BAC Information

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BAC

Clone NameB6Ng01-090F15
Chromosome15 (Build37)
Map Location 54,604,852 - 54,605,853
singlet/doubletsinglet
Overlap genenone
Upstream geneSamd12, EG665097, EG621631, Tnfrsf11b, LOC665280, EG383032, Colec10, Mal2, Nov, LOC665302
Downstream geneLOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6, Col14a1, Mrpl13, Mtbp, Sntb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090F15.bB6Ng01-090F15.g
ACCDH902676DH902677
length7171,250
definitionDH902676|Mus musculus domesticus DNA, BAC clone: B6Ng01-090F15, 5' end.DH902677|Mus musculus domesticus DNA, BAC clone: B6Ng01-090F15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcttcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
ttgtgtgtttgtggacccctttcttcctgtgtgtgtgagagaggtgtgtg
catgttcctagcagcatgtgttcacactcatacatgcatgcattgttgtt
gtttcaaggacgagatagtgggaacaatagaagataagtaagaagctcct
caatgacatggggttcaagtggaagtttcaggagatgtcatgtgatgcag
actcacctggtgttttgctgaggcaagcctgatgggaggacacgtgatgt
ttggagagagtatatggatactcaatggatagtgatggggcgcttgcata
tctagccttgcaacactttgttggtcttgagtctttgatgatcttcactt
ccttgagacaggcaagttgagagaccttttcctggtgtcctggttgttcc
caccgaattgtggcgactcatcagaggcctggtggtttctgctggatcgt
gccaccgatactgattcatgtttgctatcctgacactactgaagtggact
actggtgtcttgacaaacggagattggaatcactccaaagaataacttct
aaacagatctgcttctccctgtcctgtttatcatcctttctccccctacc
tttgggtggtgggctataagaggggtgtttgaaagcattgaaaacccttt
gttaaactacggtttta
gaattcagtggcaaagcacttgcctagcatgtgtaatgccctgcaagcca
tctccagctgtaaaggtagcttttatttgcctgatttaattgtctccaag
acttactgcctccatctgataacctaagactagtcctggaagcttctagc
tttcatacaatctaatctaagcctagaatgtttttcagcctctgaaagtt
gctgctcaatacactcaccctttctagtgctttctgacctctggctggct
agttcaacccagctatcctgtctcaaactcctctccaagctgactgactc
aatctggcttctctcagtttcttactgaatcactctgctcggcctcaaac
taactctggcaatatgttctaatcttccacctcctcattctctagatcac
tctgtcttcacctgtgtctagtttgttctcccttcaacctgtctctgtaa
aactctcccagtaaaactgggagttccttttctctctccacactgatctc
ttaggtagcttccctttcctctctcttcttgtgcgtgtcagtctcttctc
attctgtcaggtctttctctgattcatcactttgtctaccactcaattaa
acatcactttcaaatgtgtagacttccttctataaactaaccttaccttc
attgtttggaactaaaggtgtgtgttaaggcctagccacaccatatctag
aaacagtttattttttcccagtaaataacacaatcttgaggttcacagtg
ttatcaaatatcttgcattatcaagccctgaaaataagtaaataagtaat
ataaagtacaattgtgactggagagatggctcagcggttaagagcacgga
ctgcttctccagaggtactgagtttcaattcccagcaaccacatggtggc
tcacaaccatctttatgggatccagtgactcttctggtgttgtgaatgaa
gacagctgcatgtattcataataactaaaagtaaataaatcttttttagt
acaattgtgtatattttaaggtaatagtcactgtcataatgagaggatcc
aaatttggaactcaatattatagaccaaccctttatctcaagtctagtac
atcagagaaataattgaaaatttgtaaccaatttttaaaggtcaaaggat
aactgtcaatttaaagcgtcctgtgtaggaccatgttctaaagcctctta
agacatctagagccaatgagagaacgaccggcaattactcctttcttgag

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_54604852_54605853
seq2: B6Ng01-090F15.g_336_1318

seq1  CTGTCTCAAACTCCTCTCCAAGCTGACTGACTCAATCTGGCTTCTCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCAAACTCCTCTCCAAGCTGACTGACTCAATCTGGCTTCTCTCAG  50

seq1  TTTCTTACTGAATCACTCTGCTCGGCCTCAAACTAACTCTGGCAATATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTACTGAATCACTCTGCTCGGCCTCAAACTAACTCTGGCAATATGT  100

seq1  TCTAATCTTCCACCTCCTCATTCTCTAGATCACTCTGTCTTCACCTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCTTCCACCTCCTCATTCTCTAGATCACTCTGTCTTCACCTGTGT  150

seq1  CTAGTTTGTTCTCCCTTCAACCTGTCTCTGTAAAACTCTCCCAGTAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTGTTCTCCCTTCAACCTGTCTCTGTAAAACTCTCCCAGTAAAAC  200

seq1  TGGGAGTTCCTTTTCTCTCTCCACACTGATCTCTTAGGTAGCTTCCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGTTCCTTTTCTCTCTCCACACTGATCTCTTAGGTAGCTTCCCTTT  250

seq1  CCTCTCTCTTCTTGTGCGTGTCAGTCTCTTCTCATTCTGTCAGGTCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTCTTCTTGTGCGTGTCAGTCTCTTCTCATTCTGTCAGGTCTTTC  300

seq1  TCTGATTCATCACTTTGTCTACCACTCAATTAAACATCACTTTCAAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTCATCACTTTGTCTACCACTCAATTAAACATCACTTTCAAATGT  350

seq1  GTAGACTTCCTTCTATAAACTAACCTTACCTTCATTGTTTGGAACTAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACTTCCTTCTATAAACTAACCTTACCTTCATTGTTTGGAACTAAAG  400

seq1  GTGTGTGTTAAGGCCTAGCCACACCATATCTAGAAACAGTTTA-TTTTTC  449
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTGTGTGTTAAGGCCTAGCCACACCATATCTAGAAACAGTTTATTTTTTC  450

seq1  CCAGTAAATAACACAATCTTGAGGTTCACAGTGTTATCAAATATCTTGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAAATAACACAATCTTGAGGTTCACAGTGTTATCAAATATCTTGCA  500

seq1  TTATCAAGCCCTGAAAATAAGTAAATAAGTAATATAAAGTACAATTGTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAGCCCTGAAAATAAGTAAATAAGTAATATAAAGTACAATTGTGA  550

seq1  CTGGAGAGATGGCTCAGCGGTTAAGAGCACGGACTGCTCCTCCAGAGGTA  599
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTGGAGAGATGGCTCAGCGGTTAAGAGCACGGACTGCTTCTCCAGAGGTA  600

seq1  CTGAG-TTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTTTAAT  648
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTGAGTTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTTT-AT  649

seq1  GGGATCCAGTGCACTCTTCTGGTG-TGTGAATGAAGACAGCTGCAATGTA  697
      ||||||||||| |||||||||||| ||||||||||||||||||| |||||
seq2  GGGATCCAGTG-ACTCTTCTGGTGTTGTGAATGAAGACAGCTGC-ATGTA  697

seq1  TTCAT-ATAACTAAAAGTAAATAAATCTTTTTTAAGTACAATTGTGATAT  746
      ||||| ||||||||||||||||||||||||||| |||||||||||| || 
seq2  TTCATAATAACTAAAAGTAAATAAATCTTTTTT-AGTACAATTGTG-TA-  744

seq1  TATTTTAAGGTAATAGTCACTGTCATTATTGAGAGGATCCAAAATCTTGG  796
      ||||||||||||||||||||||||| || ||||||||||| |||| | | 
seq2  TATTTTAAGGTAATAGTCACTGTCA-TAATGAGAGGATCC-AAATTTGGA  792

seq1  ACTCAATATTTATAGACCAACCCTTTTATCTCAAAGTCTAGGTAACATCA  846
      |||||||| |||||||||||||| |||||||| ||||||||   ||||||
seq2  ACTCAATA-TTATAGACCAACCC-TTTATCTC-AAGTCTAG--TACATCA  837

seq1  GAGAAATAAATTTTGAAAAATTTGTAACACATTTTTAAAAGTTCAAAATG  896
      |||||||||   ||| |||||||||||| || |||| |||| |||||   
seq2  GAGAAATAA---TTG-AAAATTTGTAAC-CAATTTTTAAAGGTCAAAGGA  882

seq1  TATACTGTCAATTAAAAGCTGTCTTGTTTAAGTGGACCCAATG-TCTACA  945
      || |||||||||| ||||| ||| ||| ||   |||||  ||| |||| |
seq2  TA-ACTGTCAATTTAAAGC-GTCCTGTGTA---GGACC--ATGTTCTAAA  925

seq1  GCCTCTTAAGCATTCTGAGGCCAATATGA-AAGCAACGGCAATTATTCCT  994
      ||||||||||   |||   ||||||  || ||  | ||||||||| ||||
seq2  GCCTCTTAAGACATCTAGAGCCAATGAGAGAACGACCGGCAATTACTCCT  975

seq1  TTCTTGAG  1002
      ||||||||
seq2  TTCTTGAG  983