BAC Information

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BAC

Clone NameB6Ng01-064I13
Chromosome15 (Build37)
Map Location 81,656,405 - 81,788,522
singlet/doubletdoublet
Overlap geneTef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1
Upstream geneTnrc6b, Adsl, LOC625672, Rutbc3, Mkl1, LOC675966, Mchr1, Slc25a17, St13, Xpnpep3, Dnajb7, Rbx1, EG383080, Ep300, L3mbtl2, Rangap1, Zc3h7b
Downstream geneEG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik, BC018285, Cyp2d13, LOC380998, LOC627860, LOC676200, 1300013D18Rik, LOC271300, Cyp2d26, Tcf20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064I13.bB6Ng01-064I13.g
ACCDH884295DH884296
length1,152450
definitionDH884295|Mus musculus domesticus DNA, BAC clone: B6Ng01-064I13, 5' end.DH884296|Mus musculus domesticus DNA, BAC clone: B6Ng01-064I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,656,405 - 81,657,571)(81,788,067 - 81,788,522)
sequence
gaattctaaggagtaaccaggctccagaagccaacttctatttggctttc
cgtgggtttgtcttaggatgagaagtgtcatcacttcctaaacatcctgt
tctcagctatggcagcctcagaaaagacacctgaatgagttagaaccctg
caggaatgtacattcaagagatgtcttgataaagaactacgtgcttttgg
aaagagccaccctttggaggacctgttagtcacctttatcttcagcccaa
aggctaagttatgtgggtctgactcctttggttagggacagcactagaca
gtgaccctaacccttggtccatactccctgctgtgatggtgctgtggtct
gctttccactcaggcagctcctacagtcctccagcctggggacagatggg
aagctttccaggggccccccgagaggtgtgctccctgtaagaggggcctg
taagaggagctcttggtttccagggcaaagccctacccacagcttcttta
acatctgttaattaagtgcaataaaattttctagaaaaaggcaaagatga
tttccaggtagagattgctgtcttttggtgttggatgccagaacaccact
tggttttatttttctaagtgcatgtgattggtagagtgtgtgggctctgc
atcctccctgggagctgcattccagcagcccctctccctacctttgccgt
gggaaagaggccaggagaaaagccctttgtcccagctgcagaggtggaag
cagacagcagccctttggccttacatgtgtgtgtgtgcctgtgcgagtgt
gtccctgctggtgggccggagtgatgtgttatggagggaagttgggaatg
tatccttttcaacaaaattaaatattttgagacgagaacttgggcagtgt
ctttctggtatccctccttaatttctgtctatatatgctgcagagactag
cagaaaacctccttccttcggatcccaggaatactctggtacctaccagc
tagaatgccgagttccttaatcctgggctccagaatggtttctagacacg
caaaaaaatctgatcggagattacactcgaaaactccaatctccttggtt
cggggaaaagacggggtgctgtgtttttttttttctgagaacaggttgtt
tt
tctatcttgggcattacttttgtgctcaaacagttgtgcattttgcattt
ctgatgttttaattagggggtgctcagattcaggtaggagggctccctaa
ttctgagcactaagtcaaatagaggtctccgactttttgataaccgggcc
cttctgtccttcctgcctcaccacagaaaattgaccctgaggtatcggcc
ttcctgcagaagctacgaagcagggtacagatcggcgtggtgggtggctc
tgactactctaagatcgccgagcagctgggagagggggatgaaggtaggc
atggcaacgtcttttcctgttggagttggggtggggtggctccaccctga
acagttactgagtccctgacagtagccagggaccttgctagattctggag
aaacagctagaagtggagcagttagcatcctgccattagacgatgcacat

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_81656405_81657571
seq2: B6Ng01-064I13.b_48_1199

seq1  GAATTCTAAGGAGTAACCAGGCTCCAGAAGCCAACTTCTATTTGGCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGGAGTAACCAGGCTCCAGAAGCCAACTTCTATTTGGCTTTC  50

seq1  CGTGGGTTTGTCTTAGGATGAGAAGTGTCATCACTTCCTAAACATCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGTTTGTCTTAGGATGAGAAGTGTCATCACTTCCTAAACATCCTGT  100

seq1  TCTCAGCTATGGCAGCCTCAGAAAAGACACCTGAATGAGTTAGAACCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTATGGCAGCCTCAGAAAAGACACCTGAATGAGTTAGAACCCTG  150

seq1  CAGGAATGTACATTCAAGAGATGTCTTGATAAAGAACTACGTGCTTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATGTACATTCAAGAGATGTCTTGATAAAGAACTACGTGCTTTTGG  200

seq1  AAAGAGCCACCCTTTGGAGGACCTGTTAGTCACCTTTATCTTCAGCCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCCACCCTTTGGAGGACCTGTTAGTCACCTTTATCTTCAGCCCAA  250

seq1  AGGCTAAGTTATGTGGGTCTGACTCCTTTGGTTAGGGACAGCACTAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAAGTTATGTGGGTCTGACTCCTTTGGTTAGGGACAGCACTAGACA  300

seq1  GTGACCCTAACCCTTGGTCCATACTCCCTGCTGTGATGGTGCTGTGGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCTAACCCTTGGTCCATACTCCCTGCTGTGATGGTGCTGTGGTCT  350

seq1  GCTTTCCACTCAGGCAGCTCCTACAGTCCTCCAGCCTGGGGACAGATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCACTCAGGCAGCTCCTACAGTCCTCCAGCCTGGGGACAGATGGG  400

seq1  AAGCTTTCCAGGGGCCCCCCGAGAGGTGTGCTCCCTGTAAGAGGGGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTCCAGGGGCCCCCCGAGAGGTGTGCTCCCTGTAAGAGGGGCCTG  450

seq1  TAAGAGGAGCTCTTGGTTTCCAGGGCAAAGCCCTACCCACAGCTTCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGAGCTCTTGGTTTCCAGGGCAAAGCCCTACCCACAGCTTCTTTA  500

seq1  ACATCTGTTAATTAAGTGCAATAAAATTTTCTAGAAAAAGGCAAAGATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGTTAATTAAGTGCAATAAAATTTTCTAGAAAAAGGCAAAGATGA  550

seq1  TTTCCAGGTAGAGATTGCTGTCTTTTGGTGTTGGATGCCAGAACACCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGGTAGAGATTGCTGTCTTTTGGTGTTGGATGCCAGAACACCACT  600

seq1  TGGTTTTATTTTTCTAAGTGCATGTGATTGGTAGAGTGTGTGGGCTCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTATTTTTCTAAGTGCATGTGATTGGTAGAGTGTGTGGGCTCTGC  650

seq1  ATCCTCCCTGGGAGCTGCATTCCAGCAGCCCCTCTCCCTACCTTTGCCGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCCTGGGAGCTGCATTCCAGCAGCCCCTCTCCCTACCTTTGCCGT  700

seq1  GGGAAAGAGGCCAGGAGAAAAGCCCTTTGTCCCAGCTGCAGAGGTGGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGAGGCCAGGAGAAAAGCCCTTTGTCCCAGCTGCAGAGGTGGAAG  750

seq1  CAGACAGCAGCCCTTTGGCCTTACATGTGTGTGTGTGCCTGTGCGAGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGCAGCCCTTTGGCCTTACATGTGTGTGTGTGCCTGTGCGAGTGT  800

seq1  GTCCCTGCTGGTGGGCCGGAGTGATGTGTTATGGAGGGAAGTTGGGAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGCTGGTGGGCCGGAGTGATGTGTTATGGAGGGAAGTTGGGAATG  850

seq1  TATCCTTTTCAAACAAAATTAAATATTTTGAGACGAGAACTT-GGCAGTG  899
      |||||||||| ||||||||||||||||||||||||||||||| |||||| 
seq2  TATCCTTTTC-AACAAAATTAAATATTTTGAGACGAGAACTTGGGCAGT-  898

seq1  GTCTTTTCTGTTATTCCCTCCTTTATTTTCTGTCTATATATGCCTGCATG  949
      ||| |||||| || ||||||| ||| |||||||||||||||| ||||| |
seq2  GTC-TTTCTGGTA-TCCCTCC-TTAATTTCTGTCTATATATG-CTGCA-G  943

seq1  AGAACCTAGCCAGAGAACCTCCTCTCTTCGGAATCCCAGGCAACACCTCT  999
      |||  |||| |||| ||||||||  |||||| |||||||| || | ||||
seq2  AGA--CTAG-CAGAAAACCTCCTTCCTTCGG-ATCCCAGG-AATA-CTCT  987

seq1  -GTACACACCAGCTAGATGCCCGAGTCTCCTAACTCCTGGCCTACAGAAT  1048
       ||||  ||||||||||   |||||| |||| | |||||| || ||||||
seq2  GGTACCTACCAGCTAGAATGCCGAGT-TCCTTAATCCTGGGCTCCAGAAT  1036

seq1  GAGTTCTAGAACAGCCAAAAAAATCTGATCTGCAAATTAAACACTGAGAA  1098
      |  |||||| |||  ||||||||||||||| | | |||  |||||   ||
seq2  GGTTTCTAG-ACACGCAAAAAAATCTGATC-GGAGATT--ACACTCGAAA  1082

seq1  ACTCACAATCCTCCTGTGTACTGGGAATAACAGGTGTTGCT-TTTTTTTT  1147
      |||| |||| |||||  || | ||||| || | | | |||| | ||||||
seq2  ACTC-CAAT-CTCCTTGGTTCGGGGAA-AAGACGGGGTGCTGTGTTTTTT  1129

seq1  TTTTTCTGAG-ACAGG--GTTTT  1167
      |||||||||| |||||  |||||
seq2  TTTTTCTGAGAACAGGTTGTTTT  1152

seq1: chr15_81788067_81788522
seq2: B6Ng01-064I13.g_70_525 (reverse)

seq1  ATGTGCATCGTCTAATGGCAGGATGCTAACTGCTCCACTTCTAGCTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCATCGTCTAATGGCAGGATGCTAACTGCTCCACTTCTAGCTGTTT  50

seq1  CTCCAGAATCTAGCAAGGTCCCTGGCTACTGTCAGGGACTCAGTAACTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAATCTAGCAAGGTCCCTGGCTACTGTCAGGGACTCAGTAACTGT  100

seq1  TCAGGGTGGAGCCACCCCACCCCAACTCCAACAGGAAAAGACGTTGCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTGGAGCCACCCCACCCCAACTCCAACAGGAAAAGACGTTGCCAT  150

seq1  GCCTACCTTCATCCCCCTCTCCCAGCTGCTCGGCGATCTTAGAGTAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACCTTCATCCCCCTCTCCCAGCTGCTCGGCGATCTTAGAGTAGTCA  200

seq1  GAGCCACCCACCACGCCGATCTGTACCCTGCTTCGTAGCTTCTGCAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACCCACCACGCCGATCTGTACCCTGCTTCGTAGCTTCTGCAGGAA  250

seq1  GGCCGATACCTCAGGGTCAATTTTCTGTGGTGAGGCAGGAAGGACAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGATACCTCAGGGTCAATTTTCTGTGGTGAGGCAGGAAGGACAGAAG  300

seq1  GGCCCGGTTATCAAAAAGTCGGAGACCTCTATTTGACTTAGTGCTCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGGTTATCAAAAAGTCGGAGACCTCTATTTGACTTAGTGCTCAGAA  350

seq1  TTAGGGAGCCCTCCTACCTGAATCTGAGCACCCCCTAATTAAAACATCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAGCCCTCCTACCTGAATCTGAGCACCCCCTAATTAAAACATCAG  400

seq1  AAATGCAAAATGCACAACTGTTTGAGCACAAAAGTAATGCCCAAGATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAAAATGCACAACTGTTTGAGCACAAAAGTAATGCCCAAGATAGA  450

seq1  GAATTC  456
      ||||||
seq2  GAATTC  456