BAC Information

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BAC

Clone NameB6Ng01-080L18
Chromosome15 (Build37)
Map Location 73,255,979 - 73,428,219
singlet/doubletdoublet
Overlap geneLOC100040929, Dennd3, Slc45a4
Upstream geneKcnk9, 1810044A24Rik, LOC665621, Peg13, LOC100041120, Chrac1, Eif2c2, Ptk2, LOC666053
Downstream geneGpr20, LOC100040946, pPtp4a3, Gm628, LOC100041273, EG625276, LOC100040966, EG666113, LOC100041307, LOC100040984, Bai1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080L18.bB6Ng01-080L18.g
ACCDH895789DH895790
length9151,067
definitionDH895789|Mus musculus domesticus DNA, BAC clone: B6Ng01-080L18, 5' end.DH895790|Mus musculus domesticus DNA, BAC clone: B6Ng01-080L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,427,310 - 73,428,219)(73,255,979 - 73,257,061)
sequence
gaattctgtaggctgttgttcttttgtcagattcttactaagcgcctgcc
tgtttgtgctgggcggcgtgcctggcgtggaagtgacatggcagcccaaa
gcctggggctggccaggacacctgggcatgtcacctgaactgctactttg
cagagaagaaaacttgtaagtcaacatggctgcagttgggttgaggcaga
ggttgtgggctttgccctggatgccctctgcctggatggagtcttccctg
tcatgtctcagagacagaattgggaacaatagggttatattgatggaggt
tccctggcccaagtacaggaggaaagacacaataggcgatgtctctgagg
atcactgagtgctgagcgaggagaagtgaaggtgaaggctacgtagtgac
cagacggggttagtgagccaggagcagggctggaggatgctgtgattcag
ggcctcgatgcctcgcggagatgtgttccagacccccgaactgcactgtg
cgtgaggctggtgatgaggcagggtggtttgagaagcatttgctaaagtt
acagtgtcccttgtgtttgagaacagagcgataggacatagaacatacat
agcaggttaatgaaggcaaaaagttaatcagttgctgcaggaaatggcca
ttttaaaactttatgatgaaagccagaagtgagttaaatgttaacaaaat
gctacaaatatatgttgaaaagatagactaaaggtatcagccacccagag
accccatcgaggcccacaggtgctgccctgtgtgcccaggtgttagtcca
gcacagcgagggagtgtgcgtgtcggggtggcacactgtttgtcatggga
gaagtgggctttttaaacaaagtccagtcagtgtggcctcttaaactgct
gagccatcttctcca
gaattccaggacagccaaggctatacagagaatccctgtctcaaaaaaaa
aaaaaaaaccaaacaaacaaaaaaaaagaaataatattgccatgggaagc
aaagagctattacaaaacagcagagtgtctgctgtgtcagtgtggctgac
agatgggagagtagtatccagaaggctgtcctcatatatcctataatagc
ctcataaccctgcgggtgaccacctgttatcgatatccccacttcatgga
tgtgaaagctgtgtctcaggataaaaagaatgagtcaggtaacaaggcaa
aaattcaaggctgcttccttccaaccatatagtctctgcgcctgcttttc
tctctctgggtaatcagccacactccagccacccgcactctcgctcctag
agcagcctactgcactcaaaccccttgcaagaaaacaaaacagccagccc
aacttggcttctctcttcctgcactacatcagatgggccagtacttccct
ggcgtgggaagtcttcaggaagggcttcctgtattccaacagcgcagctg
cacaatcccccaagcaattccacttgaaatgcccatcctcccccaactgc
ccagagcttcctcctaggagagctctctcacagtgaagaagcagaaacgg
acatttaacagtcaggcgaggcagtgacacacactctggagacagaagca
ggtggatctctgagtttgaggccagcctgatctacacagtgagttccaga
acagcgagggctattacacagtaaaactctgtctcaagggaggacactta
gatagacactgagcagcctgcatttttgcccaaagatgctggaatgagag
acagtgaaaacgaagatcagatgtttggatcacagtttggtctagcaatg
acctgtagcagggaggatggcccttatagtgacaaactagggaaagagca
gagcaagaggactcagcagacccggattgcagcccgacatctcatgtgac
aatcatggccctgaacagctgaccacctctctgcttactttctcttttaa
tggggaggtgggagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_73427310_73428219
seq2: B6Ng01-080L18.b_47_961 (reverse)

seq1  TGGAG-AGATGGCTCAGCAG-TTAAGAGGCCACACTGACTGGACTTTGTT  48
      ||||| |||||||||||||| |||||||||||||||||||||||||||||
seq2  TGGAGAAGATGGCTCAGCAGTTTAAGAGGCCACACTGACTGGACTTTGTT  50

seq1  TAAAAAGCCCACTTCTCCCATGAC-AACAGTGTGCCACCCCGACACGCAC  97
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAAAAAGCCCACTTCTCCCATGACAAACAGTGTGCCACCCCGACACGCAC  100

seq1  ACTCCCTCGCTGTGCTGGACTAACACCT-GGCACACAGGGCAGCACCTGT  146
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACTCCCTCGCTGTGCTGGACTAACACCTGGGCACACAGGGCAGCACCTGT  150

seq1  GGGCCTCGATGGGGTCTCTGGGTGGCTGATACCTTTAGTCTATCTTTTCA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCGATGGGGTCTCTGGGTGGCTGATACCTTTAGTCTATCTTTTCA  200

seq1  ACATATATTTGTAGCATTTTGTTAACATTTAACTCACTTCTGGCTTTCAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATTTGTAGCATTTTGTTAACATTTAACTCACTTCTGGCTTTCAT  250

seq1  CATAAAGTTTT-AAATGGCCATTTCCTGCAGCAACTGATTAACTTTTTGC  295
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGTTTTAAAATGGCCATTTCCTGCAGCAACTGATTAACTTTTTGC  300

seq1  CTTCATTAACCTGCTATGTATGTTCTATGTCCTATCGCTCTGTTCTCAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTAACCTGCTATGTATGTTCTATGTCCTATCGCTCTGTTCTCAAA  350

seq1  CACAAGGGACACTGTAACTTTAGCAAATGCTTCTCAAACCACCCTGCCTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGGACACTGTAACTTTAGCAAATGCTTCTCAAACCACCCTGCCTC  400

seq1  ATCACCAGCCTCACGCACAGTGCAGTTCGGGGGTCTGGAACACATCTCCG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCAGCCTCACGCACAGTGCAGTTCGGGGGTCTGGAACACATCTCCG  450

seq1  CGAGGCATCGAGGCCCTGAATCACAGCATCCTCCAGCCCTGCTCCTGGCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCATCGAGGCCCTGAATCACAGCATCCTCCAGCCCTGCTCCTGGCT  500

seq1  CACTAACCCCGTCTGGTCACTACGTAGCCTTCACCTTCACTTCTCCTCGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAACCCCGTCTGGTCACTACGTAGCCTTCACCTTCACTTCTCCTCGC  550

seq1  TCAGCACTCAGTGATCCTCAGAGACATCGCCTATTGTGTCTTTCCTCCTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACTCAGTGATCCTCAGAGACATCGCCTATTGTGTCTTTCCTCCTG  600

seq1  TACTTGGGCCAGGGAACCTCCATCAATATAACCCTATTGTTCCCAATTCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGGCCAGGGAACCTCCATCAATATAACCCTATTGTTCCCAATTCT  650

seq1  GTCTCTGAGACATGACAGGGAAGACTCCATCCAGGCAGAGGGCATCCAGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGAGACATGACAGGGAAGACTCCATCCAGGCAGAGGGCATCCAGG  700

seq1  GCAAAGCCCACAACCTCTGCCTCAACCCAACTGCAGCCATGTTGACTTAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCCCACAACCTCTGCCTCAACCCAACTGCAGCCATGTTGACTTAC  750

seq1  AAGTTTTCTTCTCTGCAAAGTAGCAGTTCAGGTGACATGCCCAGGTGTCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTCTTCTCTGCAAAGTAGCAGTTCAGGTGACATGCCCAGGTGTCC  800

seq1  TGGCCAGCCCCAGGCTTTGGGCTGCCATGTCACTTCCACGCCAGGCACGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGCCCCAGGCTTTGGGCTGCCATGTCACTTCCACGCCAGGCACGC  850

seq1  CGCCCAGCACAAACAGGCAGGCGCTTAGTAAGAATCTGACAAAAGAACAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCAGCACAAACAGGCAGGCGCTTAGTAAGAATCTGACAAAAGAACAA  900

seq1  CAGCCTACAGAATTC  910
      |||||||||||||||
seq2  CAGCCTACAGAATTC  915

seq1: chr15_73255979_73257061
seq2: B6Ng01-080L18.g_69_1135

seq1  GAATTCCAGGACAGCCAAGGCTATACAGAGAATCCCTGTCTCAAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAAGGCTATACAGAGAATCCCTGTCTCAAAAAAAA  50

seq1  AAAAAAAACCAAACAAACAAAAAAAAAGAAATAATATTGCCATGGGAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACCAAACAAACAAAAAAAAAGAAATAATATTGCCATGGGAAGC  100

seq1  AAAGAGCTATTACAAAACAGCAGAGTGTCTGCTGTGTCAGTGTGGCTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCTATTACAAAACAGCAGAGTGTCTGCTGTGTCAGTGTGGCTGAC  150

seq1  AGATGGGAGAGTAGTATCCAGAAGGCTGTCCTCATATATCCTATAATAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGAGAGTAGTATCCAGAAGGCTGTCCTCATATATCCTATAATAGC  200

seq1  CTCATAACCCTGCGGGTGACCACCTGTTATCGATATCCCCACTTCATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAACCCTGCGGGTGACCACCTGTTATCGATATCCCCACTTCATGGA  250

seq1  TGTGAAAGCTGTGTCTCAGGATAAAAAGAATGAGTCAGGTAACAAGGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAGCTGTGTCTCAGGATAAAAAGAATGAGTCAGGTAACAAGGCAA  300

seq1  AAATTCAAGGCTGCTTCCTTCCAACCATATAGTCTCTGCGCCTGCTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAAGGCTGCTTCCTTCCAACCATATAGTCTCTGCGCCTGCTTTTC  350

seq1  TCTCTCTGGGTAATCAGCCACACTCCAGCCACCCGCACTCTCGCTCCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGGGTAATCAGCCACACTCCAGCCACCCGCACTCTCGCTCCTAG  400

seq1  AGCAGCCTACTGCACTCAAACCCCTTGCAAGAAAACAAAACAGCCAGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTACTGCACTCAAACCCCTTGCAAGAAAACAAAACAGCCAGCCC  450

seq1  AACTTGGCTTCTCTCTTCCTGCACTACATCAGATGGGCCAGTACTTCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGCTTCTCTCTTCCTGCACTACATCAGATGGGCCAGTACTTCCCT  500

seq1  GGCGTGGGAAGTCTTCAGGAAGGGCTTCCTGTATTCCAACAGCGCAGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGGGAAGTCTTCAGGAAGGGCTTCCTGTATTCCAACAGCGCAGCTG  550

seq1  CACAATCCCCCAAGCAATTCCACTTGAAATGCCCATCCTCCCCCAACTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATCCCCCAAGCAATTCCACTTGAAATGCCCATCCTCCCCCAACTGC  600

seq1  CCAGAGCTTCCTCCTAGGAGAGCTCTCTCACAGTGAAGAAGCAGAAACGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCTTCCTCCTAGGAGAGCTCTCTCACAGTGAAGAAGCAGAAACGG  650

seq1  ACATTTAACAGTCAGGCGAGGCAGTGACACACACTCTGGAGACAGAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAACAGTCAGGCGAGGCAGTGACACACACTCTGGAGACAGAAGCA  700

seq1  GGTGGATCTCTGAGTTTGAGGCCAGCCTGATCTACACAGTGAGTTCCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATCTCTGAGTTTGAGGCCAGCCTGATCTACACAGTGAGTTCCAGA  750

seq1  ACAGCGAGGGCTATTACACAGTAAAACTCTGTCTCAAGGGAGGACACTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGAGGGCTATTACACAGTAAAACTCTGTCTCAAGGGAGGACACTTA  800

seq1  GATAGACACTGAGCAGCCTGCATTTTTGCCCAAAGATGCTGGAATGAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGACACTGAGCAGCCTGCATTTTTGCCCAAAGATGCTGGAATGAGAG  850

seq1  ACAGTGAAAAACGAAGATCAGATG-TTGGATCACAGTTTGGTCTAGCAAT  899
      |||||| ||||||||||||||||| |||||||||||||||||||||||||
seq2  ACAGTG-AAAACGAAGATCAGATGTTTGGATCACAGTTTGGTCTAGCAAT  899

seq1  GACCTGTAGCAGGGGAGGATGGCCCTTATAGTGACAAACTAGGGAAAAGA  949
      ||||||||||| |||||||||||||||||||||||||||||||| |||||
seq2  GACCTGTAGCA-GGGAGGATGGCCCTTATAGTGACAAACTAGGG-AAAGA  947

seq1  GCAGGAAGCAAGGAGGACCTCAGCAGACCCGGATTGCAGCCCGACCATCC  999
      ||||  ||||| ||||| |||||||||||||||||||||||||| ||| |
seq2  GCAG--AGCAA-GAGGA-CTCAGCAGACCCGGATTGCAGCCCGA-CAT-C  991

seq1  TCATGTGACAATCCAATGGCCCTGAACAAGCTGACCACCCTCTCTGCTTA  1049
      |||||||||||||  |||||||||||| ||||||||| ||||||||||||
seq2  TCATGTGACAATC--ATGGCCCTGAAC-AGCTGACCA-CCTCTCTGCTTA  1037

seq1  CTTTCTCCTCTTTAAAATGGGGAGGTTGGAGAAG  1083
      |||||||    ||  ||||||||||| |||||||
seq2  CTTTCTC----TTTTAATGGGGAGGTGGGAGAAG  1067