BAC Information

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BAC

Clone NameB6Ng01-078L20
Chromosome15 (Build37)
Map Location 26,778,936 - 26,954,351
singlet/doubletdoublet
Overlap geneFbxl7
Upstream gene1810015C04Rik, Zfp622, AK162044, LOC622531
Downstream geneLOC625311, Ank, BC087945, LOC100040622, BC052328, Trio
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078L20.bB6Ng01-078L20.g
ACCDH894356DH894357
length9561,177
definitionDH894356|Mus musculus domesticus DNA, BAC clone: B6Ng01-078L20, 5' end.DH894357|Mus musculus domesticus DNA, BAC clone: B6Ng01-078L20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,953,386 - 26,954,351)(26,778,936 - 26,780,133)
sequence
gaattcctccacctcgacaccacccctgtgtaccctcttccttcccagaa
atctctctatatttacatatactacttttgctttgtgacctactgagttt
ttctaggggttggaattttgggttggaacctggtagacacagcagcgagc
atacaactatagagagcatttttttttttttttttttttttttttttttt
ttttggcttccaaaaaatatcagtagcccgtagctcaaaaacaaaggggg
gagcccctcctacttccttgacttaggggaagactcttgggagcccctta
tagggaactatgggtagctgctgggagtaagttatggcactcattgtatt
gagtctagacaacagtgttatgtagcccttcaccccatccttcagctctt
tcatacttccttttctaaaaacattccctaagccatagcggggggattgg
aaattattttagggatgggcacccagtattgtttattttctatatctgag
ggagccacagtctctcttcatccccctcattcattgtaaaaagaagcctc
tttgatcaagggtagagagtgcttttgtccatgtataaatgattacatat
agaggctgcttttgtctatgcataaacgattacatatttatttcagaata
tataaacactatgggattgccagatcatacaataattctgataattttta
aaggaaacttacattaatttttatttccacccaacttaaacaagacttac
catttctcccactttttaccccaaggtcccttttgagaaaagccattctc
ctgtgtatgaggtgacatttccctgataatcaaccatactgagcattgtg
gcacacctgctgtccatgtgcgtgtcctcctagaagatgtctagtcagtc
cttttgcatttctaaaatgacgtctgtttttaactcgtgagtattgaata
cttaca
gaattctcacggaataggtgccgtttcctgactcgtgtcatgagacaagt
acacaggcagaagaaatcacccatggtttcatgttaagatacagaaagaa
gtacacagccagaagcagccccttcctatcccttacctatgtattgcatg
taatagatgctgcctgtttctgcttttactgttcctaaaaagatatgtcc
caggagcaattaagatggattttccatgtgattcagagcacaggcaacaa
attgagttttgtcctttagacaatttcacctcaggaggcatggatgctcc
aagcactgcaacactgtgctaaaggtccttgaaaaccagaatttactaac
tccatgacaggcttgctttctccttactccgctgctcctagttttctctc
taagttatgactgatacatcagttaattcagtattaggtcatctcctaaa
gcagtctgttcttgacttaaaacacaaagagtcccttgcatcctttcacg
gtagacaggaaactaaaatacttgtgaaagaaacttcccagtcctccaga
attgctcccctggcctcttaagctagaactgcagcttctcccatcagttt
gcagccctgggcagccatggctggatgggagccaactggcactccaggtg
ggatcagctcacagtttcccttcaggactccaggttcaagacagttctcc
aagaagacatgcactgccctgtgttcttccaggttcttgcctttattatc
tgtgaacagctgtaggatgtagtggggatatggcatcctgaaataagaag
gggcaagccagatgtccctgtttctgtctcagtgtcttttaaacatcgga
tgatagcccatattttagttcaatgacatgatgtaaaccgaagatagttg
gctttttgggttccctaaacaacaggtcatgggattagactatcccaccc
agaaaactttctgaactttagggaacagctcatagtgtattctggatact
gtcacaaaccaaaaagcatcatgtgtaacttccaattatggttcctaaaa
ccatatttaagattttagaagcaaaacaatttggtagattttatggatgt
aatattgcttttatgtcataatcagagaatatatcagctaccattaccga
catagcttaggtacttgggctaagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_26953386_26954351
seq2: B6Ng01-078L20.b_45_1000 (reverse)

seq1  TGTAAGTAACTCAAATAACTCACGAGTTTAAAAAAACAGACGTCATATTT  50
      ||||||| | ||||   |||||||||||   ||||||||||||||| |||
seq2  TGTAAGT-ATTCAA--TACTCACGAGTT---AAAAACAGACGTCAT-TTT  43

seq1  AGAAAATGCAAAAAGGAACTGACTAGACATTCTCTAAGGAGGACACGCAC  100
      || ||||||||||  | |||||||||||||  ||| ||||||||||||||
seq2  AG-AAATGCAAAA--GGACTGACTAGACATCTTCT-AGGAGGACACGCAC  89

seq1  ATGGACAGCAGGTGTGCCAACAATGCTCAGTATGGTTGATTATCAGGGAA  150
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATGGACAGCAGGTGTGCC-ACAATGCTCAGTATGGTTGATTATCAGGGAA  138

seq1  ATGTCACCTCATACACAGGAGAATGGCTTATCTCAAAAGGGAACTTGGGG  200
      ||||||||||||||||||||||||||||| |||||||||||| |||||||
seq2  ATGTCACCTCATACACAGGAGAATGGCTTTTCTCAAAAGGGACCTTGGGG  188

seq1  TAAAAAGT-GGAGAAATGGTAAGTCTTGTTTAAGTTTGGTGGAAATGAAA  249
      |||||||| ||||||||||||||||||||||||||| ||||||||| |||
seq2  TAAAAAGTGGGAGAAATGGTAAGTCTTGTTTAAGTTGGGTGGAAATAAAA  238

seq1  ATTAATGTAAGTTTCCTTTAAAAATTATCAGAATTATTGTATGATCTGGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGTAAGTTTCCTTTAAAAATTATCAGAATTATTGTATGATCTGGC  288

seq1  AATCCCATAGTGTTTATATATTCTGAAATAAATATGTAATCGTTTATGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCATAGTGTTTATATATTCTGAAATAAATATGTAATCGTTTATGCA  338

seq1  TAGACAAAAGCAGCCTCTATATGTAATCATTTATACATGGACAAAAGCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAAAAGCAGCCTCTATATGTAATCATTTATACATGGACAAAAGCAC  388

seq1  TCTCTAACCTTGATCAAAGAGGCTTCTTTTTACAATGAATGAGGGGGATG  449
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACCCTTGATCAAAGAGGCTTCTTTTTACAATGAATGAGGGGGATG  438

seq1  AAGAGAGACTGTGGCTGCCTCAGATATAGAAAATAAACAATACTGTGTGC  499
      |||||||||||||||| |||||||||||||||||||||||||||| ||||
seq2  AAGAGAGACTGTGGCTCCCTCAGATATAGAAAATAAACAATACTGGGTGC  488

seq1  CCATCCCTAAAATAATTTACAATACCCCCGCTATGGCTTAGGGAATGTTT  549
      |||||||||||||||||| |||| ||||||||||||||||||||||||||
seq2  CCATCCCTAAAATAATTTCCAATCCCCCCGCTATGGCTTAGGGAATGTTT  538

seq1  TTAGAAAAGGAAGTATGAAAGAGCTGAAGGATGGGGTGAAGGGCTACATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAAGGAAGTATGAAAGAGCTGAAGGATGGGGTGAAGGGCTACATA  588

seq1  ACACTGTTGTCTAGACTCAATACAATGAGTGCCATAACTTACTCACAGCA  649
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACACTGTTGTCTAGACTCAATACAATGAGTGCCATAACTTACTCCCAGCA  638

seq1  GCTAACCATAGTTACCTATAATGGGCTCACAAGAGTCTTGCCCTAAGTCA  699
      |||| |||||||| ||||||| |||||| |||||||||| ||||||||||
seq2  GCTACCCATAGTTCCCTATAAGGGGCTCCCAAGAGTCTTCCCCTAAGTCA  688

seq1  AGGAAGTAGGATGGGCTCCCACCTTTGTTTCTGAGCTACTGGCTACTGAT  749
      ||||||||||| |||||||| ||||||||| |||||||| ||||||||||
seq2  AGGAAGTAGGAGGGGCTCCCCCCTTTGTTTTTGAGCTACGGGCTACTGAT  738

seq1  ATATTCTGGAAGAC-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  798
      || || |||||| | |||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGGAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  788

seq1  TGCTCTCTATAGTTGTATGCTCGCTGCTGTGTCTACCAGGTTCCAACCCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCTATAGTTGTATGCTCGCTGCTGTGTCTACCAGGTTCCAACCCA  838

seq1  AAATTCCAACCCCTAGAAAAACTCAGTAGGTCACAAAGCAAAAGTAGTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCAACCCCTAGAAAAACTCAGTAGGTCACAAAGCAAAAGTAGTAT  888

seq1  ATGTAAATATAGAGAGATTTCTGGGAAGGAAGAGGGTACACAGGGGTGGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATATAGAGAGATTTCTGGGAAGGAAGAGGGTACACAGGGGTGGT  938

seq1  GTCGAGGTGGAGGAATTC  966
      ||||||||||||||||||
seq2  GTCGAGGTGGAGGAATTC  956

seq1: chr15_26778936_26780133
seq2: B6Ng01-078L20.g_71_1247

seq1  GAATTCTCACGGAATAGGTGCCGTTTCCTGACTCGTGTCATGAGACAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACGGAATAGGTGCCGTTTCCTGACTCGTGTCATGAGACAAGT  50

seq1  ACACAGGCAGAAGAAATCACCCATGGTTTCATGTTAAGATACAGAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGCAGAAGAAATCACCCATGGTTTCATGTTAAGATACAGAAAGAA  100

seq1  GTACACAGCCAGAAGCAGCCCCTTCCTATCCCTTACCTATGTATTGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACAGCCAGAAGCAGCCCCTTCCTATCCCTTACCTATGTATTGCATG  150

seq1  TAATAGATGCTGCCTGTTTCTGCTTTTACTGTTCCTAAAAAGATATGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGATGCTGCCTGTTTCTGCTTTTACTGTTCCTAAAAAGATATGTCC  200

seq1  CAGGAGCAATTAAGATGGATTTTCCATGTGATTCAGAGCACAGGCAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCAATTAAGATGGATTTTCCATGTGATTCAGAGCACAGGCAACAA  250

seq1  ATTGAGTTTTGTCCTTTAGACAATTTCACCTCAGGAGGCATGGATGCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTTTTGTCCTTTAGACAATTTCACCTCAGGAGGCATGGATGCTCC  300

seq1  AAGCACTGCAACACTGTGCTAAAGGTCCTTGAAAACCAGAATTTACTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTGCAACACTGTGCTAAAGGTCCTTGAAAACCAGAATTTACTAAC  350

seq1  TCCATGACAGGCTTGCTTTCTCCTTACTCCGCTGCTCCTAGTTTTCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGACAGGCTTGCTTTCTCCTTACTCCGCTGCTCCTAGTTTTCTCTC  400

seq1  TAAGTTATGACTGATACATCAGTTAATTCAGTATTAGGTCATCTCCTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTATGACTGATACATCAGTTAATTCAGTATTAGGTCATCTCCTAAA  450

seq1  GCAGTCTGTTCTTGACTTAAAACACAAAGAGTCCCTTGCATCCTTTCACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCTGTTCTTGACTTAAAACACAAAGAGTCCCTTGCATCCTTTCACG  500

seq1  GTAGACAGGAAACTAAAATACTTGTGAAAGAAACTTCCCAGTCCTCCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACAGGAAACTAAAATACTTGTGAAAGAAACTTCCCAGTCCTCCAGA  550

seq1  ATTGCTCCCCTGGCCTCTTAAGCTAGAACTGCAGCTTCTCCCATCAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCCCCTGGCCTCTTAAGCTAGAACTGCAGCTTCTCCCATCAGTTT  600

seq1  GCAGCCCTGGGCAGCCATGGCTGGATGGGAGCCAACTGGCACTCCAGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCTGGGCAGCCATGGCTGGATGGGAGCCAACTGGCACTCCAGGTG  650

seq1  GGATCAGCTCACAGTTTCCCTTCAGGACTCCAGGTTCAAGACAGTTCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGCTCACAGTTTCCCTTCAGGACTCCAGGTTCAAGACAGTTCTCC  700

seq1  AAGAAGACATGCACTGCCCTGTGTTCTTCCAGGTTCTTGCCTTTATTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACATGCACTGCCCTGTGTTCTTCCAGGTTCTTGCCTTTATTATC  750

seq1  TGTGAACAGCTGTAGGATGTAGTGGGGATATGGCATCCTGAAATAAGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACAGCTGTAGGATGTAGTGGGGATATGGCATCCTGAAATAAGAAG  800

seq1  GGGCAAGCCAGATGTCCCTGTTTCTGTCTCAGTGTCTTTTAAACATCGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGCCAGATGTCCCTGTTTCTGTCTCAGTGTCTTTTAAACATCGGA  850

seq1  TGATAGCCCATATTTTAGTTCAATGACATGATGTAAACCGAAGATAGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGCCCATATTTTAGTTCAATGACATGATGTAAACCGAAGATAGTTG  900

seq1  GCTTTTTGGGTTCCCTAAACAACAAGGTCAATGGGATTAGACTATCCAAC  950
      ||||||||||||||||||||||| ||||| ||||||||||||||||| ||
seq2  GCTTTTTGGGTTCCCTAAACAAC-AGGTC-ATGGGATTAGACTATCCCAC  948

seq1  CCAGAAAAACTTTCTGAACTTTAGGGAAACAGCTCATAGTGTATTCTGGA  1000
      |||| ||||||||||||||||||||| |||||||||||||||||||||| 
seq2  CCAG-AAAACTTTCTGAACTTTAGGG-AACAGCTCATAGTGTATTCTGG-  995

seq1  ATACTGTCACAAACCAAAAAAGCATCATGTGTAACTCCAAATAATGGTTT  1050
      ||||||||||||||| |||||||||||||||||||| | ||| |||||| 
seq2  ATACTGTCACAAACC-AAAAAGCATCATGTGTAACTTCCAATTATGGTTC  1044

seq1  CTAAAAACCATATTTTAAGACTTTAGAAAGCAAAACAAATTTTGGTAGAT  1100
      || ||||||||| ||||||| ||||| |||||||||||  ||||||||||
seq2  CT-AAAACCATA-TTTAAGATTTTAG-AAGCAAAACAA--TTTGGTAGAT  1089

seq1  TTTATTGAATGTAATATTGCTTTTATGTCATAATCAAGAGATATA-ATCA  1149
      |||| || ||||||||||||||||||||||||||| ||||| ||| ||| 
seq2  TTTA-TGGATGTAATATTGCTTTTATGTCATAATC-AGAGA-ATATATC-  1135

seq1  AGCTAACCTATCACAGCAATAGCTTAGGTTACCTTTTGGTGCTAAGTTT  1198
      |||||  | || || |  |||||||||| |||   |||| |||||||||
seq2  AGCTA--CCATTACCGACATAGCTTAGG-TAC---TTGG-GCTAAGTTT  1177