BAC Information

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BAC

Clone NameB6Ng01-057M22
Chromosome15 (Build37)
Map Location 97,990,932 - 97,991,663
singlet/doubletsinglet
Overlap genenone
Upstream geneAmigo2, BC038822, LOC100043354, LOC100042774, D15Ertd682e, Pp11r, Rapgef3, 4930570C03Rik, Hdac7a, Vdr, Tmem106c, Col2a1, Senp1, Pfkm, Asb8
Downstream geneAI836003, Olfr288, LOC634104, EG629524, H1fnt, Zfp641, Olfr285, Olfr284, Olfr283, 1700031M16Rik, LOC100042818, Olfr282, LOC629549, Olfr281, Olfr240-ps1, GA_x5J8B7W76D0-7895713-7896429, Lalba, Olfr234, Olfr278-ps1, 2310037I24Rik, LOC100043418, Ccnt1, 4930415O20Rik, Adcy6, Cacnb3, Ddx23, Rnd1, Ccdc65, Fkbp11, Arf3, 5830427D03Rik, Wnt10b, Wnt1, Ddn, Prkag1, Mll2, Rhebl1, Dhh, Lmbr1l, Tuba1b, Tuba1a, EG668092, Tuba1c, Prph1, Troap, C1ql4, 2810451A06Rik, Spats2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057M22.bB6Ng01-057M22.g
ACCDH879564DH879565
length235735
definitionDH879564|Mus musculus domesticus DNA, BAC clone: B6Ng01-057M22, 5' end.DH879565|Mus musculus domesticus DNA, BAC clone: B6Ng01-057M22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agcttagtaacaattataaaaatgtctacctaaagagaatggctatacaa
ttaattctagatatttcctctctgttccaattatgaccatttctaaattc
cctagaaagacaacctataataaccccctccagccctaaagcccagggaa
ctggggcatcgactcttcataacttcttcaagctgaatatgggcattgcc
atatcttttcgtgcagggtgggggagggagggttt
gaattccatagaaagcaagtcaataactaagtctgacgagacagagtgtt
ggagaatgtgcaggtactggctggatcagcgctttcctccctgagttgct
ttggtcatagtgagtcaacgaaggaaccctaactaagacagcgggctacg
agaactttcactctcttggttgatcggcagtgcgtttaccactggagagc
tgaagactacgattcagcaaatccagccatgcataaagtttagaggacta
aacctgtgttataaacaccaggagacacacaccaggataacccacagcag
gactgcctcagcaggagcactccctaacaggagagtgtggataaaataca
aggtgggagagtgggagaagtcatttctctcatcacccctgccctgcccc
catccggccccaccctgaagccccaccaagagcttgttgtctggttatct
gatcccaaatggtcagccctgaaaatatacagataagtaacagtatacag
actgagctggttgtgcttacacacacacacacacacacacacacacacac
acacacacacacctatttgaaaaacagggagggccgggaacttgaaagag
agtaaaggagccgtatgggaggctttggaggaaggacgggggagggggaa
aggatgtgattacaatctcagaaataacacaatacggtggaacttgtgta
atagcacacaggtggacaacgagggcacacaaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_97990932_97991663
seq2: B6Ng01-057M22.g_72_806

seq1  GAATTCCATAGAAAGCAAGTCAATAACTAAGTCTGACGAGACAGAGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGAAAGCAAGTCAATAACTAAGTCTGACGAGACAGAGTGTT  50

seq1  GGAGAATGTGCAGGTACTGGCTGGATCAGCGCTTTCCTCCCTGAGTTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATGTGCAGGTACTGGCTGGATCAGCGCTTTCCTCCCTGAGTTGCT  100

seq1  TTGGTCATAGTGAGTCAACGAAGGAACCCTAACTAAGACAGCGGGCTACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATAGTGAGTCAACGAAGGAACCCTAACTAAGACAGCGGGCTACG  150

seq1  AGAACTTTCACTCTCTTGGTTGATCGGCAGTGCGTTTACCACTGGAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTTCACTCTCTTGGTTGATCGGCAGTGCGTTTACCACTGGAGAGC  200

seq1  TGAAGACTACGATTCAGCAAATCCAGCCATGCATAAAGTTTAGAGGACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACTACGATTCAGCAAATCCAGCCATGCATAAAGTTTAGAGGACTA  250

seq1  AACCTGTGTTATAAACACCAGGAGACACACACCAGGATAACCCACAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTGTTATAAACACCAGGAGACACACACCAGGATAACCCACAGCAG  300

seq1  GACTGCCTCAGCAGGAGCACTCCCTAACAGGAGAGTGTGGATAAAATACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCCTCAGCAGGAGCACTCCCTAACAGGAGAGTGTGGATAAAATACA  350

seq1  AGGTGGGAGAGTGGGAGAAGTCATTTCTCTCATCACCCCTGCCCTGCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGAGAGTGGGAGAAGTCATTTCTCTCATCACCCCTGCCCTGCCCC  400

seq1  CATCCGGCCCCACCCTGAAGCCCCACCAAGAGCTTGTTGTCTGGTTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCGGCCCCACCCTGAAGCCCCACCAAGAGCTTGTTGTCTGGTTATCT  450

seq1  GATCCCAAATGGTCAGCCCTGAAAATATACAGATAAGTAACAGTATACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCAAATGGTCAGCCCTGAAAATATACAGATAAGTAACAGTATACAG  500

seq1  ACTGAGCTGGTTGTGCTTACACACACACACACACACACACACACACACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCTGGTTGTGCTTACACACACACACACACACACACACACACACAC  550

seq1  ACACACACACACCTATTTGAAAAACAGGGAGGGCCGGGAACTTGAAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACCTATTTGAAAAACAGGGAGGGCCGGGAACTTGAAAGAG  600

seq1  AGTAAAGGAGCCGTATGGGAGGCTTTGGAGGAAGGAC-GGGGAGGGGGAA  649
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGTAAAGGAGCCGTATGGGAGGCTTTGGAGGAAGGACGGGGGAGGGGGAA  650

seq1  AGGATGTGATTACAATCTCAGAAATAACACAATACGGT-GAACTTGTGTA  698
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGGATGTGATTACAATCTCAGAAATAACACAATACGGTGGAACTTGTGTA  700

seq1  ATAGCACACAGCAGGACAACGA-GGCACACAAACC  732
      |||||||||||  ||||||||| ||||||||||||
seq2  ATAGCACACAGGTGGACAACGAGGGCACACAAACC  735