BAC Information

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BAC

Clone NameB6Ng01-080O07
Chromosome15 (Build37)
Map Location 87,450,700 - 87,596,335
singlet/doubletdoublet
Overlap geneAW049604
Upstream geneLOC100042309
Downstream geneLOC100042329, LOC100042340, Zdhhc25, Brd1, Zbed4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080O07.bB6Ng01-080O07.g
ACCDH895904DH895905
length1,0771,017
definitionDH895904|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O07, 5' end.DH895905|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,595,238 - 87,596,335)(87,450,700 - 87,451,717)
sequence
gaattcttggcctcttcatcttccctctgtgtcttcacgatcagtcgata
cttcttcattcctcaagctctagaattctgaggtcaagggatgtctttat
tgccccacccttttgagtttcctgaggtgagcatctgggggtcatacaat
ctcttcatctataaatacctctggctcacagtcatttaaaggtatatctt
tatccgatatataatttttaagttgagaagtgttgatttttctccctatc
agaactttcaaggtatgctgttgctctctgggcatggaatgtgaggacca
taggtaccatatacacagccatcccctgggtcagcagattgatcgtggat
agacttagctggtatctcataaccttggctggctggacctgggggtggga
ggttttctcctctgttccttccttctcttgtagcattgtgcagttggggc
ctcagggttgtctgtttgatggtatcatagtgggcagacttctgcagcca
aatgttcctacctcatagcagcagcaaagtcacagctatcgatttgccag
aagtcttgggacgaaactcagaggcagtgtggtttgcacagggaagtgtg
gactgatgctcttggctctaacaatccaacaagccagagcctctttggag
agtgcatgaacttgcatctgtgggcatgctttctcctagtgggcttgatt
agttgcatgctgttagcatccaggatggtgcaaccatgctacactgatcc
acaactaatgcttagttgcctcgtgacacatgctccatgggaccttccag
aaaatacaggttgtacataaactaactagcctacaatgcacataggagaa
gcccttcttcacccagagcctcaatgtggacagttgaaccccctcccatg
aaccagaaccaagtcttagggcatagcataaattccctataatgtttgta
tagactttcctggagactcacacatcatcgtcatatcatatctttttctg
cagtattctgcttctaccacacactaacatgtgattattagctctgactg
ctatcgtttgtgatgcgacatacttta
gaattcttttcctgagatttgtctgtgagctggttttaagaattgtgtag
agacagagttgttccctggaccgttccgtccatgtagcttcccacagagg
agaccagtgactagaaacacggagagaaagagagagacgtggtatttcac
tgtaaagatcttgcctgttgatggaaattcttcccaatttcagggcccag
tgcttcttcgtgcatcttctgcaccacgcctctacacctcgaaagtctcc
tggctatctgttcttccatgtgattcctttctctgctgaagcctctgtca
gctctctgagcaggatgtgggtgggaaggtcccttcagctgccctctgtg
gacagaggagctggccagcatctttcgtagtgtcttttcccaccagcctg
gaaggacactgctcttctctggagggaaaggcagcattgctaaacaaaag
cccattgtcgcttctctgattccatgggtcagaagtctacttggttttac
aggctttcagggctgcttggctctgggtagcaagcccttccgttttcgta
cctcttcctcctctttgatcttttctgcctccagactttctaataggaga
cttggacacctgagatcttctccccacattgtatcacccctaggcctttc
ctgtgttccccttctgtgggctccaccctgcaagtttgctgactactctc
tagacctgggcctttttcaccacataaacacagccctgcatcttaagacc
tgaacactgtgtttcatcttaagcctattttgtctcctggttttgtgtgg
tcactatagtgtttccttattgtttttagcaagatgatggaattttagga
ttattatagttcctttcttcatcccaaaatcatttctgccttctcagaat
tagctgtggaaagtataatttcctgctccctttctgttgctgggcttttg
tagatacctgtgatcctgttgcccgctctgttctggggagggaagcttgg
aggctccagccagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_87595238_87596335
seq2: B6Ng01-080O07.b_46_1122 (reverse)

seq1  TAAAGTATTTGTCGCCACTCTACAAACAGATTAGCAGTCTAGAGCTAATA  50
      |||||||  ||||||  |   |||||| || |||||||| ||||||||||
seq2  TAAAGTA--TGTCGCATC---ACAAAC-GA-TAGCAGTC-AGAGCTAATA  42

seq1  ATCACATGTTTATGTGTGTGTGTTAGAAAGCAGAATTACTGCAGAAAAAA  100
      ||||||||||     ||||||| ||| |||||||| |||||||| |||||
seq2  ATCACATGTT----AGTGTGTGGTAG-AAGCAGAA-TACTGCAG-AAAAA  85

seq1  GATATAGATAATGACGATGATGTGTGAGATCTCCAGGAAAGTCTATACAA  150
      ||||| ||| |||||||||||||||||| ||||||||||||||||||| |
seq2  GATAT-GAT-ATGACGATGATGTGTGAG-TCTCCAGGAAAGTCTATAC-A  131

seq1  AACATTATAGGGAATCTTATGCTATGCCCTAAGACCTTGGTTCTGGTTCA  200
      ||||||||||||||| |||||||||||||||||| |||||||||||||||
seq2  AACATTATAGGGAAT-TTATGCTATGCCCTAAGA-CTTGGTTCTGGTTCA  179

seq1  TGGGAGGGGGTTCAACTGTCCACCTTGAGGCTCTGGGTGAAGAAGGGCTT  250
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGGGAGGGGGTTCAACTGTCCACATTGAGGCTCTGGGTGAAGAAGGGCTT  229

seq1  CTCCTATGTGCATTGTAGGCTAGTTAGTTTATGTACAACCTGTATTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTATGTGCATTGTAGGCTAGTTAGTTTATGTACAACCTGTATTTTCT  279

seq1  GGAAGGTCCCATGGAGCATGTGTCACGAGGCAACTAAGCATTAGTTGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTCCCATGGAGCATGTGTCACGAGGCAACTAAGCATTAGTTGTGG  329

seq1  ATCAGTGTAGCATGGTTGCACCATCCTGGATGCTAACAGCATGCAACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGTAGCATGGTTGCACCATCCTGGATGCTAACAGCATGCAACTAA  379

seq1  TCAAGCCCACTAGGAGAAAGCATGCCCACAGATGCAAGTTCATGCACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCCACTAGGAGAAAGCATGCCCACAGATGCAAGTTCATGCACTCT  429

seq1  CCAAAGAGGCTCTGGCTTGTTGGATTGTTAGAGCCAAGAGCATCAGTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAGGCTCTGGCTTGTTGGATTGTTAGAGCCAAGAGCATCAGTCCA  479

seq1  CACTTCCCTGTGCAAACCACACTGCCTCTGAGTTTCGTCCCAAGACTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCCTGTGCAAACCACACTGCCTCTGAGTTTCGTCCCAAGACTTCT  529

seq1  GGCAAATCGATAGCTGTGACTTTGCTGCTGCTATGAGGTAGGAACATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATCGATAGCTGTGACTTTGCTGCTGCTATGAGGTAGGAACATTTG  579

seq1  GCTGCAGAAGTCTGCCCACTATGATACCATCAAACAGACAACCCTGAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGAAGTCTGCCCACTATGATACCATCAAACAGACAACCCTGAGGC  629

seq1  CCCAACTGCACAATGCTACAAGAGAAGGAAGGAACAGAGGAGAAAACCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTGCACAATGCTACAAGAGAAGGAAGGAACAGAGGAGAAAACCTC  679

seq1  CCACCCCCAGGTCCAGCCAGCCAAGGTTATGAGATACCAGCTAAGTCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCCAGGTCCAGCCAGCCAAGGTTATGAGATACCAGCTAAGTCTAT  729

seq1  CCACGATCAATCTGCTGACCCAGGGGATGGCTGTGTATATGGTACCTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGATCAATCTGCTGACCCAGGGGATGGCTGTGTATATGGTACCTATG  779

seq1  GTCCTCACATTCCATGCCCAGAGAGCAACAGCATACCTTGAAAGTTCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCACATTCCATGCCCAGAGAGCAACAGCATACCTTGAAAGTTCTGA  829

seq1  TAGGGAGAAAAATCAACACTTCTCAACTTAAAAATTATATATCGGATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGAAAAATCAACACTTCTCAACTTAAAAATTATATATCGGATAAA  879

seq1  GATATACCTTTAAATGACTGTGAGCCAGAGGTATTTATAGATGAAGAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACCTTTAAATGACTGTGAGCCAGAGGTATTTATAGATGAAGAGAT  929

seq1  TGTATGACCCCCAGATGCTCACCTCAGGAAACTCAAAAGGGTGGGGCAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGACCCCCAGATGCTCACCTCAGGAAACTCAAAAGGGTGGGGCAAT  979

seq1  AAAGACATCCCTTGACCTCAGAATTCTAGAGCTTGAGGAATGAAGAAGTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACATCCCTTGACCTCAGAATTCTAGAGCTTGAGGAATGAAGAAGTA  1029

seq1  TCGACTGATCGTGAAGACACAGAGGGAAGATGAAGAGGCCAAGAATTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACTGATCGTGAAGACACAGAGGGAAGATGAAGAGGCCAAGAATTC  1077

seq1: chr15_87450700_87451717
seq2: B6Ng01-080O07.g_73_1089

seq1  GAATTCTTTTCCTGAGATTTGTCTGTGAGCTGGTTTTAAGAATTGTGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCCTGAGATTTGTCTGTGAGCTGGTTTTAAGAATTGTGTAG  50

seq1  AGACAGAGTTGTTCCCTGGACCGTTCCGTCCATGTAGCTTCCCACAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGTTGTTCCCTGGACCGTTCCGTCCATGTAGCTTCCCACAGAGG  100

seq1  AGACCAGTGACTAGAAACACGGAGAGAAAGAGAGAGACGTGGTATTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGTGACTAGAAACACGGAGAGAAAGAGAGAGACGTGGTATTTCAC  150

seq1  TGTAAAGATCTTGCCTGTTGATGGAAATTCTTCCCAATTTCAGGGCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGATCTTGCCTGTTGATGGAAATTCTTCCCAATTTCAGGGCCCAG  200

seq1  TGCTTCTTCGTGCATCTTCTGCACCACGCCTCTACACCTCGAAAGTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTCGTGCATCTTCTGCACCACGCCTCTACACCTCGAAAGTCTCC  250

seq1  TGGCTATCTGTTCTTCCATGTGATTCCTTTCTCTGCTGAAGCCTCTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATCTGTTCTTCCATGTGATTCCTTTCTCTGCTGAAGCCTCTGTCA  300

seq1  GCTCTCTGAGCAGGATGTGGGTGGGAAGGTCCCTTCAGCTGCCCTCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTGAGCAGGATGTGGGTGGGAAGGTCCCTTCAGCTGCCCTCTGTG  350

seq1  GACAGAGGAGCTGGCCAGCATCTTTCGTAGTGTCTTTTCCCACCAGCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGAGCTGGCCAGCATCTTTCGTAGTGTCTTTTCCCACCAGCCTG  400

seq1  GAAGGACACTGCTCTTCTCTGGAGGGAAAGGCAGCATTGCTAAACAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACACTGCTCTTCTCTGGAGGGAAAGGCAGCATTGCTAAACAAAAG  450

seq1  CCCATTGTCGCTTCTCTGATTCCATGGGTCAGAAGTCTACTTGGTTTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGTCGCTTCTCTGATTCCATGGGTCAGAAGTCTACTTGGTTTTAC  500

seq1  AGGCTTTCAGGGCTGCTTGGCTCTGGGTAGCAAGCCCTTCCGTTTTCGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTCAGGGCTGCTTGGCTCTGGGTAGCAAGCCCTTCCGTTTTCGTA  550

seq1  CCTCTTCCTCCTCTTTGATCTTTTCTGCCTCCAGACTTTCTAATAGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCCTCCTCTTTGATCTTTTCTGCCTCCAGACTTTCTAATAGGAGA  600

seq1  CTTGGACACCTGAGATCTTCTCCCCACATTGTATCACCCCTAGGCCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGACACCTGAGATCTTCTCCCCACATTGTATCACCCCTAGGCCTTTC  650

seq1  CTGTGTTCCCCTTCTGTGGGCTCCACCCTGCAAGTTTGCTGACTACTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTCCCCTTCTGTGGGCTCCACCCTGCAAGTTTGCTGACTACTCTC  700

seq1  TAGACCT-GGCCTTTTTCACCACAT-AACACAGCCCTGCATCTTAAGACC  748
      ||||||| ||||||||||||||||| ||||||||||||||||||||||||
seq2  TAGACCTGGGCCTTTTTCACCACATAAACACAGCCCTGCATCTTAAGACC  750

seq1  TGAACACTGTG-TTCATCTTAAGCCTATTTTGTCTCCTGGTTTTGTGTGG  797
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGAACACTGTGTTTCATCTTAAGCCTATTTTGTCTCCTGGTTTTGTGTGG  800

seq1  TCACTATAGTGTTTCCTTATATGTTTTAGCAAGATGATGGAA-TTTAGGA  846
      ||||||||||||||||||||   ||||||||||||||||||| |||||||
seq2  TCACTATAGTGTTTCCTTATTGTTTTTAGCAAGATGATGGAATTTTAGGA  850

seq1  TTATTATAGTTCCTTTCTTCATCCCCAAATCATTTCTGCCTTCTCAGAAT  896
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTATTATAGTTCCTTTCTTCATCCCAAAATCATTTCTGCCTTCTCAGAAT  900

seq1  TAGCTGTGGAATGTATATTTTCTGCCTCCCTTTTCTG-TGCTTGGCTTTT  945
      ||||||||||| ||||| ||||   ||||| |||||| |||| ||| |||
seq2  TAGCTGTGGAAAGTATAATTTCCTGCTCCC-TTTCTGTTGCTGGGC-TTT  948

seq1  TGTAGATACCTGGTGATCCTGTTTGTCCGGCTCTGTTACATGGGAGGGAA  995
      ||||||||||| |||||||||||   || |||||||| |  |||||||||
seq2  TGTAGATACCT-GTGATCCTGTT--GCCCGCTCTGTT-CTGGGGAGGGAA  994

seq1  GC-TGGAGGTCTACAGCCAGAGAG  1018
      || |||||| || |||||||||||
seq2  GCTTGGAGG-CTCCAGCCAGAGAG  1017