BAC Information

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BAC

Clone NameB6Ng01-068F22
Chromosome15 (Build37)
Map Location 59,942,869 - 60,114,366
singlet/doubletdoublet
Overlap geneLOC100040266
Upstream geneEG268809, LOC665565, Sqle, E430025E21Rik, Nsmce2, Trib1, LOC665602, EG632248, LOC665613, 4933412E24Rik
Downstream geneLOC623048, LOC211832, LOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068F22.bB6Ng01-068F22.g
ACCDH886975DH886976
length1,2691,073
definitionDH886975|Mus musculus domesticus DNA, BAC clone: B6Ng01-068F22, 5' end.DH886976|Mus musculus domesticus DNA, BAC clone: B6Ng01-068F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,113,066 - 60,114,366)(59,942,869 - 59,943,945)
sequence
gaattctctagttcaggttggcctgagaaaacatgtgtgaagaatgatct
cagtggaagattgatatagaaaaactcaggctatcatgggtagcaccatt
ccctaggctataccctggattgtacatcagtgatgaaggataacaagcaa
gcaagcagcatgagcacattcatttctttctgctctggatgatgaatttg
atgtaactggcttcttgagttcctaccttgactttccctcagtgatggac
gtgacctggtgacctaattagccctttgttccctaagtatctttctttca
ggatattctattataacaataaaaattaaacagaacagaaacattaatct
cttctaacctagtaattcagtaaccttttaatttccagaagatatttgga
gattaatattacatgtaatctagtttgggaggtgtggttttaaagacaat
ctacagtacaccaaggtacggtggcatttttaaagttgagtgtttcctct
ttggtcttgataaggagaagataataacaatgaataaacaacagaaaagt
ttaataatactgtttgtcttggacattttatttgtgccaactgtgcatta
ttttaaatgttttttaaagaatattagttaattcattatataaaatttat
gatataggaaccactaatgtctccattctatagagagaaaaaaaaaagaa
ataaagaagctaaataacttgcccaagatcagaaataataagtagtacta
atattttaattttgttagattgacttagtttaaattaaaggtcacttttt
aagacccacataattacctggggagttataattcaagccttagcacaatg
agaggattaactgggaatgactaaatccacagagaaggattatgttctgt
atcttttaaatgagctaactttaagaacacttttgaaagcaaatagcgct
gtggagtgctgtgctgccctttgcttttaatcccatcatccatggatatt
tagtcatgtgatgctacaggattatcctcagtttttctagatgccatttt
gttctatgtatggtcaacattggcatgtgattgcgttatgggctcctgag
ttcatcgcatacagcacctcatgaattgagggctgacaattatatcactc
acttagtgggtaagccttttctttgcttaacatcaccctttacttccagc
ttataccctccctaatggtttcaaatttgtctgactcaagatgtgtgttt
ggccataatttccctatgc
gaattctcactcatctcattctctctgaagctctctctccactgtgtgtg
gccagtctacgacaactgctgaatcaatgctgtgactctactttcaggga
attagctcagctcaaaaccacacatactttagaatggaggacataagaaa
tgatattgcaggctcttacagtctcaactatcagcaaggttggggcttca
ggacgcacacttctctccaggtttctgactccttaaagagcttttgtggg
ccagcttgaccatctaacctaggagctcgtgtctttgatattgctggtgg
gttggacagtaatatgagcagtgtttcttaaaagcatattgcctaatcta
aagctcgactccagtacaaattagctctgataatttagtgagtttcttaa
tatctctctgactgggacttggtcatctttaaaaaggacagcgagttata
tcatgattttgatgatatggaacatacatgatcatagtttatatataagt
aaaacaaagggtttagaacagtttctaacatattgccacttctgcatact
ttcaaaaatttaatttttttaaaacttatttagggtttagaacacattgg
accctttcaagtgccaacacctgaaaccacttcctaggcattcttgtcat
ttttttttaaataactgtggtttctgactcccttctgatctaaacatgtt
tacctcagatcttacttgtcttatgattccccccccccgccccgtttccc
aatgcaaaggccaagttttgaactgtgggaaatagtcttcttatctgaag
tgtgcttcagctctgtctcaaaaatctcgtaaaaagttcaatcagccaaa
ggagacagcactgggaggtaaagggagttgagcagagtggcttttgtgag
tagaagtggctttttttggtgtgtgcttagtgtgctgtaattctagtatg
agttttgaacacaataatccttccctttttctctctttgtgaccctttgg
ccagaactggcatcgcacaagaatgccatgaatgacctcacctaggatgg
gctctctagggattcttaacagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_60113066_60114366
seq2: B6Ng01-068F22.b_49_1317 (reverse)

seq1  GCATAGGGAAATACTAGCCAAACACATACACATCTTTGAGGTCAAGCAAG  50
      ||||||||||||  | |||||||    ||||||| |||| ||||  ||| 
seq2  GCATAGGGAAATTATGGCCAAAC----ACACATC-TTGA-GTCAGACAA-  43

seq1  TATTTGGAAAACATTATGAAGGAAGGGTAGTAGAGTTGGAAGTAGAGGGT  100
       |||| |||| ||||    ||| |||||| || || |||||||| |||||
seq2  -ATTT-GAAACCATT----AGGGAGGGTA-TA-AGCTGGAAGTAAAGGGT  85

seq1  GAGTGTAAGCAACAGAAAAGTCTAACACAACATAATGTGATGTGATATAT  150
      ||   ||||||| ||||||| || || ||   ||| |||| |||||||| 
seq2  GATGTTAAGCAA-AGAAAAGGCTTACCCA--CTAA-GTGA-GTGATATA-  129

seq1  ATTGTCAGCCTTCATAATCATGAGGGTGCTGGTATGCGATGGACTCAGGA  200
      |||||||||| ||| | |||||| |||||| |||||||||| ||||||||
seq2  ATTGTCAGCCCTCA-ATTCATGA-GGTGCT-GTATGCGATGAACTCAGGA  176

seq1  GCACCATTAACGCAATCACATGCAAATGTTGACCATTACCATAGAACAAA  250
      || ||| |||||||||||||||| ||||||||||||   |||||||| ||
seq2  GC-CCA-TAACGCAATCACATGCCAATGTTGACCAT--ACATAGAAC-AA  221

seq1  AATGGCATCTAGAAAAAACTGAGGATAATTCCTGTAGCATCACATGACTA  300
      |||||||||||| ||||||||||||||| |||||||||||||||||||||
seq2  AATGGCATCTAG-AAAAACTGAGGATAA-TCCTGTAGCATCACATGACTA  269

seq1  AATAATCCATGGATGATGGGATTAAAAGCAAAGGGCAGCACAGCACTCCA  350
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAT-ATCCATGGATGATGGGATTAAAAGCAAAGGGCAGCACAGCACTCCA  318

seq1  CAGCGCTATTTGCTTTCAAAAGTGTTCTTAAAGTTAGCTCATTTAAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCTATTTGCTTTCAAAAGTGTTCTTAAAGTTAGCTCATTTAAAAGA  368

seq1  TACAGAACATAATCCTTCTCTGTGGATTTAGTCATTCCCAGTTAATCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAACATAATCCTTCTCTGTGGATTTAGTCATTCCCAGTTAATCCTC  418

seq1  TCATTGTGCTAAGGCTTGAATTATAACTCCCCAGGTAATTATGTGGGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTGCTAAGGCTTGAATTATAACTCCCCAGGTAATTATGTGGGTCT  468

seq1  TAAAAAGTGACCTTTAATTTAAACTAAGTCAATCTAACAAAATTAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTGACCTTTAATTTAAACTAAGTCAATCTAACAAAATTAAAATA  518

seq1  TTAGTACTACTTATTATTTCTGATCTTGGGCAAGTTATTTAGCTTCTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACTACTTATTATTTCTGATCTTGGGCAAGTTATTTAGCTTCTTTA  568

seq1  TTTCTTTTTTTTTTCTCTCTATAGAATGGAGACATTAGTGGTTCCTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTTTTTCTCTCTATAGAATGGAGACATTAGTGGTTCCTATAT  618

seq1  CATAAATTTTATATAATGAATTAACTAATATTCTTTAAAAAACATTTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATTTTATATAATGAATTAACTAATATTCTTTAAAAAACATTTAAA  668

seq1  ATAATGCACAGTTGGCACAAATAAAATGTCCAAGACAAACAGTATTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCACAGTTGGCACAAATAAAATGTCCAAGACAAACAGTATTATTA  718

seq1  AACTTTTCTGTTGTTTATTCATTGTTATTATCTTCTCCTTATCAAGACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCTGTTGTTTATTCATTGTTATTATCTTCTCCTTATCAAGACCA  768

seq1  AAGAGGAAACACTCAACTTTAAAAATGCCACCGTACCTTGGTGTACTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAACACTCAACTTTAAAAATGCCACCGTACCTTGGTGTACTGTA  818

seq1  GATTGTCTTTAAAACCACACCTCCCAAACTAGATTACATGTAATATTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTCTTTAAAACCACACCTCCCAAACTAGATTACATGTAATATTAAT  868

seq1  CTCCAAATATCTTCTGGAAATTAAAAGGTTACTGAATTACTAGGTTAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAATATCTTCTGGAAATTAAAAGGTTACTGAATTACTAGGTTAGAA  918

seq1  GAGATTAATGTTTCTGTTCTGTTTAATTTTTATTGTTATAATAGAATATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTAATGTTTCTGTTCTGTTTAATTTTTATTGTTATAATAGAATATC  968

seq1  CTGAAAGAAAGATACTTAGGGAACAAAGGGCTAATTAGGTCACCAGGTCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGAAAGATACTTAGGGAACAAAGGGCTAATTAGGTCACCAGGTCA  1018

seq1  CGTCCATCACTGAGGGAAAGTCAAGGTAGGAACTCAAGAAGCCAGTTACA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCATCACTGAGGGAAAGTCAAGGTAGGAACTCAAGAAGCCAGTTACA  1068

seq1  TCAAATTCATCATCCAGAGCAGAAAGAAATGAATGTGCTCATGCTGCTTG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTCATCATCCAGAGCAGAAAGAAATGAATGTGCTCATGCTGCTTG  1118

seq1  CTTGCTTGTTATCCTTCATCACTGATGTACAATCCAGGGTATAGCCTAGG  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTGTTATCCTTCATCACTGATGTACAATCCAGGGTATAGCCTAGG  1168

seq1  GAATGGTGCTACCCATGATAGCCTGAGTTTTTCTATATCAATCTTCCACT  1250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTGCTACCCATGATAGCCTGAGTTTTTCTATATCAATCTTCCACT  1218

seq1  GAGATCATTCTTCACACATGTTTTCTCAGGCCAACCTGAACTAGAGAATT  1300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCATTCTTCACACATGTTTTCTCAGGCCAACCTGAACTAGAGAATT  1268

seq1  C  1301
      |
seq2  C  1269

seq1: chr15_59942869_59943945
seq2: B6Ng01-068F22.g_69_1141

seq1  GAATTCTCACTCATCTCATTCTCTCTGAAGCTCTCTCTCCACTGTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTCATCTCATTCTCTCTGAAGCTCTCTCTCCACTGTGTGTG  50

seq1  GCCAGTCTACGACAACTGCTGAATCAATGCTGTGACTCTACTTTCAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCTACGACAACTGCTGAATCAATGCTGTGACTCTACTTTCAGGGA  100

seq1  ATTAGCTCAGCTCAAAACCACACATACTTTAGAATGGAGGACATAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTCAGCTCAAAACCACACATACTTTAGAATGGAGGACATAAGAAA  150

seq1  TGATATTGCAGGCTCTTACAGTCTCAACTATCAGCAAGGTTGGGGCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTGCAGGCTCTTACAGTCTCAACTATCAGCAAGGTTGGGGCTTCA  200

seq1  GGACGCACACTTCTCTCCAGGTTTCTGACTCCTTAAAGAGCTTTTGTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGCACACTTCTCTCCAGGTTTCTGACTCCTTAAAGAGCTTTTGTGGG  250

seq1  CCAGCTTGACCATCTAACCTAGGAGCTCGTGTCTTTGATATTGCTGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTGACCATCTAACCTAGGAGCTCGTGTCTTTGATATTGCTGGTGG  300

seq1  GTTGGACAGTAATATGAGCAGTGTTTCTTAAAAGCATATTGCCTAATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGACAGTAATATGAGCAGTGTTTCTTAAAAGCATATTGCCTAATCTA  350

seq1  AAGCTCGACTCCAGTACAAATTAGCTCTGATAATTTAGTGAGTTTCTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCGACTCCAGTACAAATTAGCTCTGATAATTTAGTGAGTTTCTTAA  400

seq1  TATCTCTCTGACTGGGACTTGGTCATCTTTAAAAAGGACAGCGAGTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCTGACTGGGACTTGGTCATCTTTAAAAAGGACAGCGAGTTATA  450

seq1  TCATGATTTTGATGATATGGAACATACATGATCATAGTTTATATATAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATTTTGATGATATGGAACATACATGATCATAGTTTATATATAAGT  500

seq1  AAAACAAAGGGTTTAGAACAGTTTCTAACATATTGCCACTTCTGCATACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAGGGTTTAGAACAGTTTCTAACATATTGCCACTTCTGCATACT  550

seq1  TTCAAAAATTTAATTTTTTTAAAACTTATTTAGGGTTTAGAACACATTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAATTTAATTTTTTTAAAACTTATTTAGGGTTTAGAACACATTGG  600

seq1  ACCCTTTCAAGTGCCAACACCTGAAACCACTTCCTAGGCATTCTTGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTCAAGTGCCAACACCTGAAACCACTTCCTAGGCATTCTTGTCAT  650

seq1  TTTTTTTTAAATAACTGTGGTTTCTGACTCCCTTCTGATCTAAACATGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAAATAACTGTGGTTTCTGACTCCCTTCTGATCTAAACATGTT  700

seq1  TACCTCAGATCTTACTTGTCTTATGATTCCCCCCCCCCGCCCCGTTTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCAGATCTTACTTGTCTTATGATTCCCCCCCCCCGCCCCGTTTCCC  750

seq1  AATGCAAAGGCCAAGTTTTGAACTGTGGGAAATAGTCTTCTTATCTGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAAGGCCAAGTTTTGAACTGTGGGAAATAGTCTTCTTATCTGAAG  800

seq1  TGTGCTTCAGCTCTGTCTCAAAAATCTCGTAAAAAGTTCAATCAGCCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTCAGCTCTGTCTCAAAAATCTCGTAAAAAGTTCAATCAGCCAAA  850

seq1  GGAGACAGCACTGGGAGGT-AAGGGAGTTGAGCAGAGTGGCTTTTGTGAG  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGAGACAGCACTGGGAGGTAAAGGGAGTTGAGCAGAGTGGCTTTTGTGAG  900

seq1  TAGAAGTGGCTTTTTTTGGTGTGTGCTTAGTGTGGCTGTAATTCTAGTAT  949
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAGAAGTGGCTTTTTTTGGTGTGTGCTTAGTGT-GCTGTAATTCTAGTAT  949

seq1  GAGTTTTTGAACACAATAATCCTTCCCCTTTTCATCTCTTTGTGAACCCT  999
      ||| ||||||||||||||||||||||| ||||| |||||||||| |||||
seq2  GAG-TTTTGAACACAATAATCCTTCCCTTTTTC-TCTCTTTGTG-ACCCT  996

seq1  TTGGCCAGAAAACTGGCATCGCACAAAGATGCCAATGAAATGA-CTCA-C  1047
      ||||||||  ||||||||||||||||  ||||| ||| ||||| |||| |
seq2  TTGGCCAG--AACTGGCATCGCACAAGAATGCC-ATG-AATGACCTCACC  1042

seq1  TAGGATGGGCT-TCTAGGGGATTC-TAACAGT  1077
      ||||||||||| |||| ||||||| |||||||
seq2  TAGGATGGGCTCTCTA-GGGATTCTTAACAGT  1073