTGACTTTCTCAATGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAATGGGCCTCTCTTACTTCAATGAACTTTGACTTTCTCAATGACA  750

seq1  AGAATGTTCTTATTCAAACAAATTTATTCTACGGAATCTTTGTAGACTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTTCTTATTCAAACAAATTTATTCTACGGAATCTTTGTAGACTCC  800

seq1  ATCTACATTTGTCAAATATATACCTGCTGGCATTCTATATATTTTTAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACATTTGTCAAATATATACCTGCTGGCATTCTATATATTTTTAAAT  850

seq1  GATTGAAAAAAGAGTTATTTCAGTGGAATATATTATAGGCAGTGTATTTT  900
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTG-AAAAAGAGTTATTTCAGTGGAATATATTATAGGCAGTGTATTTT  899

seq1  AGGCTGAAATTCATGAATCTATTCTTAAATAGGGAAATAGTTTTTATCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAAATTCATGAATCTATTCTTAAATAGGGAAATAGTTTTTATCCA  949

seq1  ACATAGAAACAGTCTATCCCCTT-AAGGAATAACTAACTCATGATAATGT  999
      ||||||||||||||||||||||| ||||||||||| ||||||||| ||||
seq2  ACATAGAAACAGTCTATCCCCTTAAAGGAATAACT-ACTCATGAT-ATGT  997

seq1  ACTGACCTTGCAGTGTC-AGGTG-TTTTTGTTATATCGAGTGCTGATT-G  1046
      ||||||||||||| ||| ||||| |||||||||||||||||||||||| |
seq2  ACTGACCTTGCAGGGTCAAGGTGTTTTTTGTTATATCGAGTGCTGATTGG  1047

seq1  ACGATTGTATTATTGATTCCATGCGCCATTTAGAATAGTTAATTT  1091
      ||||||   ||||||||| |||||| ||||||||| || ||||||
seq2  ACGATTTATTTATTGATT-CATGCG-CATTTAGAAAAG-TAATTT  1089