BAC Information

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BAC

Clone NameB6Ng01-089F18
Chromosome15 (Build37)
Map Location 68,302,249 - 68,303,393
singlet/doubletsinglet
Overlap genenone
Upstream geneZfat1, LOC100041000
Downstream geneEG665945, EG633752, Khdrbs3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089F18.bB6Ng01-089F18.g
ACCDH901958DH901959
length1,148951
definitionDH901958|Mus musculus domesticus DNA, BAC clone: B6Ng01-089F18, 5' end.DH901959|Mus musculus domesticus DNA, BAC clone: B6Ng01-089F18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcttcctcccatcttgctctatgcatgtagaagcattggtga
gttatgcacagcctggcagactcatactatggactagttctgcgggatgc
tcttgaccatgggtacccatttcaggtggatgcttaactatgcccagcca
ccttaatatacttaaaattccttgaacctggaaaagcacttttgtctgaa
caccccactgaccttccaagcctaattctcagttagttccgccacttaga
taatcgatgaaaagaattcagatcaggaattctgttcttcctaccccaga
cccttggcctgcatctgttggctctttcctttcacttcatgtcatttcag
tgaatggatggtcccagatcaacctgaggaccaacttctggattgctgga
ctttactcttgtaccttgagttagtcggttattttataacaacatgctta
tatctcagtatcataccacaatttatcctcttgcctccattccttggatc
tgcttctggctccctcaccatttttcttttgactcctattctccgtgtcc
tccgcttcctacactaggtttgctaaatcttacctctcttcccactatgg
aatctgccccctcaggtcaccacctctctcctgatctggaggactaaggg
cctaattctctgctataactttgtttgtttgtttgtttttgttttttgtt
cttcaagacagggtttctctgtgtagccctggctgtcctggaactcactt
tgtagaccaggctggcttcgaactcagaaaatctgcctgcctctgcctcc
caagtgctgggttaaaggcgtgtgccaccatcgcctggcttctgctataa
cctttatttaatgtaccttgcacatgggtaatgactttgctcccagcccc
cagtgcatctaagctgtgtgtattagtgcttagtgtgctagcccatcctg
gggctcttctcacttgccttattcaccggcatccccttcccctgctctgg
gtctgagtcctttcacctcactgcttagctcagttctggattccattgtc
ctccttacccgcaccatcttctgagctgaccccataccctgccatggctt
ataccggtgttcaaaatgacactccaatttaactgtgagcctctgccg

gaattctacctgaggaataccgaatggttgagaagcacctgaaaaaatat
tcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagataaaaaattcaggtgacagca
ggtgctggcaaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaagcttgtacaaccactcagataagtctggcggttcctcagaaa
attggatatagtactaccagaggatcctgcaatacctctcctaggaatat
atccagaagatgttccaaccattaagaaggacacatgctccactatgttc
ataacagccttatttattatagccagaagctggaaagaacccagatgccc
ctcaacagaggaatagatacagaaaatgtggtacatttacacaatggagt
actactcagttattaaaaaatgaatttatgaaattcctaggcagatggat
ggacctggagggcatcatcctgagtgagcatatgcccagaagatgctcca
acatataataaggacacatattccacactatgttcatagcagcctcattt
ataaaatccaaaagctagaaatagcccagatatccctcaacagaagaatg
gatacaaaaaaatgtagtatatttacacaacagaatactactcagctact
aaaaacaatgacttcatgtaacacaggcaaatgaatggtacttgaaatat
catcctgaatgaggtaacccagtcacaaaaaaaccacacacagtatgtac
tcagaatacccatgatacaactctcacactatatgaaacccaagaagaac
gaagaacacagcaaagtgtggattctacagtcctactcagaagggaaaga
agatagtcttgggaagtagaggggagaaatgaatctggggagggagaaag
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_68302249_68303393
seq2: B6Ng01-089F18.b_47_1194

seq1  GAATTCCTTCTTCCTCCCATCTTGCTCTATGCATGTAGAAGCATTGGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTTCCTCCCATCTTGCTCTATGCATGTAGAAGCATTGGTGA  50

seq1  GTTATGCACAGCCTGGCAGACTCATACTATGGACTAGTTCTGCGGGATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGCACAGCCTGGCAGACTCATACTATGGACTAGTTCTGCGGGATGC  100

seq1  TCTTGACCATGGGTACCCATTTCAGGTGGATGCTTAACTATGCCCAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGACCATGGGTACCCATTTCAGGTGGATGCTTAACTATGCCCAGCCA  150

seq1  CCTTAATATACTTAAAATTCCTTGAACCTGGAAAAGCACTTTTGTCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATATACTTAAAATTCCTTGAACCTGGAAAAGCACTTTTGTCTGAA  200

seq1  CACCCCACTGACCTTCCAAGCCTAATTCTCAGTTAGTTCCGCCACTTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCACTGACCTTCCAAGCCTAATTCTCAGTTAGTTCCGCCACTTAGA  250

seq1  TAATCGATGAAAAGAATTCAGATCAGGAATTCTGTTCTTCCTACCCCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCGATGAAAAGAATTCAGATCAGGAATTCTGTTCTTCCTACCCCAGA  300

seq1  CCCTTGGCCTGCATCTGTTGGCTCTTTCCTTTCACTTCATGTCATTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGCCTGCATCTGTTGGCTCTTTCCTTTCACTTCATGTCATTTCAG  350

seq1  TGAATGGATGGTCCCAGATCAACCTGAGGACCAACTTCTGGATTGCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGATGGTCCCAGATCAACCTGAGGACCAACTTCTGGATTGCTGGA  400

seq1  CTTTACTCTTGTACCTTGAGTTAGTCGGTTATTTTATAACAACATGCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTCTTGTACCTTGAGTTAGTCGGTTATTTTATAACAACATGCTTA  450

seq1  TATCTCAGTATCATACCACAATTTATCCTCTTGCCTCCATTCCTTGGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAGTATCATACCACAATTTATCCTCTTGCCTCCATTCCTTGGATC  500

seq1  TGCTTCTGGCTCCCTCACCATTTTTCTTTTGACTCCTATTCTCCGTGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTGGCTCCCTCACCATTTTTCTTTTGACTCCTATTCTCCGTGTCC  550

seq1  TCCGCTTCCTACACTAGGTTTGCTAAATCTTACCTCTCTTCCCACTATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCTTCCTACACTAGGTTTGCTAAATCTTACCTCTCTTCCCACTATGG  600

seq1  AATCTGCCCCCTCAGGTCACCACCTCTCTCCTGATCTGGAGGACTAAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCCCCCTCAGGTCACCACCTCTCTCCTGATCTGGAGGACTAAGGG  650

seq1  CCTAATTCTCTGCTATAACTTTGTTTGTTTGTTTGTTTTTGTTTTTTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTCTCTGCTATAACTTTGTTTGTTTGTTTGTTTTTGTTTTTTGTT  700

seq1  CTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTT  750

seq1  TGTAGACCAGGCTGGCTTCGAACTCAG-AAATCTGCCTGCCTCTGCCTCC  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGTAGACCAGGCTGGCTTCGAACTCAGAAAATCTGCCTGCCTCTGCCTCC  800

seq1  CAAGTGCTGGGTTAAAGGCGTGTGCCACCATCGCCTGGCTTCTGCTATAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCTGGGTTAAAGGCGTGTGCCACCATCGCCTGGCTTCTGCTATAA  850

seq1  CCTTTATTTAATGTACCTTGCACATGGGTAATGACTTTGCTCCCAGCCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTTAATGTACCTTGCACATGGGTAATGACTTTGCTCCCAGCCCC  900

seq1  CAGTGCATCTAAGCTGTGTGTATTAGTGCTTAGTGTGCTAGCCCATCCT-  948
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CAGTGCATCTAAGCTGTGTGTATTAGTGCTTAGTGTGCTAGCCCATCCTG  950

seq1  GGGCTCTTCTCACTTGCCTTATTCACC-GCATCCCC-TCCCCTGCTCTGG  996
      ||||||||||||||||||||||||||| |||||||| |||||||||||||
seq2  GGGCTCTTCTCACTTGCCTTATTCACCGGCATCCCCTTCCCCTGCTCTGG  1000

seq1  GTCTGAGTCCTATCCACTCACTGC-TAGCTCAGTTCTGGATCCCATTGTC  1045
      ||||||||||| ||  |||||||| |||||||||||||||| ||||||||
seq2  GTCTGAGTCCTTTCACCTCACTGCTTAGCTCAGTTCTGGATTCCATTGTC  1050

seq1  TTCCTTACCCGCACCATCTCCTGAGCTGACCCCATACCCTGCCATGGCTT  1095
       |||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTCCTTACCCGCACCATCTTCTGAGCTGACCCCATACCCTGCCATGGCTT  1100

seq1  TAAATACC-GTGTTCATAATGACTTCCAAATTTATATCTGTAGCTCTGCC  1144
         ||||| ||||||| ||||||   | ||||||  | ||   |||||||
seq2  ---ATACCGGTGTTCAAAATGACACTCCAATTTAACTGTGAGCCTCTGCC  1147

seq1  G  1145
      |
seq2  G  1148


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