BAC Information

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BAC

Clone NameB6Ng01-071O17
Chromosome15 (Build37)
Map Location 81,989,440 - 82,144,713
singlet/doubletdoublet
Overlap geneSrebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl
Upstream geneMkl1, LOC675966, Mchr1, Slc25a17, St13, Xpnpep3, Dnajb7, Rbx1, EG383080, Ep300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134
Downstream geneNaga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik, BC018285, Cyp2d13, LOC380998, LOC627860, LOC676200, 1300013D18Rik, LOC271300, Cyp2d26, Tcf20, Nfam1, Serhl, 1110014J01Rik, Poldip3, Cyb5r3, A4galt, LOC100042119, Arfgap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071O17.bB6Ng01-071O17.g
ACCDH889481DH889482
length1,1361,111
definitionDH889481|Mus musculus domesticus DNA, BAC clone: B6Ng01-071O17, 5' end.DH889482|Mus musculus domesticus DNA, BAC clone: B6Ng01-071O17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,143,567 - 82,144,713)(81,989,440 - 81,990,568)
sequence
gaattcaggattctggactgccacagacatgggatggcctgcttcagacc
cagcaggtggagcttcctgtgctacagacgtggcccttgatccaggaggt
atggactcacgccctgaaggaggagttccataccccataggcggggcttc
atatctgggaggtggggaaccggatcccataggtgtagttccgtatctgg
gaggttgggctccatactccatagtgggggcttcatatccaggaggtggg
gatccgtatctcacaggtggaggtccatatccaggaggtggaactccata
gcccattggggtagctacatatagaggaggaggggagccatatctcacag
ctccgtatccaggaggcaggacatcgtatccgggagatggggctacataa
cccactggcggggctccgtaccccgcaggtggggctccataccctgcaga
tgggactccgtatcccacgggtgaggccccatatcccgcaggtggggctc
cataggcaactgaaaatggcaaaaagaaggaaaaaaattgttaccctgtg
aacaaaggataactgaagaatacaaaaaaataaggtcaagaaaaacacac
atgagaattgagccatgctaaaaacctgatctttagccattaccagggag
agaaagatggcgtttcttttggtgaggtgatctgaattaactggaaatag
ccttccattggccattacattggtcattacttagagttgtgcagatacat
agtttatttggtaatgtttgttgtggttatgaaaagagaaacgccctcaa
tgaggagataacttgtaaactagaatgggcaaggtcattttagaggatgg
gtggttctggagacatggctcagtagcaatggctgctctcagatgactcc
ggtttgattaccagttcccacatggcacaaccatttataactccagttct
tctccccaaatcttcccagtcttcaatctccctccccgggaagtggaagt
tgctacacccagtgacacttcattggcgaaactaatttgccctttcctga
cgtagcagtacaatagctactttggttcacgtgcctactagatctaggga
tttgtctgtttgaccttgtatcgtatatacagtcag
gaattccagatgtttgaggcactaaagaaggacttggggaagtcttcaca
aggactttggctaagttgtaaatgaagggtgggtgagcagatgcgtgttt
gtaaaattatttatttgtattttatgtacattggtgttttgcttgggtgc
acgtctgtgtgaggcagtcagattttggagttacagttgtgagctgccat
gtgggggctgggaattgggcctgggtcctctagaagagcggtcagcaagt
acacttttctgctgagccatctctccagcccctagcagaaccgttcttga
taaactgttaccttctcaaccccttttaatcaggcccttctatgcttcag
tgtattctctatctgacaagcttgagttaaaagcaagggtttacttgagg
gaggggagtacatgtattgattgacaatctagaaagctgggcttggaaaa
tgggtttgaatccagagaggctcagcggtgccagagcccagccagggtta
ggataaacagcagcctgctcaggaccccgccttcctgacgacctgttggg
tcctttcctgagtaggagcaggccttaatcagagttgacttgtaggcagc
cttgtcaagacatgcctggtgggcattctccagaggaccagtgggatgct
catggtgtgtgtgcgtgtgcgtgatgaaacgaaatgacagctgtccattg
ctgctcctctctggtgatgatgtcattacggccttcacctaaggcagctc
catccatccatccctctcgcgttccaggatctctgcattgtcaatttgca
gggcatctcctggtgctgttttgttgctgttttccctcaactgttccttt
ttccttgaatgcgcttccatccctttagctcttagaaccccttttatcca
gggttcagctttcagtcgcccagagtggtcctttcctccttacagcctta
catgttgagcatctgactcccttatggcgagctggtggactggttgggtc
tctgtactctctgggattctctgcatatgtagacaggcattctaccacga
gttacactagctgcatccaggtgcttccctcaccactacttagacagtct
cagtgcagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_82143567_82144713
seq2: B6Ng01-071O17.b_47_1182 (reverse)

seq1  CTGA-TGTATATAACGATACAAGGTCAAAACAGACAAAAATCCCCTGATC  49
      |||| ||||||| ||||||||||||| ||||||||  |||||||  ||||
seq2  CTGACTGTATAT-ACGATACAAGGTC-AAACAGAC--AAATCCCTAGATC  46

seq1  TAGGAGGGCAAGTGGACACAAAGTAGCTATTTGTAACTGCTACCTTCTGG  99
      ||| | |||| ||| || ||||||||||| |||| |||||||| |    |
seq2  TAGTA-GGCACGTGAAC-CAAAGTAGCTA-TTGT-ACTGCTACGT--CAG  90

seq1  GAAAGGGAAAATTAGTTTCGCCAATGGAGTGTCACTGGGTGTAGCAAC-T  148
      ||||||| |||||||||||||||||| ||||||||||||||||||||| |
seq2  GAAAGGGCAAATTAGTTTCGCCAATGAAGTGTCACTGGGTGTAGCAACTT  140

seq1  CCACTCCCGGGGGAGGGGAGATTGGAAGACTGGGAGGATTTGGGGGAGAA  198
      ||||| || ||||| |||||||| ||||||||||| ||||| ||||||||
seq2  CCACTTCCCGGGGA-GGGAGATT-GAAGACTGGGAAGATTT-GGGGAGAA  187

seq1  GAACTGGAGTTATAAATGGTTGTGCCATGTGGGAACTGGTAATCAAACCG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGAGTTATAAATGGTTGTGCCATGTGGGAACTGGTAATCAAACCG  237

seq1  GAGTCATCTGAGAGCAGCCATTGCTACTGAGCCATGTCTCCAGAACCACC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATCTGAGAGCAGCCATTGCTACTGAGCCATGTCTCCAGAACCACC  287

seq1  CATCCTCTAAAATGACCTTGCCCATTCTAGTTTACAAGTTATCTCCTCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCTAAAATGACCTTGCCCATTCTAGTTTACAAGTTATCTCCTCAT  337

seq1  TGAGGGCGTTTCTCTTTTCATAACCACAACAAACATTACCAAATAAACTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGCGTTTCTCTTTTCATAACCACAACAAACATTACCAAATAAACTA  387

seq1  TGTATCTGCACAACTCTAAGTAATGACCAATGTAATGGCCAATGGAAGGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTGCACAACTCTAAGTAATGACCAATGTAATGGCCAATGGAAGGC  437

seq1  TATTTCCAGTTAATTCAGATCACCTCACCAAAAGAAACGCCATCTTTCTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCAGTTAATTCAGATCACCTCACCAAAAGAAACGCCATCTTTCTC  487

seq1  TCCCTGGTAATGGCTAAAGATCAGGTTTTTAGCATGGCTCAATTCTCATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGTAATGGCTAAAGATCAGGTTTTTAGCATGGCTCAATTCTCATG  537

seq1  TGTGTTTTTCTTGACCTTATTTTTTTGTATTCTTCAGTTATCCTTTGTTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTTCTTGACCTTATTTTTTTGTATTCTTCAGTTATCCTTTGTTC  587

seq1  ACAGGGTAACAATTTTTTTCCTTCTTTTTGCCATTTTCAGTTGCCTATGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTAACAATTTTTTTCCTTCTTTTTGCCATTTTCAGTTGCCTATGG  637

seq1  AGCCCCACCTGCGGGATATGGGGCCTCACCCGTGGGATACGGAGTCCCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCACCTGCGGGATATGGGGCCTCACCCGTGGGATACGGAGTCCCAT  687

seq1  CTGCAGGGTATGGAGCCCCACCTGCGGGGTACGGAGCCCCGCCAGTGGGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGGTATGGAGCCCCACCTGCGGGGTACGGAGCCCCGCCAGTGGGT  737

seq1  TATGTAGCCCCATCTCCCGGATACGATGTCCTGCCTCCTGGATACGGAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGCCCCATCTCCCGGATACGATGTCCTGCCTCCTGGATACGGAGC  787

seq1  TGTGAGATATGGCTCCCCTCCTCCTCTATATGTAGCTACCCCAATGGGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGATATGGCTCCCCTCCTCCTCTATATGTAGCTACCCCAATGGGCT  837

seq1  ATGGAGTTCCACCTCCTGGATATGGACCTCCACCTGTGAGATACGGATCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTTCCACCTCCTGGATATGGACCTCCACCTGTGAGATACGGATCC  887

seq1  CCACCTCCTGGATATGAAGCCCCCACTATGGAGTATGGAGCCCAACCTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCCTGGATATGAAGCCCCCACTATGGAGTATGGAGCCCAACCTCC  937

seq1  CAGATACGGAACTACACCTATGGGATCCGGTTCCCCACCTCCCAGATATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACGGAACTACACCTATGGGATCCGGTTCCCCACCTCCCAGATATG  987

seq1  AAGCCCCGCCTATGGGGTATGGAACTCCTCCTTCAGGGCGTGAGTCCATA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCGCCTATGGGGTATGGAACTCCTCCTTCAGGGCGTGAGTCCATA  1037

seq1  CCTCCTGGATCAAGGGCCACGTCTGTAGCACAGGAAGCTCCACCTGCTGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGGATCAAGGGCCACGTCTGTAGCACAGGAAGCTCCACCTGCTGG  1087

seq1  GTCTGAAGCAGGCCATCCCATGTCTGTGGCAGTCCAGAATCCTGAATTC  1147
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAGCAGGCCATCCCATGTCTGTGGCAGTCCAGAATCCTGAATTC  1136

seq1: chr15_81989440_81990568
seq2: B6Ng01-071O17.g_68_1178

seq1  GAATTCCAGATGTTTGAGGCACTAAAGAAGGACTTGGGGAAGTCTTCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATGTTTGAGGCACTAAAGAAGGACTTGGGGAAGTCTTCACA  50

seq1  AGGACTTTGGCTAAGTTGTAAATGAAGGGTGGGTGAGCAGATGCGTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTTGGCTAAGTTGTAAATGAAGGGTGGGTGAGCAGATGCGTGTTT  100

seq1  GTAAAATTATTTATTTGTATTTTATGTACATTGGTGTTTTGCTTGGGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATTATTTATTTGTATTTTATGTACATTGGTGTTTTGCTTGGGTGC  150

seq1  ACGTCTGTGTGAGGCAGTCAGATTTTGGAGTTACAGTTGTGAGCTGCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTGTGTGAGGCAGTCAGATTTTGGAGTTACAGTTGTGAGCTGCCAT  200

seq1  GTGGGGGCTGGGAATTGGGCCTGGGTCCTCTAGAAGAGCGGTCAGCAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGCTGGGAATTGGGCCTGGGTCCTCTAGAAGAGCGGTCAGCAAGT  250

seq1  ACACTTTTCTGCTGAGCCATCTCTCCAGCCCCTAGCAGAACCGTTCTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTTCTGCTGAGCCATCTCTCCAGCCCCTAGCAGAACCGTTCTTGA  300

seq1  TAAACTGTTACCTTCTCAACCCCTTTTAATCAGGCCCTTCTATGCTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGTTACCTTCTCAACCCCTTTTAATCAGGCCCTTCTATGCTTCAG  350

seq1  TGTATTCTCTATCTGACAAGCTTGAGTTAAAAGCAAGGGTTTACTTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCTCTATCTGACAAGCTTGAGTTAAAAGCAAGGGTTTACTTGAGG  400

seq1  GAGGGGAGTACATGTATTGATTGACAATCTAGAAAGCTGGGCTTGGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAGTACATGTATTGATTGACAATCTAGAAAGCTGGGCTTGGAAAA  450

seq1  TGGGTTTGAATCCAGAGAGGCTCAGCGGTGCCAGAGCCCAGCCAGGGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTGAATCCAGAGAGGCTCAGCGGTGCCAGAGCCCAGCCAGGGTTA  500

seq1  GGATAAACAGCAGCCTGCTCAGGACCCCGCCTTCCTGACGACCTGTTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAACAGCAGCCTGCTCAGGACCCCGCCTTCCTGACGACCTGTTGGG  550

seq1  TCCTTTCCTGAGTAGGAGCAGGCCTTAATCAGAGTTGACTTGTAGGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCTGAGTAGGAGCAGGCCTTAATCAGAGTTGACTTGTAGGCAGC  600

seq1  CTTGTCAAGACATGCCTGGTGGGCATTCTCCAGAGGACCAGTGGGATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCAAGACATGCCTGGTGGGCATTCTCCAGAGGACCAGTGGGATGCT  650

seq1  CATGGTGTGTGTGCGTGTGCGTGATGAAACGAAATGACAGCTGTCCATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGTGTGTGCGTGTGCGTGATGAAACGAAATGACAGCTGTCCATTG  700

seq1  CTGCTCCTCTCTGGTGATGATGTCATTACGGCCTTCACCTAAGGCAGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTCTCTGGTGATGATGTCATTACGGCCTTCACCTAAGGCAGCTC  750

seq1  CATCCATCCATCCCTCTCGCGTTCCAGGATCTCTGCATTGTCAATTTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATCCATCCCTCTCGCGTTCCAGGATCTCTGCATTGTCAATTTGCA  800

seq1  GGGCATCTCCTGGTGCTGTTTTGTTGCTGTTTTCCCTCAAACTGTTCCTT  850
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGGCATCTCCTGGTGCTGTTTTGTTGCTGTTTTCCCTC-AACTGTTCCTT  849

seq1  TTTCCTTGAATGCGCTTCCATCCCTTTAGCTCTTAGAACCCCTTTTATCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGAATGCGCTTCCATCCCTTTAGCTCTTAGAACCCCTTTTATCC  899

seq1  AGGGTTCAGCTTTCAGTCGCCCAGAGTGGTCCTTTCCTCCTTACAGCCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTCAGCTTTCAGTCGCCCAGAGTGGTCCTTTCCTCCTTACAGCCTT  949

seq1  ACATGTTTGAGGCATCTGACTCCCTTATGGCGAAGCTGGTGGAACTGGTT  1000
      ||||| |||| ||||||||||||||||||||| ||||||||| |||||||
seq2  ACATG-TTGA-GCATCTGACTCCCTTATGGCG-AGCTGGTGG-ACTGGTT  995

seq1  GGGTCTCTGTCCTCTCTGGGATTCTCTTGAATATGTTAGACAAGCATTCT  1050
      |||||||||| ||||||||||||||| || ||||| |||||| |||||||
seq2  GGGTCTCTGTACTCTCTGGGATTCTC-TGCATATG-TAGACAGGCATTCT  1043

seq1  ACCACGAGTACCACTAGGCTGCATCCCAGTGTGCCTCCCCCCTCACCCCC  1100
      |||||||||  ||||| ||||||| |||| |||| |   ||||||    |
seq2  ACCACGAGTTACACTA-GCTGCAT-CCAG-GTGCTT---CCCTCA----C  1083

seq1  CACT-TTTAGGCACAGTCTCAGTGCAGCAG  1129
      ||||  ||||  ||||||||||||||||||
seq2  CACTACTTAG--ACAGTCTCAGTGCAGCAG  1111