BAC Information

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BAC

Clone NameB6Ng01-085L15
Chromosome15 (Build37)
Map Location 42,610,730 - 42,611,864
singlet/doubletsinglet
Overlap genenone
Upstream geneOxr1, Abra, EG432946, LOC432947, LOC100039268, LOC100039197, Angpt1
Downstream geneRspo2, LOC675960, Eif3s6, Ttc35
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085L15.bB6Ng01-085L15.g
ACCDH899317DH899318
length1,1341,168
definitionDH899317|Mus musculus domesticus DNA, BAC clone: B6Ng01-085L15, 5' end.DH899318|Mus musculus domesticus DNA, BAC clone: B6Ng01-085L15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctactcgctaataagatggaataaacactgaagtgtgcaatgtgg
atgagccttagaaacaccagctgaactgaaataaaaggcattgggtatga
aaccctatgttctgtttgatttgattccaatgaactatctgaacagggcc
agtttatagaaccattgctttaggatagagcatgggccaggattgactag
aaacaggcatttgagaatttctagagagtgataaaaatgttctaaagctt
gattgtgcctatggttgcatgggcttataaatcttctaaaggtaagttgc
aattaaatgtaatttgactgtgcattataaagagtgaactttatagctta
ccagtttctaacagagaaagaaaatgctaatgttcatgatacaccaacag
ttaaaaatcatcttaaacttttattggtgaagaagggcgtgaccacatac
atcactcacacccttgtgtttactcttgtggttcttatccgttgaaatat
atcacagaacagtcttgtaggaaggcttattacaagctaatgttagtaaa
atatcgaagcattgccacaaagaaatacgttcccgttctttaaactgaaa
tacactttgaagtgatgggtctttgaggatcttctcccaaatgaggctta
catgctgcacagactacctgctacagattgagccatgaatgaagaagtaa
cataaagaaaacggaagtaatatgttttgttgttgtttttaattaaaggt
ataagaacatttagtccctatatttggtaaaggctcaaacctagcaaata
cctagaattactcatgttttaaaatgtaaacagaacagtatgtaggaaga
ttctaggcagcatgcttcagaaatctatatatagaaaacccctgcagctc
ttgagcagtgaggacattgctagttttagtttgttcactgaaactggtgg
ggacagtgccaatagtgaggctaacctccacagtgagtgtggacttcaaa
ggccagttagctcccaagcctcagcttttcctctattccattcactttga
agtgaggcagcaaaaggtgctggaaaccatattggtgtcggatacatcca
aattaagcttattatatagaaaccatgttggttt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagtttacagagacggagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcccagcata
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatggagagctagagaagtagccaaggagctaaaggatctgcacccttaa
ggtgaacaacattatgaactaacagtacccggagctcttgactctagctg
cataattaatcaaagatgcctagtcgccatcactgtaaagaagcatgaac
ttgcaacttatatgccagtgacggtaatacaaggccaaaaggggagtgtg
tggcacgagaatgtgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_42610730_42611864
seq2: B6Ng01-085L15.b_48_1181

seq1  GAATTCTACTCGCTAATAAGATGGAATAAACACTGAAGTGTGCAATGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTCGCTAATAAGATGGAATAAACACTGAAGTGTGCAATGTGG  50

seq1  ATGAGCCTTAGAAACACCAGCTGAACTGAAATAAAAGGCATTGGGTATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCTTAGAAACACCAGCTGAACTGAAATAAAAGGCATTGGGTATGA  100

seq1  AACCCTATGTTCTGTTTGATTTGATTCCAATGAACTATCTGAACAGGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTATGTTCTGTTTGATTTGATTCCAATGAACTATCTGAACAGGGCC  150

seq1  AGTTTATAGAACCATTGCTTTAGGATAGAGCATGGGCCAGGATTGACTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATAGAACCATTGCTTTAGGATAGAGCATGGGCCAGGATTGACTAG  200

seq1  AAACAGGCATTTGAGAATTTCTAGAGAGTGATAAAAATGTTCTAAAGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGCATTTGAGAATTTCTAGAGAGTGATAAAAATGTTCTAAAGCTT  250

seq1  GATTGTGCCTATGGTTGCATGGGCTTATAAATCTTCTAAAGGTAAGTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGCCTATGGTTGCATGGGCTTATAAATCTTCTAAAGGTAAGTTGC  300

seq1  AATTAAATGTAATTTGACTGTGCATTATAAAGAGTGAACTTTATAGCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATGTAATTTGACTGTGCATTATAAAGAGTGAACTTTATAGCTTA  350

seq1  CCAGTTTCTAACAGAGAAAGAAAATGCTAATGTTCATGATACACCAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTCTAACAGAGAAAGAAAATGCTAATGTTCATGATACACCAACAG  400

seq1  TTAAAAATCATCTTAAACTTTTATTGGTGAAGAAGGGCGTGACCACATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATCATCTTAAACTTTTATTGGTGAAGAAGGGCGTGACCACATAC  450

seq1  ATCACTCACACCCTTGTGTTTACTCTTGTGGTTCTTATCCGTTGAAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCACACCCTTGTGTTTACTCTTGTGGTTCTTATCCGTTGAAATAT  500

seq1  ATCACAGAACAGTCTTGTAGGAAGGCTTATTACAAGCTAATGTTAGTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGAACAGTCTTGTAGGAAGGCTTATTACAAGCTAATGTTAGTAAA  550

seq1  ATATCGAAGCATTGCCACAAAGAAATACGTTCCCGTTCTTTAAACTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCGAAGCATTGCCACAAAGAAATACGTTCCCGTTCTTTAAACTGAAA  600

seq1  TACACTTTGAAGTGATGGGTCTTTGAGGATCTTCTCCCAAATGAGGCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTTGAAGTGATGGGTCTTTGAGGATCTTCTCCCAAATGAGGCTTA  650

seq1  CATGCTGCACAGACTACCTGCTACAGATTGAGCCATGAATGAAGAAGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGCACAGACTACCTGCTACAGATTGAGCCATGAATGAAGAAGTAA  700

seq1  CATAAAGAAAACGGAAGTAATATGTTTTGTTGTTGTTTTTAATTAAAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGAAAACGGAAGTAATATGTTTTGTTGTTGTTTTTAATTAAAGGT  750

seq1  ATAAGAACATTTAGTCCCTATATTTGGTAAAGGCTCAAACCTAGCAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACATTTAGTCCCTATATTTGGTAAAGGCTCAAACCTAGCAAATA  800

seq1  CCTAGAATTACTCATGTTTTAAAATGTAAACAGAACAGTATGTAGGAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAATTACTCATGTTTTAAAATGTAAACAGAACAGTATGTAGGAAGA  850

seq1  TTCTAGGCAGCAGGCTTCAGAAATCTATATATAGAAAACCCCTGCAGCTC  900
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGCAGCATGCTTCAGAAATCTATATATAGAAAACCCCTGCAGCTC  900

seq1  TTGAGCAGTGAGGACATTGCTAGTTTTAGTTTGTTCACTGAAACTGGTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCAGTGAGGACATTGCTAGTTTTAGTTTGTTCACTGAAACTGGTGG  950

seq1  GGACAGTGCCAATAGTGAGGCTAACCTCCACAGTGAGTGTGGACTTCAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGTGCCAATAGTGAGGCTAACCTCCACAGTGAGTGTGGACTTCAAA  1000

seq1  GGCCAGGTAGCTCCCCAAGCCTCAGCTTGT-CTCTAATCCA-TCACTTTG  1048
      |||||| ||||| ||||||||||||||| | ||||| |||| ||||||| 
seq2  GGCCAGTTAGCT-CCCAAGCCTCAGCTTTTCCTCTATTCCATTCACTTT-  1048

seq1  GAAGTGAGGCAGCAGAGGGTGCTGGGACACATAATTGTGTCAGATACAAT  1098
      |||||||||||||| | |||||||| |  |||| | ||||| ||||| ||
seq2  GAAGTGAGGCAGCAAAAGGTGCTGGAAACCATATTGGTGTCGGATAC-AT  1097

seq1  CAAATTTAAGCTTAATTATAGA-AAACCATGTTGGTTT  1135
      | || |||||||| |||||| | |||||||||||||||
seq2  CCAAATTAAGCTT-ATTATATAGAAACCATGTTGGTTT  1134