BAC Information

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BAC

Clone NameB6Ng01-074A12
Chromosome15 (Build37)
Map Location 11,698,829 - 11,796,446
singlet/doubletdoublet
Overlap geneNpr3
Upstream geneC1qtnf3, Amacr, Slc45a2, Rxfp3, Adamts12, Tars, LOC100039772
Downstream geneLOC381002, Sub1, LOC100040027, Zfr, LOC100040052, LOC100040066, Mtmr12, LOC100039846, Golph3, Pdzd2, LOC100040109, 6030458C11Rik, Rnasen
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074A12.bB6Ng01-074A12.g
ACCDH890993DH890994
length1,116588
definitionDH890993|Mus musculus domesticus DNA, BAC clone: B6Ng01-074A12, 5' end.DH890994|Mus musculus domesticus DNA, BAC clone: B6Ng01-074A12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,795,328 - 11,796,446)(11,698,829 - 11,699,416)
sequence
gaattcactgattgagatcaccagctgcagtatgagcctccctccatgtg
ttggtctggaagtcttgcccttaagcagtaggtgcggaacccaagttaca
gcattctcagccaacagtgcccaaagaaggcctttgaacagctaaaacat
agtgttatttattggttttatcatgggagaggccctcaaatcctttcttt
gaatccagttattccatttctgttctgatgggatcttacaatgttgccca
gactggcctcaggcatgtgagctttagtgatgtggatctcagcctcctga
gtcacagggactatggttacacaatatcttacctgttttaccctcatttt
aaatattgctgtaacaagcgctgggatttcttcccctagtttacagaaga
ttaggattagcgaaaaaccaagatggcagcatctagatgctagaagcagg
cataggtgagaatagtgggaagtggcaggtgacagttaggtcaactcaat
caaatgaagttcctgtatcagatgccagggccttgagcctacaaaaagag
atatacctgtaatatggccggtatactcaggaatggtgcaatgtctaggt
atgcagccttgcaaatattcaaaagagattgatgagtgaaatgattcaag
tttgtgctaagtgcagctgcagtggaaaggagggtttgggtggccggagg
aggtttctgtaagatcaagtgtgagtggacccctgaaagtgagtgtatct
atgaacgtcctgggaggagagagatggcctgcctaagagaagtaacagag
tttgataaaggtactatttgcaaaggggcaggtacggaggaggaatagag
gggtcgtggaaaaacagtataagatggcaagctattacagacctaggctg
aaggtgggagagaaggggagataccaaactgtaaggcctatagcaattgg
aaagagccttctgtgtatttgttgaagacagcagtcctgacactcaacct
tggacctctctctgagtttcctgtcttcctctgccctggtgtctctctct
tcttttcctgctgtctttgttgctggtgtctgcatgtcacctgttgctga
acctgccctcctgtta
gaattcacttcctgtctctggaccatccatctcctttttatttctttata
aagtttgcacccctgcatctagaacagtgttcctcaatcctgttagcttc
atccctgtaagcaaaagagcttctcagggtctactccttgcaatttgcta
ccattggcattgctaaaaatagtcttagcctcttctgtatttgccaggca
ctggcatagcctcacacgagacagttatatcagggtcccttcagaaaaat
cttgctggcattttcaatagtgtctgagtttggtggctgattatgggatg
gatcctcaggtggatgctcacagtcatctataggatggaacacagggccc
ccaatgaaggagctagagaaagtacccaaggagctgaaggggtctgcaac
cctataggtggaaccacagtatgaactaaccagtaccctcagagctcgtt
tctctagctgcatatgtagcagaagatggcctagttggccattattggga
agagaggaccctaggtcttgaaaactttatatgccccagtacaggggaat
gccaggaccaagaagtgggagtgggtgggtaggggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_11795328_11796446
seq2: B6Ng01-074A12.b_44_1158 (reverse)

seq1  AACAGAAGGGCAGGTTCAGACAACAGGTGACATGCAAGACACCAGCAACA  50
      ||||| ||||||||||||| ||||||||||||||| ||||||||||||||
seq2  AACAGGAGGGCAGGTTCAG-CAACAGGTGACATGC-AGACACCAGCAACA  48

seq1  AAGACAGCAGAAAAAGAAGAGAAGAGACACCAGGGCAGAGGAAGACAGGA  100
      |||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  AAGACAGCAGGAAAAGAAGAG-AGAGACACCAGGGCAGAGGAAGACAGGA  97

seq1  AACTCAGAGAGAGGTCC-AGGTTGAGTGTCAGGACCTGCTGTCTTCCACA  149
      ||||||||||||||||| |||||||||||||||| ||||||||||| |||
seq2  AACTCAGAGAGAGGTCCAAGGTTGAGTGTCAGGA-CTGCTGTCTTCAACA  146

seq1  AATACCACAGAAGGCTCTTTCCAATTGCTATAGGCCTTACAGTTTGGTAT  199
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATA-CACAGAAGGCTCTTTCCAATTGCTATAGGCCTTACAGTTTGGTAT  195

seq1  CTCCCCTTCTCTCCCACCTTCAGCCTAGGTCTGTAATAGCTTGCCATCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTTCTCTCCCACCTTCAGCCTAGGTCTGTAATAGCTTGCCATCTT  245

seq1  ATACTGTTTTTCCACGACCCCTCTTTTCCTCCTCCGTACCTGCCCCTTTG  299
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATACTGTTTTTCCACGACCCCTCTATTCCTCCTCCGTACCTGCCCCTTTG  295

seq1  CAAATAGTACCTTTATCAAACTCTGTTACTTCTCTTAGGCAGGCCATCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGTACCTTTATCAAACTCTGTTACTTCTCTTAGGCAGGCCATCTC  345

seq1  TCTCCTCCCAGGACGTTCATAGATACACTCACTTTCAGGGGTCCACTCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCCAGGACGTTCATAGATACACTCACTTTCAGGGGTCCACTCAC  395

seq1  ACTTGATCTTACAGAAACCTCCTCCGGCCACCCAAACCCTCCTTTCCACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATCTTACAGAAACCTCCTCCGGCCACCCAAACCCTCCTTTCCACT  445

seq1  GCAGCTGCACTTAGCACAAACTTGAATCATTTCACTCATCAATCTCTTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGCACTTAGCACAAACTTGAATCATTTCACTCATCAATCTCTTTT  495

seq1  GAATATTTGCAAGGCTGCATACCTAGACATTGCACCATTCCTGAGTATAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTGCAAGGCTGCATACCTAGACATTGCACCATTCCTGAGTATAC  545

seq1  CGGCCATATTACAGGTATATCTCTTTTTGTAGGCTCAAGGCCCTGGCATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCATATTACAGGTATATCTCTTTTTGTAGGCTCAAGGCCCTGGCATC  595

seq1  TGATACAGGAACTTCATTTGATTGAGTTGACCTAACTGTCACCTGCCACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAGGAACTTCATTTGATTGAGTTGACCTAACTGTCACCTGCCACT  645

seq1  TCCCACTATTCTCACCTATGCCTGCTTCTAGCATCTAGATGCTGCCATCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTATTCTCACCTATGCCTGCTTCTAGCATCTAGATGCTGCCATCT  695

seq1  TGGTTTTTCGCTAATCCTAATCTTCTGTAAACTAGGGGAAGAAATCCCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTCGCTAATCCTAATCTTCTGTAAACTAGGGGAAGAAATCCCAG  745

seq1  CGCTTGTTACAGCAATATTTAAAATGAGGGTAAAACAGGTAAGATATTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTGTTACAGCAATATTTAAAATGAGGGTAAAACAGGTAAGATATTGT  795

seq1  GTAACCATAGTCCCTGTGACTCAGGAGGCTGAGATCCACATCACTAAAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCATAGTCCCTGTGACTCAGGAGGCTGAGATCCACATCACTAAAGC  845

seq1  TCACATGCCTGAGGCCAGTCTGGGCAACATTGTAAGATCCCATCAGAACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGCCTGAGGCCAGTCTGGGCAACATTGTAAGATCCCATCAGAACA  895

seq1  GAAATGGAATAACTGGATTCAAAGAAAGGATTTGAGGGCCTCTCCCATGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGAATAACTGGATTCAAAGAAAGGATTTGAGGGCCTCTCCCATGA  945

seq1  TAAAACCAATAAATAACACTATGTTTTAGCTGTTCAAAGGCCTTCTTTGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCAATAAATAACACTATGTTTTAGCTGTTCAAAGGCCTTCTTTGG  995

seq1  GCACTGTTGGCTGAGAATGCTGTAACTTGGGTTCCGCACCTACTGCTTAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTTGGCTGAGAATGCTGTAACTTGGGTTCCGCACCTACTGCTTAA  1045

seq1  GGGCAAGACTTCCAGACCAACACATGGAGGGAGGCTCATACTGCAGCTGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGACTTCCAGACCAACACATGGAGGGAGGCTCATACTGCAGCTGG  1095

seq1  TGATCTCAATCAGTGAATTC  1119
      ||||||||||||||||||||
seq2  TGATCTCAATCAGTGAATTC  1115

seq1: chr15_11698829_11699416
seq2: B6Ng01-074A12.g_72_659

seq1  GAATTCACTTCCTGTCTCTGGACCATCCATCTCCTTTTTATTTCTTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCCTGTCTCTGGACCATCCATCTCCTTTTTATTTCTTTATA  50

seq1  AAGTTTGCACCCCTGCATCTAGAACAGTGTTCCTCAATCCTGTTAGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGCACCCCTGCATCTAGAACAGTGTTCCTCAATCCTGTTAGCTTC  100

seq1  ATCCCTGTAAGCAAAAGAGCTTCTCAGGGTCTACTCCTTGCAATTTGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGTAAGCAAAAGAGCTTCTCAGGGTCTACTCCTTGCAATTTGCTA  150

seq1  CCATTGGCATTGCTAAAAATAGTCTTAGCCTCTTCTGTATTTGCCAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGGCATTGCTAAAAATAGTCTTAGCCTCTTCTGTATTTGCCAGGCA  200

seq1  CTGGCATAGCCTCACACGAGACAGTTATATCAGGGTCCCTTCAGAAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATAGCCTCACACGAGACAGTTATATCAGGGTCCCTTCAGAAAAAT  250

seq1  CTTGCTGGCATTTTCAATAGTGTCTGAGTTTGGTGGCTGATTATGGGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGGCATTTTCAATAGTGTCTGAGTTTGGTGGCTGATTATGGGATG  300

seq1  GATCCTCAGGTGGATGCTCACAGTCATCTATAGGATGGAACACAGGGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCAGGTGGATGCTCACAGTCATCTATAGGATGGAACACAGGGCCC  350

seq1  CCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGGTCTGCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGGTCTGCAAC  400

seq1  CCTATAGGTGGAACCACAGTATGAACTAACCAGTACCCTCAGAGCTCGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAGGTGGAACCACAGTATGAACTAACCAGTACCCTCAGAGCTCGTT  450

seq1  TCTCTAGCTGCATATGTAGCAGAAGATGGCCTAGTTGGCCATTATTGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGCTGCATATGTAGCAGAAGATGGCCTAGTTGGCCATTATTGGGA  500

seq1  AGAGAGGACCCTAGGTCTTGAAAACTTTATATGCCCCAGTACAGGGGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGACCCTAGGTCTTGAAAACTTTATATGCCCCAGTACAGGGGAAT  550

seq1  GCCAGGACCAAGAAGTGGGAGTGGGTGGGTAGGGGAGC  588
      ||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGACCAAGAAGTGGGAGTGGGTGGGTAGGGGAGC  588