BAC Information

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BAC

Clone NameB6Ng01-060H23
Chromosome15 (Build37)
Map Location 12,456,166 - 12,609,646
singlet/doubletdoublet
Overlap genePdzd2, LOC100040109
Upstream geneLOC100039772, Npr3, LOC381002, Sub1, LOC100040027, Zfr, LOC100040052, LOC100040066, Mtmr12, LOC100039846, Golph3
Downstream gene6030458C11Rik, Rnasen, Cdh6, LOC100039907, LOC666686, LOC239338
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060H23.bB6Ng01-060H23.g
ACCDH881455DH881456
length1,086904
definitionDH881455|Mus musculus domesticus DNA, BAC clone: B6Ng01-060H23, 5' end.DH881456|Mus musculus domesticus DNA, BAC clone: B6Ng01-060H23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,608,556 - 12,609,646)(12,456,166 - 12,457,025)
sequence
gaattccattcacactagttaaaaatgaacacacacacatgttgttttat
aaacagaactgaattcaaaaggtaaaaagcaagtgagaatgggggagaat
gtttgcatagcacatccccttggacataaataaacctggattgtagccta
tggatgaggaatatgcattgtatgtcagtcacatcccttccagaagttca
ctttctgccctgcaaggaagcataaaagcatacatagcacatggacgatg
gctacaggctaggtggctgatgaatatgcaccaagaggagacagaaaaag
aagctggttttaaagactatctgggatttaggaagatagaaatttcccag
gggtgtgcttagtatattacaaatatcaattaaaatttccttacgataag
cctgcttatttgccattaaaggcaagtggactctacatacatacatacat
acatacatacatacatacatacacacatacatacacatttgatcctagta
ttaacatgtggaaggagcaaatagggttgagggttgtcctatgatctctg
tgagggttctgtgatatgcacgtgagtgtacacacacacataagcacaca
cacacactttaaatcataaaattctttaaaaaatatttttatatttgctc
agtgtcgggggggggagtatgtgctacaacacatatgcataggtcagagg
acagtttgtaggactcggccctccccttctctcatgtcaagttgcaggca
gtgaactcaggccatcaggtgccttttgcagctaaggcagtggttctcaa
ccttcctaatgctatgaccctttaatacagttccttacattgtggtgccc
ccccccaccataacattattttcattgctactgtataactgtaattttgc
tgctgttaggagtcataatgtaaatatttttggagatagtgtttgccaaa
aaagacatgaccacagatttgagactgctgagctaagctatttaccgtgc
tctctaaaaaaaattaaaaagtaattagactcttgtcaaagctattgatt
agtaaagattaaactgagcaagacttgaaaggctga
gaattctcagtacatgtcaggcgctccagcactgacagaaattgtaatat
aaatggagctgccatcagtaaatgaccacatctgtggtatagtccaacca
cagacccacagtcatgccagatagcgccatgtctacatcgttggccaacg
atgtagagccgtacttaacaatatagatttaaataccaagtttcgatcaa
atctaccaagttccaatgaagcaaagactctcaactacaaaaggacaagc
tgtttgcatttctaagcacttcctccccttccctcaccataggacccctt
cctaggttattctcccaggggctagagatgatttgtattcttccaaggcc
ggaataggagaactgttgggagccgcccccacattcaccgtcacaagatg
gcgctgacatcctgtgttctaagtggtaaacaaataatctgcgcatgtgc
caagggtattttacgactacttgtactctgcctttcccgtgaacgttagc
tcggccatgggctgcagccaatcagggagtgatgcgtcctaggcgaaata
taactctcctaaaaggggacggggtttccgccattctctctctggctctg
gcgcctgctcgcttgcgcaaaaagatgtaaacaatagagagcgctctgcg
ctttggcgcgccggagctctggctcctaaagatgtaattggggtggcttt
cgcttttggggctgggggtttgcgctcctggctcctgaagatgtaagcaa
taaagttttgccgcagaagattttggtttgttgtgtttttttcctggccg
ggcgtgagaacgcgaataagaattggtgttgaattccgggacgagaaaat
tcgggacgagaaaatctcgggacgagaaattctcgggacgagaaaatctg
ggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_12608556_12609646
seq2: B6Ng01-060H23.b_45_1130 (reverse)

seq1  TCAG-CTTTCCAGTCTTGCTACATGTTATAATC-TTACTAAACTATATGC  48
      |||| ||||| ||||||||| || ||| ||||| ||||||| | ||| ||
seq2  TCAGCCTTTCAAGTCTTGCT-CA-GTT-TAATCTTTACTAATCAATA-GC  46

seq1  TTTTACAAGAGTCTAATTTACTTTTTAAATTTTTTTTAGGGGGC-CGGTA  97
      ||| |||||||||||| ||||||||| |||||||||||| | || |||| 
seq2  TTTGACAAGAGTCTAA-TTACTTTTT-AATTTTTTTTAGAGAGCACGGT-  93

seq1  AAATAGCTTAGCTCAGCAGTTCTC-AATCTGTGGTCATGTCTTTTTTTGG  146
      ||||||||||||||||||| |||| |||||||||||||||| ||||||||
seq2  AAATAGCTTAGCTCAGCAG-TCTCAAATCTGTGGTCATGTC-TTTTTTGG  141

seq1  CAAACACTATCTCCAAAAATATTTACATTATGACTCCTAACAGCAGCAAA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACTATCTCCAAAAATATTTACATTATGACTCCTAACAGCAGCAAA  191

seq1  ATTACAGTTATACAGTAGCAATGAAAATAATGTTATGGTGGGGGGGGGCA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGTTATACAGTAGCAATGAAAATAATGTTATGGTGGGGGGGGGCA  241

seq1  CCACAATGTAAGGAACTGTATTAAAGGGTCATAGCATTAGGAAGGTTGAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATGTAAGGAACTGTATTAAAGGGTCATAGCATTAGGAAGGTTGAG  291

seq1  AACCACTGCCTTAGCTGCAAAAGGCACCTGATGGCCTGAGTTCACTGCCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTGCCTTAGCTGCAAAAGGCACCTGATGGCCTGAGTTCACTGCCT  341

seq1  GCAACTTGACATGGGAGAAGGGGAGGGCCGAGTCCTACAAACTGTCCTCT  396
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCAACTTGACATGAGAGAAGGGGAGGGCCGAGTCCTACAAACTGTCCTCT  391

seq1  GACCTATGCATATGTGTTGTAGCACATACTCCCCCCCCCGACACTGAGCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTATGCATATGTGTTGTAGCACATACTCCCCCCCCCGACACTGAGCA  441

seq1  AATATAAAAATATTTTTTAAAGAATTTTATGATTTAAAGTGTGTGTGTGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAAATATTTTTTAAAGAATTTTATGATTTAAAGTGTGTGTGTGT  491

seq1  GCTTATGTGTGTGTGTACACTCACGTGCATATCACAGAACCCTCACAGAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATGTGTGTGTGTACACTCACGTGCATATCACAGAACCCTCACAGAG  541

seq1  ATCATAGGACAACCCTCAACCCTATTTGCTCCTTCCACATGTTAATACTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGGACAACCCTCAACCCTATTTGCTCCTTCCACATGTTAATACTA  591

seq1  GGATCAAATGTGTATGTATGTGTGTATGTATGTATGTATGTATGTATGTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAAATGTGTATGTATGTGTGTATGTATGTATGTATGTATGTATGTA  641

seq1  TGTATGTATGTAGAGTCCACTTGCCTTTAATGGCAAATAAGCAGGCTTAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTATGTAGAGTCCACTTGCCTTTAATGGCAAATAAGCAGGCTTAT  691

seq1  CGTAAGGAAATTTTAATTGATATTTGTAATATACTAAGCACACCCCTGGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAAGGAAATTTTAATTGATATTTGTAATATACTAAGCACACCCCTGGG  741

seq1  AAATTTCTATCTTCCTAAATCCCAGATAGTCTTTAAAACCAGCTTCTTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTATCTTCCTAAATCCCAGATAGTCTTTAAAACCAGCTTCTTTT  791

seq1  TCTGTCTCCTCTTGGTGCATATTCATCAGCCACCTAGCCTGTAGCCATCG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCCTCTTGGTGCATATTCATCAGCCACCTAGCCTGTAGCCATCG  841

seq1  TCCATGTGCTATGTATGCTTTTATGCTTCCTTGCAGGGCAGAAAGTGAAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTGCTATGTATGCTTTTATGCTTCCTTGCAGGGCAGAAAGTGAAC  891

seq1  TTCTGGAAGGGATGTGACTGACATACAATGCATATTCCTCATCCATAGGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAAGGGATGTGACTGACATACAATGCATATTCCTCATCCATAGGC  941

seq1  TACAATCCAGGTTTATTTATGTCCAAGGGGATGTGCTATGCAAACATTCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATCCAGGTTTATTTATGTCCAAGGGGATGTGCTATGCAAACATTCT  991

seq1  CCCCCATTCTCACTTGCTTTTTACCTTTTGAATTCAGTTCTGTTTATAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATTCTCACTTGCTTTTTACCTTTTGAATTCAGTTCTGTTTATAAA  1041

seq1  ACAACATGTGTGTGTGTTCATTTTTAACTAGTGTGAATGGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATGTGTGTGTGTTCATTTTTAACTAGTGTGAATGGAATTC  1086

seq1: chr15_12456166_12457025
seq2: B6Ng01-060H23.g_68_928

seq1  GAATTCTCAGTACATGTCAGGCGCTCCAGCACTGACAGAAATTGTAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTACATGTCAGGCGCTCCAGCACTGACAGAAATTGTAATAT  50

seq1  AAATGGAGCTGCCATCAGTAAATGACCACATCTGTGGTATAGTCCAACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGCTGCCATCAGTAAATGACCACATCTGTGGTATAGTCCAACCA  100

seq1  CAGACCCACAGTCATGCCAGATAGCGCCATGTCTACATCGTTGGCCAACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCACAGTCATGCCAGATAGCGCCATGTCTACATCGTTGGCCAACG  150

seq1  ATGTAGAGCCGTACTTAACAATATAGATTTAAATACCAAGTTTCGATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAGCCGTACTTAACAATATAGATTTAAATACCAAGTTTCGATCAA  200

seq1  ATCTACCAAGTTCCAATGAAGCAAAGACTCTCAACTACAAAAGGACAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACCAAGTTCCAATGAAGCAAAGACTCTCAACTACAAAAGGACAAGC  250

seq1  TGTTTGCATTTCTAAGCACTTCCTCCCCTTCCCTCACCATAGGACCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCATTTCTAAGCACTTCCTCCCCTTCCCTCACCATAGGACCCCTT  300

seq1  CCTAGGTTATTCTCCCAGGGGCTAGAGATGATTTGTATTCTTCCAAGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGTTATTCTCCCAGGGGCTAGAGATGATTTGTATTCTTCCAAGGCC  350

seq1  GGAATAGGAGAACTGTTGGGAGCCGCCCCCACATTCACCGTCACAAGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAGGAGAACTGTTGGGAGCCGCCCCCACATTCACCGTCACAAGATG  400

seq1  GCGCTGACATCCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTGACATCCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGC  450

seq1  CAAGGGTATTTTACGACTACTTGTACTCTGCCTTTCCCGTGAACGTTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTATTTTACGACTACTTGTACTCTGCCTTTCCCGTGAACGTTAGC  500

seq1  TCGGCCATGGGCTGCAGCCAATCAGGGAGTGATGCGTCCTAGGCGAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCCATGGGCTGCAGCCAATCAGGGAGTGATGCGTCCTAGGCGAAATA  550

seq1  TAACTCTCCTAAAAGGGGACGGGGTTTCCGCCATTCTCTCTCTGGCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTCCTAAAAGGGGACGGGGTTTCCGCCATTCTCTCTCTGGCTCTG  600

seq1  GCGCCTGCTCGCTTGCGCAAAAAGATGTAAACAATAGAGAGCGCTCTGCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCTGCTCGCTTGCGCAAAAAGATGTAAACAATAGAGAGCGCTCTGCG  650

seq1  CTTTGGCGCGCCGGAGCTCTGGCTCCTAAAGATGTAATTGGGGTGGCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCGCGCCGGAGCTCTGGCTCCTAAAGATGTAATTGGGGTGGCTTT  700

seq1  CGCTTTTGGGGCTGGGGGTTTGCGCTCCTGGCTCCTGAAGATGTAAGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTTGGGGCTGGGGGTTTGCGCTCCTGGCTCCTGAAGATGTAAGCAA  750

seq1  TAAAGTTTTGCCGCAGAAGATTTTGGTTTGTTGTG-TTCTTTCCTGGCCG  799
      ||||||||||||||||||||||||||||||||||| || |||||||||||
seq2  TAAAGTTTTGCCGCAGAAGATTTTGGTTTGTTGTGTTTTTTTCCTGGCCG  800

seq1  GGCGTGAGAACGCGAATAAGAATTGGTGCCGAATTCCGGGACGAGAAAAT  849
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  GGCGTGAGAACGCGAATAAGAATTGGTGTTGAATTCCGGGACGAGAAAAT  850

seq1  CCGGGACGAGA  860
       ||||||||||
seq2  TCGGGACGAGA  861