BAC Information

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BAC

Clone NameB6Ng01-073N20
Chromosome15 (Build37)12 (Build37)
Map Location 42,320,573 - 42,321,63779,720,246 - 79,720,284
singlet/doubletsingletsinglet
Overlap geneAngpt1
Upstream geneOxr1, Abra, EG432946, LOC432947, LOC100039268, LOC100039197
Downstream geneRspo2, LOC675960, Eif3s6, Ttc35
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073N20.bB6Ng01-073N20.g
ACCDH890870DH890871
length1,074873
definitionDH890870|Mus musculus domesticus DNA, BAC clone: B6Ng01-073N20, 5' end.DH890871|Mus musculus domesticus DNA, BAC clone: B6Ng01-073N20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(42,320,573 - 42,321,637)(79,720,246 - 79,720,284)
sequence
gaattctttatagaacggatttaaaataaatagtaacaccagcaaattag
ggggtagacattagtggatagtgtgatggggagagatgataaggatgatg
ttccctccccagcagaaggtaaatgtaaagccatctacttttaataaagg
tacagggagatttgggagctgggatgtgactatgataggcaaagttaatt
gcatagctcatttgcatggatggaagaatatctgcattcaaaaaaacttg
aatttcaaaggacaggtgaaagttttacgttgggaaatgcacaggagaga
aaggaaacaaaaaatgagtaaaaaggacacggggataggaatatattcaa
tatacagaggatatagaaataggaatatactcagtgtacagaggacacag
ggataggaatatattcagtgtacagaggatatgaggggtaagaatgtact
tagtgtacacaagacatgcggacaggaatatcctcagtgtacagaggaca
cggggataggaatatcctcagtgtacagaggacacggggataggaatata
ctcagtgcacagaggacacagtaataggaataacctcagtgtacagagga
catgggataggaatatcctcagtgtacagaggacacaggaataggaatat
cctcagtgtacagaggacatggggataggaatatactcagtgtgcagagg
acatggggataggaatatcctcagtgtgcagaggacatggggataggaat
atcctcagtgtacagaggacacagggataggaatatcctcagtgtgcaga
ggacatggggataggaatatactcagtgtgcagaggacatggggttagga
atatactcagtgtacagaggacatggaggataggatatactcagtgtaca
taggacaagggataggatatcctcagtgtacagaggacacaggaataagg
aacatcctcattgtaccagatgacaggataaggaattatcttcagtgtaa
cagaggactataggaataggaatattccttcagtgtaacagaaggacacc
aagggaaaggaatatcctcagtgt
gaattcatttatttgcagcactgagtgctatcaagtttcttttagcacta
ctttcattgtgtcccattaatctgggtatgttatgtcttcattttcattg
aattctagaatgtctttaatttctttattttttttcttgacccagagatc
attggatagagtttttctatttacaagagtgtgtaggttttctagtgttc
tgttgttgttgaattccagctttaatccacagtggtatgataaggtacaa
ggcattacttcaattttcttgtatctgttgaggcttgttttgcgactgac
tatatggtcaattttgaagaaggatccatgaggtgctaagaagctacatt
tttttgggtgaattattctatagatgtttgttaggtccatttgattcata
atgtctgttagtttcattatttttctgtttactttttgtctcaatatcct
gtaagttagtgagagtggggtattgaagtcttccactattaatatgtggg
gttcaatgtgtgatttgggctttagcaatgtttcttttacaaatgtgagt
actcttgtgtttgcggcatagacgttcataattgagatatcatctcagta
tattttacctttgatgagagtgaagcatccttccctgtctcttttgatta
attttggatgaaaaacctattttattagatatttgaatggcttcttcagc
ttgcttcatgggtctgtttgcttggaaaacatttttccatccctttactc
cgaggtagtgtttatctttattgctgaggtgtgtttcctgcatgaagaaa
aaatgttgcatcctgttttctgcttccattccgttgttagcctatgtctt
tttatgggggaattgagttcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_42320573_42321637
seq2: B6Ng01-073N20.b_47_1120 (reverse)

seq1  ACACTGAGGATATTCCTATCCCT--GTGTCC-TCTG-TACACTGA--GGA  44
      ||||||||||||||||| |||||  |||||| |||| ||||||||  | |
seq2  ACACTGAGGATATTCCTTTCCCTTGGTGTCCTTCTGTTACACTGAAGGAA  50

seq1  TATTCCTATTCCTGT-GTCCTCTG-TACACTGAGGAT-ATTCC-TATCCC  90
      ||||||||||||| | |||||||| |||||||| ||| ||||| ||||| 
seq2  TATTCCTATTCCTATAGTCCTCTGTTACACTGAAGATAATTCCTTATCC-  99

seq1  TTGTCCTCT-GTACACTGAGGATGTTCC-TATTCCTGTGTCCTCTGTACA  138
       |||| ||| ||||| |||||||||||| |||||||||||||||||||||
seq2  -TGTCATCTGGTACAATGAGGATGTTCCTTATTCCTGTGTCCTCTGTACA  148

seq1  CTGAGGATATTCCTATCCCTTGTCCTATGTACACTGAGTATATTCCTATC  188
      ||||||||| |||||||||||||||||||||||||||||||| |||||||
seq2  CTGAGGATA-TCCTATCCCTTGTCCTATGTACACTGAGTATA-TCCTATC  196

seq1  CT-CATGTCCTCTGTACACTGAGTATATTCCTAACCCCATGTCCTCTGCA  237
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGTCCTCTGTACACTGAGTATATTCCTAACCCCATGTCCTCTGCA  246

seq1  CACTGAGTATATTCCTATCCCCATGTCCTCTGCACACTGAGGATATTCCT  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGTATATTCCTATCCCCATGTCCTCTGCACACTGAGGATATTCCT  296

seq1  ATCCCTGTGTCCTCTGTACACTGAGGATATTCCTATCCCCATGTCCTCTG  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGTGTCCTCTGTACACTGAGGATATTCCTATCCCCATGTCCTCTG  346

seq1  CACACTGAGGATATTCCTATCCCCATGTCCTCTGCACACTGAGTATATTC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGAGGATATTCCTATCCCCATGTCCTCTGCACACTGAGTATATTC  396

seq1  CTATCCCCATGTCCTCTGTACACTGAGGATATTCCTATTCCTGTGTCCTC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCCCATGTCCTCTGTACACTGAGGATATTCCTATTCCTGTGTCCTC  446

seq1  TGTACACTGAGGATATTCCTATCCCATGTCCTCTGTACACTGAGGTTATT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACTGAGGATATTCCTATCCCATGTCCTCTGTACACTGAGGTTATT  496

seq1  CCTATTACTGTGTCCTCTGTGCACTGAGTATATTCCTATCCCCGTGTCCT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTACTGTGTCCTCTGTGCACTGAGTATATTCCTATCCCCGTGTCCT  546

seq1  CTGTACACTGAGGATATTCCTATCCCCGTGTCCTCTGTACACTGAGGATA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACACTGAGGATATTCCTATCCCCGTGTCCTCTGTACACTGAGGATA  596

seq1  TTCCTGTCCGCATGTCTTGTGTACACTAAGTACATTCTTACCCCTCATAT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTCCGCATGTCTTGTGTACACTAAGTACATTCTTACCCCTCATAT  646

seq1  CCTCTGTACACTGAATATATTCCTATCCCTGTGTCCTCTGTACACTGAGT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTACACTGAATATATTCCTATCCCTGTGTCCTCTGTACACTGAGT  696

seq1  ATATTCCTATTTCTATATCCTCTGTATATTGAATATATTCCTATCCCCGT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCTATTTCTATATCCTCTGTATATTGAATATATTCCTATCCCCGT  746

seq1  GTCCTTTTTACTCATTTTTTGTTTCCTTTCTCTCCTGTGCATTTCCCAAC  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTTTACTCATTTTTTGTTTCCTTTCTCTCCTGTGCATTTCCCAAC  796

seq1  GTAAAACTTTCACCTGTCCTTTGAAATTCAAGTTTTTTTGAATGCAGATA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACTTTCACCTGTCCTTTGAAATTCAAGTTTTTTTGAATGCAGATA  846

seq1  TTCTTCCATCCATGCAAATGAGCTATGCAATTAACTTTGCCTATCATAGT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCATCCATGCAAATGAGCTATGCAATTAACTTTGCCTATCATAGT  896

seq1  CACATCCCAGCTCCCAAATCTCCCTGTACCTTTATTAAAAGTAGATGGCT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCCAGCTCCCAAATCTCCCTGTACCTTTATTAAAAGTAGATGGCT  946

seq1  TTACATTTACCTTCTGCTGGGGAGGGAACATCATCCTTATCATCTCTCCC  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTACCTTCTGCTGGGGAGGGAACATCATCCTTATCATCTCTCCC  996

seq1  CATCACACTATCCACTAATGTCTACCCCCTAATTTGCTGGTGTTACTATT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACACTATCCACTAATGTCTACCCCCTAATTTGCTGGTGTTACTATT  1046

seq1  TATTTTAAATCCGTTCTATAAAGAATTC  1065
      ||||||||||||||||||||||||||||
seq2  TATTTTAAATCCGTTCTATAAAGAATTC  1074

seq1: chr12_79720246_79720284
seq2: B6Ng01-073N20.g_906_944 (reverse)

seq1  AATGGACTCAATTCCCCAATAAAAAGACATAGGCAAACA  39
      |||| |||||||||||| |||||||||||||||| ||||
seq2  AATGAACTCAATTCCCCCATAAAAAGACATAGGCTAACA  39