BAC Information

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BAC

Clone NameB6Ng01-081O18
Chromosome15 (Build37)
Map Location 25,336,095 - 25,337,203
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666999, LOC100040492, LOC100040499, LOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1
Downstream geneEG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622, AK162044
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081O18.bB6Ng01-081O18.g
ACCDH896630DH896631
length1,1091,174
definitionDH896630|Mus musculus domesticus DNA, BAC clone: B6Ng01-081O18, 5' end.DH896631|Mus musculus domesticus DNA, BAC clone: B6Ng01-081O18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tggcccccttggagcagagggttggaagtttcagtacctaaatactgacc
ttggaactcttagggaagtctggtggtttgcacaaagtgctgtgagctgg
ttcatgactaaggggaaggcaggttatttcccagtatggatgacgtttct
gctgtacaatccaacagagtaaggcagaagaaaaaaatcaaaatgtccaa
ttgggttattcatattcatggcctgaaacttataacaaccaccgccacta
ccataccatttctttctctgtgtcacccttgcttgacagttcggctggtc
tcctgcacctctgcctgttcctctctatggggactctttcacctttatta
catcacacttgcccacagtgggagctccctagaaacgacctgttaatcct
ttatccccagtgtcatccaccttggctctatttcttacatcctatgcatg
tgatttccttttattccaaataatatatggcatgcattaaaatgacccaa
aagaccagacttgatattggatcttgcctttcctcctaaagtgaacgatg
gttgcagaattaaggggttgtagatagatggtacacatttgaggagaaaa
ataaaaaagccagttttagactaattttgagtcaaaatgacctaaaagta
tttggaggtctctggagacatccggtgtgtgcacttttgtagagaggtgt
cagctgcccagagtgtttgtgcccattgctggagttgtctggtttggaag
tctcaggaagcaggagatctaattttttttgtttagaattaccagataca
ctatttgagctgatttggacatttgaaagggctgtggtattctgattcgt
ctgttaaatatggagtttaattctggaatgtttggaattggttttagcaa
gttttgtttacatgtactcagattgggacaaactattaagttttgcttta
ggttgaaagacttttacatcaccatttaaaacagtcctagacttttgtgt
ggaccgggagcctttgaagggttgtggtttttttgctttttgttttggtt
ttgtttggtggtttgtctttcccgggaactgccagtttgtagtggacttc
acggatttc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacgtagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattggaaa
caaaacacccatggaaagagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctttttgtgagactatgcccggagcctagcaa
acacagaagtggatgctcacagtcagctaatggatggatcacagggctcc
catggaggaggttagaaaagtagccaagagctaaagggatctgcaaccct
attaggttgacaaccattatgactacagtacccgagctcttgacttctag
ctgcctatgattcaaaagaatggcctagtcgcactactctgtaggagggc
attggaaacgcaaacttatctgccccagtacatggatgcccagtggctaa
aacgtgaatgtggtggtacggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25336095_25337203
seq2: B6Ng01-081O18.b_55_1163 (reverse)

seq1  GAAATCTGTGAAGTCACTTACAAACT-GCAGGTTTCTCTGGAAAAAACAA  49
      |||||| ||||||||   |||||||| ||||  ||| | || ||| ||||
seq2  GAAATCCGTGAAGTCCACTACAAACTGGCAG--TTC-CCGGGAAAGACAA  47

seq1  ACAAACAAACAAAAAACAAAAAACAAAAAGCAAAAAAA-CACAACTCCTC  98
      || | |||||||||     ||||||||||||||||||| |||||| | ||
seq2  ACCACCAAACAAAA---CCAAAACAAAAAGCAAAAAAACCACAACCCTTC  94

seq1  AAA-GCTCCCGGT-CACACAAAAGTCTA-GACTGTTTTAAATGTGAATGT  145
      ||| ||||||||| |||||||||||||| ||||||||||||||   ||||
seq2  AAAGGCTCCCGGTCCACACAAAAGTCTAGGACTGTTTTAAATGGTGATGT  144

seq1  AAAAGTC-TTCTACCTAAAGCAAAACTTAATAGTTTGTCCCAATCTGAGT  194
      ||||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTTTCAACCTAAAGCAAAACTTAATAGTTTGTCCCAATCTGAGT  194

seq1  ACATGTAAACAAAACTTGCTAAAACCAATTCCAAACATTCCAGAATTAAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAAACAAAACTTGCTAAAACCAATTCCAAACATTCCAGAATTAAA  244

seq1  CTCCATATTTAACAGACGAATCAGAATACCACAGCCCTTTCAAATGTCCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATATTTAACAGACGAATCAGAATACCACAGCCCTTTCAAATGTCCA  294

seq1  AATCAGCTCAAATAGTGTATCTGGTAATTCTAAACAAAAAAAATTAGATC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGCTCAAATAGTGTATCTGGTAATTCTAAACAAAAAAAATTAGATC  344

seq1  TCCTGCTTCCTGAGACTTCCAAACCAGACAACTCCAGCAATGGGCACAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTTCCTGAGACTTCCAAACCAGACAACTCCAGCAATGGGCACAAA  394

seq1  CACTCTGGGCAGCTGACACCTCTCTACAAAAGTGCACACACCGGATGTCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGGGCAGCTGACACCTCTCTACAAAAGTGCACACACCGGATGTCT  444

seq1  CCAGAGACCTCCAAATACTTTTAGGTCATTTTGACTCAAAATTAGTCTAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGACCTCCAAATACTTTTAGGTCATTTTGACTCAAAATTAGTCTAA  494

seq1  AACTGGCTTTTTTATTTTTCTCCTCAAATGTGTACCATCTATCTACAACC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCTTTTTTATTTTTCTCCTCAAATGTGTACCATCTATCTACAACC  544

seq1  CCTTAATTCTGCAACCATCGTTCACTTTAGGAGGAAAGGCAAGATCCAAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATTCTGCAACCATCGTTCACTTTAGGAGGAAAGGCAAGATCCAAT  594

seq1  ATCAAGTCTGGTCTTTTGGGTCATTTTAATGCATGCCATATATTATTTGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTCTGGTCTTTTGGGTCATTTTAATGCATGCCATATATTATTTGG  644

seq1  AATAAAAGGAAATCACATGCATAGGATGTAAGAAATAGAGCCAAGGTGGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGGAAATCACATGCATAGGATGTAAGAAATAGAGCCAAGGTGGA  694

seq1  TGACACTGGGGATAAAGGATTAACAGGTCGTTTCTAGGGAGCTCCCACTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACTGGGGATAAAGGATTAACAGGTCGTTTCTAGGGAGCTCCCACTG  744

seq1  TGGGCAAGTGTGATGTAATAAAGGTGAAAGAGTCCCCATAGAGAGGAACA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAAGTGTGATGTAATAAAGGTGAAAGAGTCCCCATAGAGAGGAACA  794

seq1  GGCAGAGGTGCAGGAGACCAGCCGAACTGTCAAGCAAGGGTGACACAGAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGTGCAGGAGACCAGCCGAACTGTCAAGCAAGGGTGACACAGAG  844

seq1  AAAGAAATGGTATGGTAGTGGCGGTGGTTGTTATAAGTTTCAGGCCATGA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATGGTATGGTAGTGGCGGTGGTTGTTATAAGTTTCAGGCCATGA  894

seq1  ATATGAATAACCCAATTGGACATTTTGATTTTTTTCTTCTGCCTTACTCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAATAACCCAATTGGACATTTTGATTTTTTTCTTCTGCCTTACTCT  944

seq1  GTTGGATTGTACAGCAGAAACGTCATCCATACTGGGAAATAACCTGCCTT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGATTGTACAGCAGAAACGTCATCCATACTGGGAAATAACCTGCCTT  994

seq1  CCCCTTAGTCATGAACCAGCTCACAGCACTTTGTGCAAACCACCAGACTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTAGTCATGAACCAGCTCACAGCACTTTGTGCAAACCACCAGACTT  1044

seq1  CCCTAAGAGTTCCAAGGTCAGTATTTAGGTACTGAAACTTCCAACCCTCT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGAGTTCCAAGGTCAGTATTTAGGTACTGAAACTTCCAACCCTCT  1094

seq1  GCTCCAAGGGGGCCA  1109
      |||||||||||||||
seq2  GCTCCAAGGGGGCCA  1109