BAC Information

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BAC

Clone NameB6Ng01-062P14
Chromosome15 (Build37)
Map Location 28,107,151 - 28,108,252
singlet/doubletsinglet
Overlap genenone
Upstream geneAnk, BC087945, LOC100040622, BC052328, Trio, LOC667126
Downstream geneDnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062P14.bB6Ng01-062P14.g
ACCDH883209DH883210
length2701,090
definitionDH883209|Mus musculus domesticus DNA, BAC clone: B6Ng01-062P14, 5' end.DH883210|Mus musculus domesticus DNA, BAC clone: B6Ng01-062P14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagacttgaaaccagcctgtgattctagcctttgttacacagcaagtcca
gatctcagacaattaacaaaagaaaggaagaaagaaaggaagggagggag
ggagggactctattcggtccccgcttacattcatggaggctagcaatcat
ctggaattaaatcacatccgggcagtgaaaattgggaaaaggagttcaca
aagaagtggtctcttgtagatgatgacctgcaaacaagtcatcaacatat
tccctcattcgaccctctcg

gaattcttgacgactactgacttctgggaaaggaagagtcagttttcttt
aaagatgtggcctctggtaagttgaccatgttccaatggatggtcctata
cccataagtatgcgggagaaagttctagagaaggagagaaaagaacaaga
aaaattgaaaagtctgatcgtcttatacagaaaaaaataagcttacacca
ctggggagttcgaagctttctccctgctgagcagccttcatagttctgga
ggcttgtgtgcaagttgctgagggagaaacttcatcagtggtctttctca
gttttgaccttgtggggcaaaaggtacttactggtacaacttggcatgac
tgtatggaaataactgactgacgtctgattgaatcggaatctcactccat
gggtggtagttcatacctactactatgacctggtccaaggctctatgcct
aggtactaagtatgaacctactagaattgtttgcctaggttatagacaca
ttgtcaaaactgtcccttaaatatttgtgtttgtgtccataaactagggc
cttgctgtcctctgccttgaccaaagaagtttctcattgcagcaaataaa
ggtttatacaaatatcagctgtagggcacttgggaccatgctgccaaaca
gcctggtgaagtgggatatgcttggacccgggaatctcagagatctgaga
tggtagatgagtagagctgctctctgagcctccaacacctctgagacttg
gttgcaatggcgaggacagaaagtactcaatcacttagcatagcacttgg
agttctccatgctaaggatgtatctagacagccttgagccttcagccaat
gacctccccttcctaagtattctcatgcccttctcctaagaggtatatat
aatccttggtcaccccgaataaactgtacgtattcatatccacccctata
aatgcagtatgaacagcaggggttgcctaaacgaacagcaacgaacctag
actctttcaggaaagtccttcttctttttggacttcactttcggtgctca
gccatgttccaatagactgatccggattgctagggctcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28107151_28108252
seq2: B6Ng01-062P14.g_69_1158

seq1  GAATTCTTGACGACTACTGACTTCTGGGAAAGGAAGAGTCAGTTTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGACGACTACTGACTTCTGGGAAAGGAAGAGTCAGTTTTCTTT  50

seq1  AAAGATGTGGCCTCTGGTAAGTTGACCATGTTCCAATGGATGGTCCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGTGGCCTCTGGTAAGTTGACCATGTTCCAATGGATGGTCCTATA  100

seq1  CCCATAAGTATGCGGGAGAAAGTTCTAGAGAAGGAGAGAAAAGAACAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAAGTATGCGGGAGAAAGTTCTAGAGAAGGAGAGAAAAGAACAAGA  150

seq1  AAAATTGAAAAGTCTGATCGTCTTATACAGAAAAAAATAAGCTTACACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGAAAAGTCTGATCGTCTTATACAGAAAAAAATAAGCTTACACCA  200

seq1  CTGGGGAGTTCGAAGCTTTCTCCCTGCTGAGCAGCCTTCATAGTTCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAGTTCGAAGCTTTCTCCCTGCTGAGCAGCCTTCATAGTTCTGGA  250

seq1  GGCTTGTGTGCAAGTTGCTGAGGGAGAAACTTCATCAGTGGTCTTTCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTGTGCAAGTTGCTGAGGGAGAAACTTCATCAGTGGTCTTTCTCA  300

seq1  GTTTTGACCTTGTGGGGCAAAAGGTACTTACTGGTACAACTTGGCATGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGACCTTGTGGGGCAAAAGGTACTTACTGGTACAACTTGGCATGAC  350

seq1  TGTATGGAAATAACTGACTGACGTCTGATTGAATCGGAATCTCACTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGGAAATAACTGACTGACGTCTGATTGAATCGGAATCTCACTCCAT  400

seq1  GGGTGGTAGTTCATACCTACTACTATGACCTGGTCCAAGGCTCTATGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTAGTTCATACCTACTACTATGACCTGGTCCAAGGCTCTATGCCT  450

seq1  AGGTACTAAGTATGAACCTACTAGAATTGTTTGCCTAGGTTATAGACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTAAGTATGAACCTACTAGAATTGTTTGCCTAGGTTATAGACACA  500

seq1  TTGTCAAAACTGTCCCTTAAATATTTGTGTTTGTGTCCATAAACTAGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAAAACTGTCCCTTAAATATTTGTGTTTGTGTCCATAAACTAGGGC  550

seq1  CTTGCTGTCCTCTGCCTTGACCAAAGAAGTTTCTCATTGCAGCAAATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGTCCTCTGCCTTGACCAAAGAAGTTTCTCATTGCAGCAAATAAA  600

seq1  GGTTTATACAAATATCAGCTGTAGGGCACTTGGGACCATGCTGCCAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATACAAATATCAGCTGTAGGGCACTTGGGACCATGCTGCCAAACA  650

seq1  GCCTGGTGAAGTGGGATATGCTTGGACCCGGGAATCTCAGAGATCTGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTGAAGTGGGATATGCTTGGACCCGGGAATCTCAGAGATCTGAGA  700

seq1  TGGTAGATGAGTAGAGCTGCTCTCTGAGCCTCCAACACCTCTGAGACTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGATGAGTAGAGCTGCTCTCTGAGCCTCCAACACCTCTGAGACTTG  750

seq1  GTTGCAATGGCGAGGACAGAAGGTACTCAATCACTTAGCATAGCACTTGG  800
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTTGCAATGGCGAGGACAGAAAGTACTCAATCACTTAGCATAGCACTTGG  800

seq1  AGTTCTCCATGCTAAGGATGTATCTAGACAGCCTTGAGCCTTCAGCCAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCCATGCTAAGGATGTATCTAGACAGCCTTGAGCCTTCAGCCAAT  850

seq1  GACCTCCCCTTCCTAAGTATTCTCATGCCCTTCTCCTAAGAGGTATATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCCCCTTCCTAAGTATTCTCATGCCCTTCTCCTAAGAGGTATATAT  900

seq1  AATCCTTGGTTCACCCCGAATAAACTGTACGTATTCATATCCACCCCCAA  950
      ||||||||| ||||||||||||||||||||||||||||||||| |||| |
seq2  AATCCTTGG-TCACCCCGAATAAACTGTACGTATTCATATCCA-CCCCTA  948

seq1  TAAATGCAGTATGAACAAGCAGGGGTTGCCTAAACGAACAGCAACGAACC  1000
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAAATGCAGTATGAAC-AGCAGGGGTTGCCTAAACGAACAGCAACGAACC  997

seq1  TAAGACTCTTCCAGGAAAAGTCCTTTTCTCTTTTTGGAACTTCACTTCCG  1050
      | |||||||| |||| ||||||||| | ||||||||| ||||||||| ||
seq2  T-AGACTCTTTCAGG-AAAGTCCTTCT-TCTTTTTGG-ACTTCACTTTCG  1043

seq1  GTGCTCAGCACTTGTTCCCAATTAGACTGGATCCCGATTGTCTAGGGCTC  1100
      ||||||||| | ||||||  | |||||| ||||| ||||| |||||||||
seq2  GTGCTCAGC-CATGTTCC--AATAGACT-GATCCGGATTG-CTAGGGCTC  1088

seq1  AG  1102
      ||
seq2  AG  1090


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