BAC Information

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BAC

Clone NameB6Ng01-061G13
Chromosome15 (Build37)
Map Location 23,208,714 - 23,338,339
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545091, Cdh18
Downstream geneLOC624863, LOC666989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061G13.bB6Ng01-061G13.g
ACCDH882092DH882093
length338985
definitionDH882092|Mus musculus domesticus DNA, BAC clone: B6Ng01-061G13, 5' end.DH882093|Mus musculus domesticus DNA, BAC clone: B6Ng01-061G13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,208,714 - 23,209,051)(23,337,352 - 23,338,339)
sequence
ctgacatcactgaatcaccctaacccactgctttgggctgcactcttgtg
accactcatgattccaagctattctttgacttcccctttctttttaacgg
caattatctttagcaaacctgcctgagacatccttactgatataattaat
tcatcataggttgacatttcattcacctatgcagcagtttttataaaggc
attttgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgta
tgtgtgtgtgtgaggttgtgtatgcctattcacatgtgtgtgggtaaatg
tgtaagtgtgggtggctgttatggtgatctaaactcca
gaattcactaagaaattatgagactacaacctgggtgtgtatatcaggat
gtctcatgagaaagttagacaatgaagctaattgtctgatctaatcagtg
gaataatgctttgatggactcatatgattccattaatgggaagtggagaa
aagtggaaggtgggatgagttagcggaagtaggtcacaggcaggaatttg
aggcttatcagccctggtttttttctgatgcaattacattgtttgatgct
cacaaggaggttcctctgaaacaagcttccactacatgggtctccacttc
ttcatagtgggttgagaacactgggcaaaatcacacatgagggaatcctt
ttaaaaatgtgaaataaaacacaattctttcatattccttttctgtgtgg
tagatactagattaccaatgaaaataaaactactgaaagtggcttgaaat
atttaaccattagtaacgttaggaattcatgtgttctagacttagaacta
ctgaaagtatactgaacttgctgctaattgctaattgcccagaagtccat
aaaaactttctaattgtgcgagttgccactgtaatcgcattacaatgttg
gctaatttatcactagcaagtaaacacttctatttgcaccttacctagca
agaaatcttctggaagactttcttttctcacacagaattatgagttatga
ttatgtacttttaagccttcctattatattttaaacactgtgaaaaataa
aagaacttcaatttatcaaaataagatgtacatattatattcaaattaga
ttttacttaaccaacagacagacaagctatgactataataaacagtcgat
atcaataatgacagcctttcatcaaatacttttttaacaaatgttacttt
atacaaatcactgagttcttcatttgtcatcaattttcctgggatattat
aggcatagggtaaaagaactatgtttcatgttcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23208714_23209051
seq2: B6Ng01-061G13.b_57_394

seq1  CTGACATCACTGAATCACCCTAACCCACTGCTTTGGGCTGCACTCTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATCACTGAATCACCCTAACCCACTGCTTTGGGCTGCACTCTTGTG  50

seq1  ACCACTCATGATTCCAAGCTATTCTTTGACTTCCCCTTTCTTTTTAACGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCATGATTCCAAGCTATTCTTTGACTTCCCCTTTCTTTTTAACGG  100

seq1  CAATTATCTTTAGCAAACCTGCCTGAGACATCCTTACTGATATAATTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATCTTTAGCAAACCTGCCTGAGACATCCTTACTGATATAATTAAT  150

seq1  TCATCATAGGTTGACATTTCATTCACCTATGCAGCAGTTTTTATAAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATAGGTTGACATTTCATTCACCTATGCAGCAGTTTTTATAAAGGC  200

seq1  ATTTTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  250

seq1  -GTGCATGCATTTATGTGTTATATGCCTATTCACATGTGTGTGGGTACAT  299
       |||  ||   | | ||  | |||||||||||||||||||||||||| ||
seq2  TGTGTGTG-TGTGAGGTTGTGTATGCCTATTCACATGTGTGTGGGTAAAT  299

seq1  GTGTAAGTGTGGGTGGCTGTTATGGTGATCTAAACTCCA  338
      |||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGTGTGGGTGGCTGTTATGGTGATCTAAACTCCA  338

seq1: chr15_23337352_23338339
seq2: B6Ng01-061G13.g_70_1054 (reverse)

seq1  TTGAACATGAAACATAGTTACTTTTACCCTATGCCTATAATATCCCAGGA  50
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTGAACATGAAACATAGTT-CTTTTACCCTATGCCTATAATATCCCAGGA  49

seq1  AAATTGAGTGACAAATGAAGAACTCAGTGATTTGTATAAAGTAACATTTG  100
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGA-TGACAAATGAAGAACTCAGTGATTTGTATAAAGTAACATTTG  98

seq1  TTGAAAAAAGTATTTGATGAAAGGCTGTCATTATTGATATCGACTGTTTA  150
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TT-AAAAAAGTATTTGATGAAAGGCTGTCATTATTGATATCGACTGTTTA  147

seq1  TTATAGTCATAGCTTGTCTGTCTGTTGGTTAAGTAAAATCTAATTTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTCATAGCTTGTCTGTCTGTTGGTTAAGTAAAATCTAATTTGAAT  197

seq1  ATAATATGTACATCTTATTTTGATAAATTGAAGTTCTTTTATTTTTCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATGTACATCTTATTTTGATAAATTGAAGTTCTTTTATTTTTCACA  247

seq1  GTGTTTAAAATATAATAGGAAGGCTTAAAAGTACATAATCATAACTCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTAAAATATAATAGGAAGGCTTAAAAGTACATAATCATAACTCATA  297

seq1  ATTCTGTGTGAGAAAAGAAAGTCTTCCAGAAGATTTCTTGCTAGGTAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGTGAGAAAAGAAAGTCTTCCAGAAGATTTCTTGCTAGGTAAGG  347

seq1  TGCAAATAGAAGTGTTTACTTGCTAGTGATAAATTAGCCAACATTGTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATAGAAGTGTTTACTTGCTAGTGATAAATTAGCCAACATTGTAAT  397

seq1  GCGATTACAGTGGCAACTCGCACAATTAGAAAGTTTTTATGGACTTCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATTACAGTGGCAACTCGCACAATTAGAAAGTTTTTATGGACTTCTGG  447

seq1  GCAATTAGCAATTAGCAGCAAGTTCAGTATACTTTCAGTAGTTCTAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTAGCAATTAGCAGCAAGTTCAGTATACTTTCAGTAGTTCTAAGTC  497

seq1  TAGAACACATGAATTCCTAACGTTACTAATGGTTAAATATTTCAAGCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACACATGAATTCCTAACGTTACTAATGGTTAAATATTTCAAGCCAC  547

seq1  TTTCAGTAGTTTTATTTTCATTGGTAATCTAGTATCTACCACACAGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTAGTTTTATTTTCATTGGTAATCTAGTATCTACCACACAGAAAA  597

seq1  GGAATATGAAAGAATTGTGTTTTATTTCACATTTTTAAAAGGATTCCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATGAAAGAATTGTGTTTTATTTCACATTTTTAAAAGGATTCCCTC  647

seq1  ATGTGTGATTTTGCCCAGTGTTCTCAACCCACTATGAAGAAGTGGAGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGATTTTGCCCAGTGTTCTCAACCCACTATGAAGAAGTGGAGACC  697

seq1  CATGTAGTGGAAGCTTGTTTCAGAGGAACCTCCTTGTGAGCATCAAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGTGGAAGCTTGTTTCAGAGGAACCTCCTTGTGAGCATCAAACAA  747

seq1  TGTAATTGCATCAGAAAAAAACCAGGGCTGATAAGCCTCAAATTCCTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTGCATCAGAAAAAAACCAGGGCTGATAAGCCTCAAATTCCTGCC  797

seq1  TGTGACCTACTTCCGCTAACTCATCCCACCTTCCACTTTTCTCCACTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCTACTTCCGCTAACTCATCCCACCTTCCACTTTTCTCCACTTCC  847

seq1  CATTAATGGAATCATATGAGTCCATCAAAGCATTATTCCACTGATTAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATGGAATCATATGAGTCCATCAAAGCATTATTCCACTGATTAGAT  897

seq1  CAGACAATTAGCTTCATTGTCTAACTTTCTCATGAGACATCCTGATATAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAATTAGCTTCATTGTCTAACTTTCTCATGAGACATCCTGATATAC  947

seq1  ACACCCAGGTTGTAGTCTCATAATTTCTTAGTGAATTC  988
      ||||||||||||||||||||||||||||||||||||||
seq2  ACACCCAGGTTGTAGTCTCATAATTTCTTAGTGAATTC  985