BAC Information

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BAC

Clone NameB6Ng01-091P06
Chromosome15 (Build37)
Map Location 9,530,552 - 9,531,724
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc1a3, EG622770, LOC268781, LOC382969, LOC100039619, Ranbp3l, 1110020G09Rik, Skp2, Lmbrd2, LOC666503, Ugt3a1, LOC100039661, Ugt3a2, LOC383094, Capsl, Il7r
Downstream geneC230086A09Rik, Prlr, Agxt2, 4930461P20Rik, Bxdc2, Rad1, 4930401A09Rik, EG666579, Rai14
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091P06.bB6Ng01-091P06.g
ACCDH903846DH903847
length1,1571,052
definitionDH903846|Mus musculus domesticus DNA, BAC clone: B6Ng01-091P06, 5' end.DH903847|Mus musculus domesticus DNA, BAC clone: B6Ng01-091P06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaattttttttcttgacattctggaaaacatacttcaaaatt
acttactgaatgcagttgctgaacaattgctgggtatcccttgagaaagt
tctggagggatgcttgtagtccacgaagccaccgtctccctcctatttga
gaaggcatcacaggttggaggtggaggcccctgaaggcagttatcagaga
actcttgaagagaggagagttgtgatagaaatggtaaatactggtgagga
gtgcttcaaggtcattgtagagagggacactctggaacatcgatttgtag
gacagttctagatgatgtgcgaagcaatacatactttgcacacatggctg
tatttctctcaaaagcagggccactctgttcttcccctctattccagggg
aatcatcacttccaaaaccaaccaacttcttcgcccagtcttggcttgac
agcttaagatgaagatttgtctctagagttttctcaatagcattttttat
tgccaaagagtcctttggttctactggctgcaacccaacaatctgacatt
gcacttttcctgcatgtgcaaattgaacatagaccattttggcttccttg
cctagactgtctacaattccatcagtgatgacagagaaaaagttactctt
ttctaggttttctcttagatttttcctctccacttcagcaatgaaatatg
taaatattcttgctgattttttagttctgaagactgggccaatatcaaca
cccttcatatcatccaatttacacatccagataaaatctttgaggggatg
tccggtcttgactagggcgtggcatgatctaaataagttctccactctcg
ccagggtcactttgctcatagtccttacagtcagctcagtggcagctctg
ttcactggagaaccactggtcacttccatcagtgacgccttggcatgggc
ttcactgagtgatgcgcactgagaaattcagccctgaagttgtccgtgcc
atagaggaaacttactgtacttcccctgacgtactccgtgcttacgacac
aggacacagaacataagttagtgctcatcaatatacaagccacgaatttt
ttagccaattcaggacttgcgaatttcttctgtagaagagtcaacttttg
tgacttt
gaattccatatgaagggagacttcccccaagccaacaacacacttcagtt
ccagttcaatggttctgagtgagggaattcagagtccagggaggagtgaa
atcagaaaacaagtagtagaatggtcagatattgaaaaaattcaataaaa
tggaaaatattcatatttcccttttcctaccctctgcacaaattccagat
gccctatctcgatctgcatggcctttgtcatctttgtctctgtcttttaa
aagcagaatactccaaagtacataggtgacaaggaagatcagcaacgctg
tccttgtctcttcatcatttattgtctctcctgccacatgggagcttttg
agactcattcattcccatttgtcagttgtggctgctctttcctggactac
tgagtccttgaaagtgaattcttacctttacttttaccctggtaatttca
catttttgagtcttagattacactctttgatctatttttgatgtctgact
ctttcccgtgtgggtatttagttgagctagcagtatttgcagaagagacc
atctttcctccagcacaagctttgtgccttcatcaaaacccaagtggctg
tagctgcatgcatccatttctgaatactatattttatcctactatgctta
tttgtttatgtgccttatcatggtggatctgttaccgtacctctgacttg
taatttgagatcaggtattaaaatactgttagaatatctcctttttctca
gattgctttgggtatctcgaatcttcatgaacattgtaatctttcctagt
tctatgaagaatgccactggaactttggtggtaaccatccagaaactgta
tgttgcttttgataatgtaatgtaaccactctcatatattgattctgctg
atccacgagtatgggagttcctttgtgtgggctatttcattttttttatt
cctttctggttttgtttgtttgtttgtttgtttgttttgatttgggtttt
agtgtgtgaggttccccagagctcaattaatctcctccgagatttctagg
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_9530552_9531724
seq2: B6Ng01-091P06.b_47_1203

seq1  GAATTCAGTAATTTTTTTTCTTGACATTCTGGAAAACATACTTCAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAATTTTTTTTCTTGACATTCTGGAAAACATACTTCAAAATT  50

seq1  ACTTACTGAATGCAGTTGCTGAACAATTGCTGGGTATCCCTTGAGAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTGAATGCAGTTGCTGAACAATTGCTGGGTATCCCTTGAGAAAGT  100

seq1  TCTGGAGGGATGCTTGTAGTCCACGAAGCCACCGTCTCCCTCCTATTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGGGATGCTTGTAGTCCACGAAGCCACCGTCTCCCTCCTATTTGA  150

seq1  GAAGGCATCACAGGTTGGAGGTGGAGGCCCCTGAAGGCAGTTATCAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCATCACAGGTTGGAGGTGGAGGCCCCTGAAGGCAGTTATCAGAGA  200

seq1  ACTCTTGAAGAGAGGAGAGTTGTGATAGAAATGGTAAATACTGGTGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGAAGAGAGGAGAGTTGTGATAGAAATGGTAAATACTGGTGAGGA  250

seq1  GTGCTTCAAGGTCATTGTAGAGAGGGACACTCTGGAACATCGATTTGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCAAGGTCATTGTAGAGAGGGACACTCTGGAACATCGATTTGTAG  300

seq1  GACAGTTCTAGATGATGTGCGAAGCAATACATACTTTGCACACATGGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTCTAGATGATGTGCGAAGCAATACATACTTTGCACACATGGCTG  350

seq1  TATTTCTCTCAAAAGCAGGGCCACTCTGTTCTTCCCCTCTATTCCAGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTCTCAAAAGCAGGGCCACTCTGTTCTTCCCCTCTATTCCAGGGG  400

seq1  AATCATCACTTCCAAAACCAACCAACTTCTTCGCCCAGTCTTGGCTTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCACTTCCAAAACCAACCAACTTCTTCGCCCAGTCTTGGCTTGAC  450

seq1  AGCTTAAGATGAAGATTTGTCTCTAGAGTTTTCTCAATAGCATTTTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAAGATGAAGATTTGTCTCTAGAGTTTTCTCAATAGCATTTTTTAT  500

seq1  TGCCAAAGAGTCCTTTGGTTCTACTGGCTGCAACCCAACAATCTGACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAAGAGTCCTTTGGTTCTACTGGCTGCAACCCAACAATCTGACATT  550

seq1  GCACTTTTCCTGCATGTGCAAATTGAACATAGACCATTTTGGCTTCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTTCCTGCATGTGCAAATTGAACATAGACCATTTTGGCTTCCTTG  600

seq1  CCTAGACTGTCTACAATTCCATCAGTGATGACAGAGAAAAAGTTACTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACTGTCTACAATTCCATCAGTGATGACAGAGAAAAAGTTACTCTT  650

seq1  TTCTAGGTTTTCTCTTAGATTTTTCCTCTCCACTTCAGCAATGAAATATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGTTTTCTCTTAGATTTTTCCTCTCCACTTCAGCAATGAAATATG  700

seq1  TAAATATTCTTGCTGATTTTTTAGTTCTGAAGACTGGGCCAATATCAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTCTTGCTGATTTTTTAGTTCTGAAGACTGGGCCAATATCAACA  750

seq1  CCCTTCATATCATCCAATTTACACATCCAGATAAAATCTTTGAGGGGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCATATCATCCAATTTACACATCCAGATAAAATCTTTGAGGGGATG  800

seq1  TCCGGTCTTGACTAGGGCGTGGCATGATCTAAATAAGTTCTCCACTCTCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGTCTTGACTAGGGCGTGGCATGATCTAAATAAGTTCTCCACTCTCG  850

seq1  CCAGGGTCACTTTGCTCATAGTCCTTACAGTCAGCTCAGTGGCAGCTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTCACTTTGCTCATAGTCCTTACAGTCAGCTCAGTGGCAGCTCTG  900

seq1  TTCACTGGAGAACCACTGGTCACTTCCATCAGTGACGCCTTGGCATGGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGGAGAACCACTGGTCACTTCCATCAGTGACGCCTTGGCATGGGC  950

seq1  TTCACTGAGGTGATGCGCACTGAGAAATTCAGCCCTGAAGTTGTCCGTGC  1000
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGA-GTGATGCGCACTGAGAAATTCAGCCCTGAAGTTGTCCGTGC  999

seq1  CATAGAGGAAACTTACTGTACTTCCCCCTGACGTTACTCCGTGCTTACGA  1050
      ||||||||||||||||||||||| ||||||||| ||||||||||||||||
seq2  CATAGAGGAAACTTACTGTACTT-CCCCTGACG-TACTCCGTGCTTACGA  1047

seq1  CACAGGACACAGAACATAAGGTTTAGTTGCTCATC-ATATACAAGCCAAG  1099
      ||||||||||||||||||||  |||| |||||||| |||||||||||| |
seq2  CACAGGACACAGAACATAAG--TTAG-TGCTCATCAATATACAAGCCACG  1094

seq1  GGTATTTTTTTAGCCAAATTTTCAAGAACTGGTGATTTCTTTCTGGTAGG  1149
         | ||||||||||||   ||| || ||| | || ||  |||| |||| 
seq2  ---AATTTTTTAGCCAA---TTC-AGGACTTGCGAATTTCTTCT-GTAG-  1135

seq1  AAGGAGTCAACTTTTTGTGACTTT  1173
       | |||||||| ||||||||||||
seq2  -AAGAGTCAAC-TTTTGTGACTTT  1157