BAC Information

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BAC

Clone NameB6Ng01-075H10
Chromosome15 (Build37)
Map Location 81,256,160 - 81,364,444
singlet/doubletdoublet
Overlap geneXpnpep3, Rbx1, EG383080
Upstream geneEnthd1, Grap2, AW544981, Tnrc6b, Adsl, LOC625672, Rutbc3, Mkl1, LOC675966, Mchr1, Slc25a17, St13, Dnajb7
Downstream geneEp300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075H10.bB6Ng01-075H10.g
ACCDH892017DH892018
length248446
definitionDH892017|Mus musculus domesticus DNA, BAC clone: B6Ng01-075H10, 5' end.DH892018|Mus musculus domesticus DNA, BAC clone: B6Ng01-075H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,364,197 - 81,364,444)(81,256,160 - 81,256,611)
sequence
gaattccaagccatccaggactatattacttttctcaaaaaaaaaaaaaa
aagagaaaaagaaaagaaagaaaaggacaacccaggcaaaggttgaggga
tgtagctgtatgaataggaagatgaatggagcagagagagcaggcagaaa
tttgttattattatttattaaaatttttggactgggcggtagtagcatac
tcctttaatcccagcactcgggaggcagaggcaggcagatatctgagt
agaaatattctttggttggtttgtttgggttttggtttggtttgtttggt
tggttggtttggtttttgagacagggtttcaaaatagaagccctggaact
cactttgtagaccagattgacctcaaatttagagatccaccagcctctgc
ctcctgagtactgggattaaaggtggtcaccactgccacctggctgagat
tatttttattaagagatcttgaaattggagaaaattttttaccaattgta
taacaaaacctatagaccataaggaaacatttaccaagtctaccttggta
atatgttgaacagacagaaatctatgtccttgtggaagttgcattcattt
tatagggaagtcatatagaaataatgtatcaagatgtatttaatatattg
aaatttcagggaaactttgactatatgcctaacagttcataccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_81364197_81364444
seq2: B6Ng01-075H10.b_29_276 (reverse)

seq1  ACTCAGATATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGATATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGAGT  50

seq1  ATGCTACTACCGCCCAGTCCAAAAATTTTAATAAATAATAATAACAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTACTACCGCCCAGTCCAAAAATTTTAATAAATAATAATAACAAATT  100

seq1  TCTGCCTGCTCTCTCTGCTCCATTCATCTTCCTATTCATACAGCTACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGCTCTCTCTGCTCCATTCATCTTCCTATTCATACAGCTACATC  150

seq1  CCTCAACCTTTGCCTGGGTTGTCCTTTTCTTTCTTTTCTTTTTCTCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACCTTTGCCTGGGTTGTCCTTTTCTTTCTTTTCTTTTTCTCTTTT  200

seq1  TTTTTTTTTTTTGAGACAACTAATATAGTCCTGGATGGCTTGGAATTC  248
      |||||||||||||||| || ||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTGAGAAAAGTAATATAGTCCTGGATGGCTTGGAATTC  248

seq1: chr15_81256160_81256611
seq2: B6Ng01-075H10.g_68_519

seq1  GAATTCAGAAATATTCTTTGGTTGGTTTGTTTGGGTTTTGGTTTGGTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAATATTCTTTGGTTGGTTTGTTTGGGTTTTGGTTTGGTTTG  50

seq1  TTTGGTTGGTTGGTTTGGTTTTTGAGACAGGGTTTCAAAATAGAAGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTGGTTGGTTTGGTTTTTGAGACAGGGTTTCAAAATAGAAGCCCT  100

seq1  GGAACTCACTTTGTAGACCAGATTGACCTCAAATTTAGAGATCCACCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCACTTTGTAGACCAGATTGACCTCAAATTTAGAGATCCACCAGC  150

seq1  CTCTGCCTCCTGAGTACTGGGATTAAAGGTGGTCACCACTGCCACCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTCCTGAGTACTGGGATTAAAGGTGGTCACCACTGCCACCTGGC  200

seq1  TGAGATTATTTTTATTAAGAGATCTTGAAATTGGAGAAAATTTTTTACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTATTTTTATTAAGAGATCTTGAAATTGGAGAAAATTTTTTACCA  250

seq1  ATTGTATAACAAAACCTATAGACCATAAGGAAACATTTACCAAGTCTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATAACAAAACCTATAGACCATAAGGAAACATTTACCAAGTCTACC  300

seq1  TTGGTAATATGTTGAACAGACAGAAATCTATGTCCTTGTGGAAGTTGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAATATGTTGAACAGACAGAAATCTATGTCCTTGTGGAAGTTGCAT  350

seq1  TCATTTTATAGGGAAGTCATATAGAAATAATGTATCAAGATGTATTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTATAGGGAAGTCATATAGAAATAATGTATCAAGATGTATTTAAT  400

seq1  ATATTGAAATTTCAGGGAAACTTTGACTATATGCCTAACAGTTCATACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAAATTTCAGGGAAACTTTGACTATATGCCTAACAGTTCATACCA  450

seq1  CA  452
      ||
seq2  CA  452