BAC Information

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BAC

Clone NameB6Ng01-059P13
Chromosome15 (Build37)
Map Location 20,384,274 - 20,385,395
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666875, LOC621884, LOC100040265
Downstream geneAcot10, LOC100040302, Cdh12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059P13.bB6Ng01-059P13.g
ACCDH881091DH881092
length1,1131,164
definitionDH881091|Mus musculus domesticus DNA, BAC clone: B6Ng01-059P13, 5' end.DH881092|Mus musculus domesticus DNA, BAC clone: B6Ng01-059P13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgctacatttggagctggagccatgggttccctccatatgta
ctacttggttggtggtttagtccctgggagtgcagggctatggattggtt
gatacaggcacttctaatggcatgaaaaccaatcagagatcttgcattca
ttggtggtcccatagagtataatagagaaccaaattcactggtgtccaga
aatatagatttgtagctaccataggtttatactagtttgtggtattgctg
ttttaaaaataatcatatatttctagaaatataaaataattattttggtg
cataatattgtatattgatacatatttgttactggactttgcttttaact
tctaatttatagcataattgttttacttaaacagtgtttatattgaagtc
tatgttgttgtatcctggcagcaactgcctgtattttatgtttcttgcct
tttgtgagtccctcaaaaggaccatgcactgctgacttgacgtacactat
ctagttttttctaagtatattttacaagttttgcacaacagtgatattcc
ctaaaggtttatttctcagaatgcatctttgtccttaagcatgtctgtat
atctacaatgaaatattcttctggggctttgtgaatcaatatttccatga
agttttgccatttctgcaagggatgtgattgctcgcagattttaaagtaa
gatttaactccattccctctcttccttaattacaggcagtgggacatgag
gtaaagagtgaagcataagcttttggcagggctgggatatatgttagtta
agcgagactgagaaggctgagataaaattctgtaatcagccatagcttca
caggaagaaattttagttttcataatactttttcagcatatgtgttatgc
tgtctatgaaaggaagacattcactgccagtagatcctgatagatgaatc
ttcatcttgtagtctgtgatgagcatggctatgggatactgaattaatag
ggaaaagcttaacagaattataggatgtttgttctctaatacttcaataa
gtctataatgtcatttaaaagtactttgccatcctacattttctaataag
aacattgagtaaa
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaggatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggaatgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagattttggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatagccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacgctagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagactatgcccgggccctagcaa
acacagaagtggatgctcacagtcagctaatggatggatcatagggcttc
taatggaggagctagaggaagtagccaggagctaaagggatctgcaacct
tatagtggacacattatgaactacagtaccccgagttcttgactctagct
gcattaatatcaaagatggctagtcgcatcctgcgagagcccatggactt
gcatcttaatggcctagtaggggatcacaggccaaaaggggaagtgtgtg
caggggatgtgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_20384274_20385395
seq2: B6Ng01-059P13.b_50_1162

seq1  GAATTCTCTGCTACATTTGGAGCTGGAGCCATGGGTTCCCTCCATATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCTACATTTGGAGCTGGAGCCATGGGTTCCCTCCATATGTA  50

seq1  CTACTTGGTTGGTGGTTTAGTCCCTGGGAGTGCAGGGCTATGGATTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTGGTTGGTGGTTTAGTCCCTGGGAGTGCAGGGCTATGGATTGGTT  100

seq1  GATACAGGCACTTCTAATGGCATGAAAACCAATCAGAGATCTTGCATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGGCACTTCTAATGGCATGAAAACCAATCAGAGATCTTGCATTCA  150

seq1  TTGGTGGTCCCATAGAGTATAATAGAGAACCAAATTCACTGGTGTCCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGTCCCATAGAGTATAATAGAGAACCAAATTCACTGGTGTCCAGA  200

seq1  AATATAGATTTGTAGCTACCATAGGTTTATACTAGTTTGTGGTATTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGATTTGTAGCTACCATAGGTTTATACTAGTTTGTGGTATTGCTG  250

seq1  TTTTAAAAATAATCATATATTTCTAGAAATATAAAATAATTATTTTGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAATAATCATATATTTCTAGAAATATAAAATAATTATTTTGGTG  300

seq1  CATAATATTGTATATTGATACATATTTGTTACTGGACTTTGCTTTTAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATATTGTATATTGATACATATTTGTTACTGGACTTTGCTTTTAACT  350

seq1  TCTAATTTATAGCATAATTGTTTTACTTAAACAGTGTTTATATTGAAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTATAGCATAATTGTTTTACTTAAACAGTGTTTATATTGAAGTC  400

seq1  TATGTTGTTGTATCCTGGCAGCAACTGCCTGTATTTTATGTTTCTTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGTTGTATCCTGGCAGCAACTGCCTGTATTTTATGTTTCTTGCCT  450

seq1  TTTGTGAGTCCCTCAAAAGGACCATGCACTGCTGACTTGACGTACACTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAGTCCCTCAAAAGGACCATGCACTGCTGACTTGACGTACACTAT  500

seq1  CTAGTTTTTTCTAAGTATATTTTACAAGTTTTGCACAACAGTGATATTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTTTCTAAGTATATTTTACAAGTTTTGCACAACAGTGATATTCC  550

seq1  CTAAAGGTTTATTTCTCAGAATGCATCTTTGTCCTTAAGCATGTCTGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGTTTATTTCTCAGAATGCATCTTTGTCCTTAAGCATGTCTGTAT  600

seq1  ATCTACAATGAAATATTCTTCTGGGGCTTTGTGAATCAATATTTCCATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACAATGAAATATTCTTCTGGGGCTTTGTGAATCAATATTTCCATGA  650

seq1  AGTTTTGCCATTTCTGCAAGGGATGTGATTGCTCGCAGATTTTAAAGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGCCATTTCTGCAAGGGATGTGATTGCTCGCAGATTTTAAAGTAA  700

seq1  GATTTAACTCCATTCCCTCTCTTCCTTAATTACAGGCAGTGGGACATGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAACTCCATTCCCTCTCTTCCTTAATTACAGGCAGTGGGACATGAG  750

seq1  GTAAAGAGTGAAGCATAAGCTTTTGGCAGGGCTGGGATATATGTTAGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAGTGAAGCATAAGCTTTTGGCAGGGCTGGGATATATGTTAGTTA  800

seq1  AGCGAGACTGAGAAGGCTGAGATAAAATTCTGTAATCAGCCATAGCTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGACTGAGAAGGCTGAGATAAAATTCTGTAATCAGCCATAGCTTCA  850

seq1  CAGGAAGAAATTTTAGTTTTCATAATACTTTTTCAGCATATGTGTTATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGAAATTTTAGTTTTCATAATACTTTTTCAGCATATGTGTTATGC  900

seq1  TGTCTATGAAAGGAAGACATTCACTGCCAGGTAGATCCTGATAGAATGAA  950
      ||||||||||||||||||||||||||||| |||||||||||||| |||||
seq2  TGTCTATGAAAGGAAGACATTCACTGCCA-GTAGATCCTGATAG-ATGAA  948

seq1  TCTTCATCTTGTAGTCATGTGATTGAGCATGGCTATGGGAATACTGAATT  1000
      |||||||||||||||| ||||| |||||||||||||||| |||||||| |
seq2  TCTTCATCTTGTAGTC-TGTGA-TGAGCATGGCTATGGG-ATACTGAA-T  994

seq1  TAATAGGGTAAAAGCTTAACAGGAATTATAGGATGTTTGTTCTCTAATAC  1050
      |||||||| |||||||||||| ||||||||||||||||||||||||||||
seq2  TAATAGGG-AAAAGCTTAACA-GAATTATAGGATGTTTGTTCTCTAATAC  1042

seq1  ATTCAAT-AGTCTATATTGTCATTTAAAAAGTACTTTGCATTCCTACATT  1099
       |||||| |||||||| |||||||| |||||||||||||  |||||||||
seq2  -TTCAATAAGTCTATAATGTCATTT-AAAAGTACTTTGCCATCCTACATT  1090

seq1  TCTTAATAAGAACAATGAGTAAA  1122
      |  ||||||||||| ||||||||
seq2  TTCTAATAAGAACATTGAGTAAA  1113