BAC Information

Click to search

BAC

Clone NameB6Ng01-077M10
Chromosome15 (Build37)
Map Location 28,599,491 - 28,600,673
singlet/doubletsinglet
Overlap genenone
Upstream geneBC052328, Trio, LOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689
Downstream geneLOC100040702, LOC667153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077M10.bB6Ng01-077M10.g
ACCDH893662DH893663
length1,2181,169
definitionDH893662|Mus musculus domesticus DNA, BAC clone: B6Ng01-077M10, 5' end.DH893663|Mus musculus domesticus DNA, BAC clone: B6Ng01-077M10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctatgaggccacagttaactctgatacttaaactacgcaaa
ggctcaacaaaaaagagaacttcagatcaattttgcgtatgaatattgat
acaaaaatactcaataaaattctctcaaacataatccaaaaacacatcaa
aaatttcattgaccatgattaaggaggcttcttcccagggatgcagggat
ggctcagtgtatgaaaacccatcaatgtaatcctaccatataaatgaact
gaaagaaaaactcacaggatcatctctccttagatgatggataatactgt
gtcaaaacccaacaccacctcatgttaaaagtcttggtgagatcagaatt
caaagcacacacattaacacatcaagagcaatacataataagataatagc
caacatcaaattaaatggagagaaacttgaagcaatcccactaaaatcca
gggcaagatatagctgcccgctctctccctatctattcaatatagtactc
aaagttgtagctagagcaataagacaacaaaaggagataaaggagacaca
aactggcaaagaagaagtcaaggtatcactattcgcacatgctatgatag
tatacttgtgatcctcaaaatcctaccagagaattcctacagctaatgaa
caacttcagcaaagtggctggatataaaattaattcaaagaaatcagtag
ccctcctttatacaaatgataaatgggaaaataaagcaattagggagata
ccactcttcacaataggcacaaataatataacatatcttgatgtaattct
aaccaagcaagtgaaagatccatatgacaagaatttcaagtgactgaatt
aagaaactgaagaagataccataaaatagaaagctctcccatgctcatat
attggtaggattaacagtaaaaatagccatcttaccaaaggcaatcttca
gattcattgcaatcctcatcaaactccaacacaaatttctacagaccttg
aagagcaatctcatttatatggaacaacaaacaataacaacaaacaaaaa
cagatacaaacatcttgacataaaactctggagaataccattctgacctc
agctatctcagagcagaaactgccgaggttaaaccatgatgttgaatcga
caagtgatcatggatagtggacgatacccacactgtgacttgaatgtgcc
agaatcaagccctcatga
gaattcaaaacacctagatatcaaaaataaactaattaaaattatgtcta
agagaattcacaaaataggaaactcaaatggctgtgaaaaaacaaacaaa
caaaaacaaacagaaaagttcagcatcaccaaggaaatgcattctgacac
acagcaaaatgaccaaggtctagtagtcatctccttaccctcataagaag
aaatcagagctaacattatgcttctcaggagaagataaccaaataactgc
tgtggttccctccatattgagacacaataactcagcaaataataatcgga
tcccgactctgtttcccagcagtaagtgtcagtgaggaatattccatatt
ttatgtgtgacagatgtagataatgaccagtgggtgtcaaggaaacttgg
ctagattaggtttggatacaagagcacaagaccctacaaggtagggaagc
tctagcacagtggttctcaacctgcctaaagcagtgaccctttaatattg
ttctgcgtgttatggtgacccccacccataaagttattctgttgttactt
cataactgtaattttgctactagaatgaatcaaaaatgtaagtatcagat
atacaggatatctgtattgtgacccctgtggaagttctttgattcccaaa
gaggcttcaacttgcttgttgaaaaatactgctctacagctaaatacatt
tggctcgttcaagtgattcttcagtcccaggttagatgtgaaatcttttt
tcaagcagtcccatttaattaactaaataaacattaagctttgttttatt
aactttcttgtgtggcacagaaatggaaagattagagctctgatgctaaa
tatgtttacttacatgggagttagcataatcattctttgccaaggtgcct
tgcaccttgaagacttattcagaaatttctgtgtagtaattagcacctgt
tctgggccttggggaatttgtaaggtttgaatggggaggaaacagatgag
tttcccattaagagaggatcatatgagcaactcccagtcagggaatcaga
atcattggaattctagatgaggacaaagaagaatagagtaaagattcgat
ggaaaagtttgtcagtttctcaatctggagtggtgaacatttattatctt
ggtaatttatttatttagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28599491_28600673
seq2: B6Ng01-077M10.g_70_1238 (reverse)

seq1  GCTAAATAAAATAAAATTAACCAGGATAATATATGCTACAACA-TTCAGA  49
      ||||||| |||||||  | |||| ||||||| ||| | || || | ||||
seq2  GCTAAAT-AAATAAA--TTACCAAGATAATAAATG-TTCACCACTCCAGA  46

seq1  TTTAGAAAACTGACAAACATATTTCCATTCTGAATCTCTACTCTTAATCT  99
      || || ||||||||||||   |||||||   |||||| ||||| || |||
seq2  TTGAG-AAACTGACAAAC--TTTTCCAT--CGAATCTTTACTC-TATTCT  90

seq1  TCTTTTGTCCTCATCTAGAATTCCAATGATTCCTGATTCCCTGACTGTGA  149
      || |||||||||||||||||||||||||||| ||||||||||||||| ||
seq2  TC-TTTGTCCTCATCTAGAATTCCAATGATT-CTGATTCCCTGACTGGGA  138

seq1  GTTTGCTCATATGATTCCTCTCTT-ATGTGAAACTTCCATCTGTTTCCTC  198
      | |||||||||||| ||||||||| ||| ||||||  |||||||||||||
seq2  G-TTGCTCATATGA-TCCTCTCTTAATGGGAAACT--CATCTGTTTCCTC  184

seq1  CCCATTCAAACCTTACAAATTCCCCAAGGCCCAGAACAGGTGCTAATTAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCAAACCTTACAAATTCCCCAAGGCCCAGAACAGGTGCTAATTAC  234

seq1  TACACAGAAATTTCTGGATAAGTCTTCAAGGTGCAAGGCACCTTGGCAAA  298
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TACACAGAAATTTCTGAATAAGTCTTCAAGGTGCAAGGCACCTTGGCAAA  284

seq1  GAATGATTATGCTAACTCCCATGTAAGTAAACATATTTAGCATCAGAGCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATTATGCTAACTCCCATGTAAGTAAACATATTTAGCATCAGAGCT  334

seq1  CTAATCTTTCCATTTCTGTGCCACACAAGAAAGTTAATAAAACAAAGCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCTTTCCATTTCTGTGCCACACAAGAAAGTTAATAAAACAAAGCTT  384

seq1  AATGTTTATTTAGTTAATTAAATGGGACTGCTTGAAAAAAGATTTCACAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTATTTAGTTAATTAAATGGGACTGCTTGAAAAAAGATTTCACAT  434

seq1  CTAACCTGGGACTGAAGAATCACTTGAACGAGCCAAATGTATTTAGCTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCTGGGACTGAAGAATCACTTGAACGAGCCAAATGTATTTAGCTGT  484

seq1  AGAGCAGTATTTTTCAACAAGCAAGTTGAAGCCTCTTTGGGAATCAAAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGTATTTTTCAACAAGCAAGTTGAAGCCTCTTTGGGAATCAAAGA  534

seq1  ACTTCCACAGGGGTCACAATACAGATATCCTGTATATCTGATACTTACAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCACAGGGGTCACAATACAGATATCCTGTATATCTGATACTTACAT  584

seq1  TTTTGATTCATTCTAGTAGCAAAATTACAGTTATGAAGTAACAACAGAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTCATTCTAGTAGCAAAATTACAGTTATGAAGTAACAACAGAAT  634

seq1  AACTTTATGGGTGGGGGTCACCATAACACGCAGAACAATATTAAAGGGTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTATGGGTGGGGGTCACCATAACACGCAGAACAATATTAAAGGGTC  684

seq1  ACTGCTTTAGGCAGGTTGAGAACCACTGTGCTAGAGCTTCCCTACCTTGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTTAGGCAGGTTGAGAACCACTGTGCTAGAGCTTCCCTACCTTGT  734

seq1  AGGGTCTTGTGCTCTTGTATCCAAACCTAATCTAGCCAAGTTTCCTTGAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTTGTGCTCTTGTATCCAAACCTAATCTAGCCAAGTTTCCTTGAC  784

seq1  ACCCACTGGTCATTATCTACATCTGTCACACATAAAATATGGAATATTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTGGTCATTATCTACATCTGTCACACATAAAATATGGAATATTCC  834

seq1  TCACTGACACTTACTGCTGGGAAACAGAGTCGGGATCCGATTATTATTTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGACACTTACTGCTGGGAAACAGAGTCGGGATCCGATTATTATTTG  884

seq1  CTGAGTTATTGTGTCTCAATATGGAGGGAACCACAGCAGTTATTTGGTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTATTGTGTCTCAATATGGAGGGAACCACAGCAGTTATTTGGTTA  934

seq1  TCTTCTCCTGAGAAGCATAATGTTAGCTCTGATTTCTTCTTATGAGGGTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCCTGAGAAGCATAATGTTAGCTCTGATTTCTTCTTATGAGGGTA  984

seq1  AGGAGATGACTACTAGACCTTGGTCATTTTGCTGTGTGTCAGAATGCATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATGACTACTAGACCTTGGTCATTTTGCTGTGTGTCAGAATGCATT  1034

seq1  TCCTTGGTGATGCTGAACTTTTCTGTTTGTTTTTGTTTGTTTGTTTTTTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGTGATGCTGAACTTTTCTGTTTGTTTTTGTTTGTTTGTTTTTTC  1084

seq1  ACAGCCATTTGAGTTTCCTATTTTGTGAATTCTCTTAGACATAATTTTAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCATTTGAGTTTCCTATTTTGTGAATTCTCTTAGACATAATTTTAA  1134

seq1  TTAGTTTATTTTTGATATCTAGGTGTTTTGAATTC  1183
      |||||||||||||||||||||||||||||||||||
seq2  TTAGTTTATTTTTGATATCTAGGTGTTTTGAATTC  1169