BAC Information

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BAC

Clone NameB6Ng01-062I23
Chromosome15 (Build37)
Map Location 100,170,412 - 100,268,000
singlet/doubletdoublet
Overlap geneENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982
Upstream geneFmnl3, Tegt, C230021P08Rik, 4930556P03Rik, Faim2, LOC545137, Aqp2, Aqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481, LOC100042918, 1700030F18Rik, Gm920, D330037H05Rik, 4930478M13Rik, Dip2b, Atf1, 4930478A21Rik, EG432981, Mettl7a
Downstream geneLetmd1, BC035295, Tcfcp2, Pou6f1, Dazap2, BC004728, Bin2, Ela1, Galnt6, Slc4a8, Scn8a, EG668225, Ankrd33, Acvrl1, Acvr1b, Grasp, Nr4a1, 9430023L20Rik, 6030408B16Rik, Krt80, Krt7, Krt85, Krt83
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062I23.bB6Ng01-062I23.g
ACCDH882917DH882918
length1,1201,135
definitionDH882917|Mus musculus domesticus DNA, BAC clone: B6Ng01-062I23, 5' end.DH882918|Mus musculus domesticus DNA, BAC clone: B6Ng01-062I23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,266,856 - 100,268,000)(100,170,412 - 100,171,558)
sequence
gaattcccttgagaaaatgccttcataagactgtaggcaggcctgtaggg
tattttctttctttcttccttgtttttctttgtcttgttttgagacaggt
tttctctgtgtagccctggctgtcctggaactcactctgttgaccaggct
ggcctcgaactcagggatctgcctgcctctgcctcccgagtgctgggatt
aaaggtgtgcgccaccactgcccaatgatagttctgagttcaaaagaaat
caggctgagcaagccatgaagagcaagctaccaagcagcagccctccaca
gcctccgcatcagttcctatctccaggttcctgcctggattgagttcgtt
gacttctctcaatggattctctgattctgaatatgtaagccaaacaaacc
ctttcctccccaggccaggttgcttttggtcatggtgtttcatcacagca
atagtgaccttcactaagacagatggctcagcaggtaagcgtgtttgcca
caaagctgctgctcagagctgtcttctgaatatgccacgtgccacggtgt
acgcacacaccactcaaataaacaaaaagtgtactgattaaaaaataatg
actcaaacctttcagaagtcagtgtatacgaaggatgagtgtgtcacggg
ggaagagccatgctggatacgggtagtcacaggaactgtagggattcagt
cagtgagggcatgtctcttgccctctgacttctcccgcctctttcccccg
tgcagacatgtgcgccaccctaagctttccctctcccaggcaacataatc
tttgctaaggcttgagatcagaggaatttttactttgtgtcgtccttggc
attaaataaggggacctttacccagcatcagcaggaaccactcttgggag
ccacttagtgctgcctgtcacgtccacggcaatcagaacaaagggtcaga
gttcagaaacctctttgaggacgttctcccgagtgagcccgtgttgtccc
atctcagtctcaggtgcagcagttaagaagctgctcttgggacttagtct
gtaggagaaggagccctgctttaatgctctcttacgcaccttgacatacc
gcagattgactggctaaggg
gaattctctgcagggagacacttagcatccaaatgacacacacacagtta
gtagatcttagccattttggaaggatcagagtggggtgtgactgtgtggc
tatgatctttcaatctttgctttctcccccaccctctcttagaagtgaca
tactagggactgaacccagggctgagagcatgctatgcaagactacacta
tcaggggctggtgagatggctcagtgggtaagagtacccgattgctcttc
tgaaggtccgaagttcaaatcccagcaaccacatggtggctcacaaccat
ccctaacgagatctgactccctcttctggagtgtctgaagacagatacat
tgtacttacatataataataataataataataataataataataataata
ataataataataataataaaaaaacatattgaaccaggcctcaatcgtag
attaagaatgttgttcaggggctttgttttgatacagggtctcactatgt
agcctaggctggccccaaactcacagagatccacctgcctctgcctcctg
tgtgctgatcaaagtcctgtgccactccacaccatccaggatgagttcag
aaagagaacaacaaaaagcaaaacaatgaagcaatatgtttaaaaaatgc
taagggtcttaccatgtagcccaggctggcctggaactcttgatcttctt
gctgcagctatatgagtgttgggatcgcaggactgtctcaccatgaacag
taagtgtgcatatgcaaatatgtgtgcacgcacactcacacacagataca
tagaccccctacacacacctagaagtttttcttggggtgctggggtgaac
ctgggcctagtgcatgaaggaagcacttttttttttttaattattaagct
gaggactgaacccagagccttgtgcttgctagccaagtgctctacctctg
agctaagtccccaactccctgcccaacctgaagagcaagcactctgactg
atctatgccctgggttatatttccataactgatgctaatatgagtctact
agtgttctgctcttgaaagcctatgaagatgtctcttcgtcatcactgaa
agaaatgcagatgcaggacattgatctcctaccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_100266856_100268000
seq2: B6Ng01-062I23.b_47_1166 (reverse)

seq1  CCCTTAGCCAGGTTTGGGGATCTTGCTG-TGTATGTCAAGGTGCTGTATG  49
      |||||||||||         ||   |||  |||||||||||||| |||  
seq2  CCCTTAGCCAG---------TCAATCTGCGGTATGTCAAGGTGC-GTA-A  39

seq1  GAGAGCATTTTGAGGCAGGGGCTTCCTGTCTCCTACAGGACCTAAGTCCC  99
      |||||||  || | ||||||   |||| ||||||||||   |||||| ||
seq2  GAGAGCA--TTAAAGCAGGG--CTCCT-TCTCCTACAG--ACTAAGT-CC  81

seq1  CAAGAGCAGCTCTGTAACCTGCCTTGCACCTGAAGACTGAGGATGGGGCC  149
      ||||||||||| | | | ||||  |||||||| ||||||| ||| ||| |
seq2  CAAGAGCAGCT-TCTTAACTGC--TGCACCTG-AGACTGA-GAT-GGGAC  125

seq1  AACACGGGCTCACTCGGGAGAACGTCCCTCAAAGAGGTTTCTGAACTCTG  199
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AACACGGGCTCACTCGGGAGAACGT-CCTCAAAGAGGTTTCTGAACTCTG  174

seq1  ACCCTTTGTTCTGATTGCCGTGGACGTGACAGGCAGCACTAAGTGGCTCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTGTTCTGATTGCCGTGGACGTGACAGGCAGCACTAAGTGGCTCC  224

seq1  CAAGGGTGGTTCCTGCTGATGCTGGGTAAAGGTCCCCTTATTTAATGCCA  299
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTGGTTCCTGCTGATGCTGGGTAAAGGTCCCCTTATTTAATGCCA  274

seq1  AGGACGACACAAAGTAAAAATTCCTCTGATCTCAAGCCTTAGCAAAGATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGACACAAAGTAAAAATTCCTCTGATCTCAAGCCTTAGCAAAGATT  324

seq1  ATGTTGCCTGGGAGAGGGAAAGCTTAGGGTGGCGCACATGTCTGCACGGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGCCTGGGAGAGGGAAAGCTTAGGGTGGCGCACATGTCTGCACGGG  374

seq1  GGAAAGAGGCGGGAGAAGTCAGAGGGCAAGAGACATGCCCTCACTGACTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAGGCGGGAGAAGTCAGAGGGCAAGAGACATGCCCTCACTGACTG  424

seq1  AATCCCTACAGTTCCTGTGACTACCCGTATCCAGCATGGCTCTTCCCCCG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTACAGTTCCTGTGACTACCCGTATCCAGCATGGCTCTTCCCCCG  474

seq1  TGACACACTCATCCTTCGTATACACTGACTTCTGAAAGGTTTGAGTCATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACACTCATCCTTCGTATACACTGACTTCTGAAAGGTTTGAGTCATT  524

seq1  ATTTTTTAATCAGTACACTTTTTGTTTATTTGAGTGGTGTGTGCGTACAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAATCAGTACACTTTTTGTTTATTTGAGTGGTGTGTGCGTACAC  574

seq1  CGTGGCACGTGGCATATTCAGAAGACAGCTCTGAGCAGCAGCTTTGTGGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGCACGTGGCATATTCAGAAGACAGCTCTGAGCAGCAGCTTTGTGGC  624

seq1  AAACACGCTTACCTGCTGAGCCATCTGTCTTAGTGAAGGTCACTATTGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACGCTTACCTGCTGAGCCATCTGTCTTAGTGAAGGTCACTATTGCT  674

seq1  GTGATGAAACACCATGACCAAAAGCAACCTGGCCTGGGGAGGAAAGGGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGAAACACCATGACCAAAAGCAACCTGGCCTGGGGAGGAAAGGGTT  724

seq1  TGTTTGGCTTACATATTCAGAATCAGAGAATCCATTGAGAGAAGTCAACG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGCTTACATATTCAGAATCAGAGAATCCATTGAGAGAAGTCAACG  774

seq1  AACTCAATCCAGGCAGGAACCTGGAGATAGGAACTGATGCGGAGGCTGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAATCCAGGCAGGAACCTGGAGATAGGAACTGATGCGGAGGCTGTG  824

seq1  GAGGGCTGCTGCTTGGTAGCTTGCTCTTCATGGCTTGCTCAGCCTGATTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTGCTGCTTGGTAGCTTGCTCTTCATGGCTTGCTCAGCCTGATTT  874

seq1  CTTTTGAACTCAGAACTATCATTGGGCAGTGGTGGCGCACACCTTTAATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAACTCAGAACTATCATTGGGCAGTGGTGGCGCACACCTTTAATC  924

seq1  CCAGCACTCGGGAGGCAGAGGCAGGCAGATCCCTGAGTTCGAGGCCAGCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACTCGGGAGGCAGAGGCAGGCAGATCCCTGAGTTCGAGGCCAGCC  974

seq1  TGGTCAACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAAACCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAAACCT  1024

seq1  GTCTCAAAACAAGACAAAGAAAAACAAGGAAGAAAGAAAGAAAATACCCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAAAACAAGACAAAGAAAAACAAGGAAGAAAGAAAGAAAATACCCT  1074

seq1  ACAGGCCTGCCTACAGTCTTATGAAGGCATTTTCTCAAGGGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCTGCCTACAGTCTTATGAAGGCATTTTCTCAAGGGAATTC  1120

seq1: chr15_100170412_100171558
seq2: B6Ng01-062I23.g_69_1203

seq1  GAATTCTCTGCAGGGAGACACTTAGCATCCAAATGACACACACACAGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCAGGGAGACACTTAGCATCCAAATGACACACACACAGTTA  50

seq1  GTAGATCTTAGCCATTTTGGAAGGATCAGAGTGGGGTGTGACTGTGTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATCTTAGCCATTTTGGAAGGATCAGAGTGGGGTGTGACTGTGTGGC  100

seq1  TATGATCTTTCAATCTTTGCTTTCTCCCCCACCCTCTCTTAGAAGTGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCTTTCAATCTTTGCTTTCTCCCCCACCCTCTCTTAGAAGTGACA  150

seq1  TACTAGGGACTGAACCCAGGGCTGAGAGCATGCTATGCAAGACTACACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGGGACTGAACCCAGGGCTGAGAGCATGCTATGCAAGACTACACTA  200

seq1  TCAGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGTACCCGATTGCTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGTACCCGATTGCTCTTC  250

seq1  TGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCAT  300

seq1  CCCTAACGAGATCTGACTCCCTCTTCTGGAGTGTCTGAAGACAGATACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAACGAGATCTGACTCCCTCTTCTGGAGTGTCTGAAGACAGATACAT  350

seq1  TGTACTTACAT------ATAATAATAATAATAATAATAATAATAATAATA  394
      |||||||||||      |||||||||||||||||||||||||||||||||
seq2  TGTACTTACATATAATAATAATAATAATAATAATAATAATAATAATAATA  400

seq1  ATAATAATAATAATAATAAAAAAACATATTGAACCAGGCCTCAATCGTAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATAATAATAATAAAAAAACATATTGAACCAGGCCTCAATCGTAG  450

seq1  ATTAAGAATGTTGTTCAGGGGCTTTGTTTTGATACAGGGTCTCACTATGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAATGTTGTTCAGGGGCTTTGTTTTGATACAGGGTCTCACTATGT  500

seq1  AGCCTAGGCTGGCCCCAAACTCACAGAGATCCACCTGCCTCTGCCTCCTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGGCTGGCCCCAAACTCACAGAGATCCACCTGCCTCTGCCTCCTG  550

seq1  TGTGCTGATCAAAGTCCTGTGCCACTCCACACCATCCAGGATGAGTTCAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGATCAAAGTCCTGTGCCACTCCACACCATCCAGGATGAGTTCAG  600

seq1  AAAGAGAACAACAAAAAGCAAAACAATGAAGCAATATGTTTAAAAAATGC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAACAACAAAAAGCAAAACAATGAAGCAATATGTTTAAAAAATGC  650

seq1  TAAGGGTCTTACCATGTAGCCCAGGCTGGCCTGGAACTCTTGATCTTCTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGTCTTACCATGTAGCCCAGGCTGGCCTGGAACTCTTGATCTTCTT  700

seq1  GCTGCAGCTATATGAGTGTTGGGATCGCAGGACTGTCTCACCATGAACAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGCTATATGAGTGTTGGGATCGCAGGACTGTCTCACCATGAACAG  750

seq1  TAAGTGTGCATATGCAAATATGTGTGCACGCACACTCACACACAGATACA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTGCATATGCAAATATGTGTGCACGCACACTCACACACAGATACA  800

seq1  TAGACCCCCTACACACACCTAGAAG-TTTTCTTGGGGTGCTGGGGTTGAA  843
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  TAGACCCCCTACACACACCTAGAAGTTTTTCTTGGGGTGCTGGGG-TGAA  849

seq1  CCTGGGCCTAGTGCATGAAGGAAGCACTTTTTTTTTTTTTAATTATT-AG  892
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  CCTGGGCCTAGTGCATGAAGGAAGCAC-TTTTTTTTTTTTAATTATTAAG  898

seq1  CTGAGGACTGAACCCAGAGCCTTGTGCTTGCTAGCCAAGTGCTCTACCTC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGACTGAACCCAGAGCCTTGTGCTTGCTAGCCAAGTGCTCTACCTC  948

seq1  TGAGCTAAGTCCCCAACCTCCCCTGCCCAACCCTGAGAGGCAAGCACTCT  992
      |||||||||||||||||   |||||||||| |||||   |||||||||| 
seq2  TGAGCTAAGTCCCCAAC--TCCCTGCCCAA-CCTGAAGAGCAAGCACTC-  994

seq1  TGACTGATCTATAGCCCTGGTTTATTTTTTCTTTAACTGATGCTTAATAT  1042
      |||||||||||| ||||||| ||| | ||||  |||||||||| ||||| 
seq2  TGACTGATCTAT-GCCCTGGGTTA-TATTTCCATAACTGATGC-TAATA-  1040

seq1  TGAGTACCTACTATGTGTTCTGCTCTTGAATAAGCTATGAAGAAATTGTC  1092
      |||||  |||||| |||||||||||||||| |  |||||||||   ||||
seq2  TGAGT--CTACTA-GTGTTCTGCTCTTGAA-AGCCTATGAAGA---TGTC  1083

seq1  TCTTCAGTCATCACTGAAGAAAATGCATAGATGCCAGGACATGTGA--TC  1140
      ||||| ||||||||||||  ||||||  ||||| |||||||| |||  ||
seq2  TCTTC-GTCATCACTGAAAGAAATGC--AGATG-CAGGACAT-TGATCTC  1128

seq1  CTACCTA  1147
      |||||||
seq2  CTACCTA  1135