BAC Information

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BAC

Clone NameB6Ng01-092F06
Chromosome15 (Build37)
Map Location 48,272,274 - 48,273,394
singlet/doubletsinglet
Overlap geneCsmd3
Upstream geneLOC100039485, LOC100039493
Downstream geneEG665146, LOC100039600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092F06.bB6Ng01-092F06.g
ACCDH904118DH904119
length1,110653
definitionDH904118|Mus musculus domesticus DNA, BAC clone: B6Ng01-092F06, 5' end.DH904119|Mus musculus domesticus DNA, BAC clone: B6Ng01-092F06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
taaatttagaagtgaaaatgaataagtataattttcatgaccacactaaa
aattatgtactttaataaatatgcaggaaaacattgtaaaattttactaa
tgtttatttccataaagatataaggtatactttcaacaacaaacatttgt
atctaaaataaaatagtaaaaatttgcatttatatggctctgactttgct
gtaaaatttgaaaatttttttcttatttgcctgatatttattaattttag
tttcatgcatatgtaatctttccctctttgctgagactgcttaagataaa
ttgaaaattgtttttgctacacagcaaaacacattttctttataacaaag
aaaatatataaatataatacaatagtatattagtaatactgtttgtgtca
ggttagagaatttctaactaatggaaaggtaaaattatgtattaaaacaa
atgatatttgctacttatagcaatacactatttttaaaaatatcagtatg
tggtatattttaaatatggaagtaaacatacatacacacacacacacaca
cacacacacacacacacacacacacacacttgaaagttccaaattgttca
tagtgaaaagttcatttgcagaaaatataaactcttaaaggcattgagag
attagaatttgaattagatctgaagagactgctcagcatttaaaagccta
gttgctcttatagaggaagcccttcagctccccaaaccctcagctttgtt
tactattctccagtctcaaggaattcaatgcacctttctaggctttaggg
ggcactaaaacacgtgtgctgcacaaacatacatggatgaaaaatatacc
tacacataaaataaaggtataattccaataatttaaaattggtaaaattg
attataaacttgagttagagtgatgatttagttgcaagtatgtcaaagga
gacttttatgaatacattgctgcatttcctctgtccttctgaaagtctag
actataagactttgtagttcaatttcgaaacttgtactttggtataatga
caacctaaaacccacaataacagatgcatcatagattttaatactggggt
ctgaaagtgc

gaattcttctttttcaaaggaaaatgatttcaatcttatctttctttctt
cctttctttctttcctttcctttccttttttttttttttttttttttttt
ttttttttttttttttttttttttttgaaaaaggggttctctatatagcc
ccgggtgtcccggaaccccttctgtaaacccgggaggccccaaacccaaa
aatcatcccgcccctgcccccccaatactaaaaataaaaaaatgccccct
ccctgcccccccccaatctttatttttatcatttttgcaaaaaatttttt
ttcctcttgaaaagtttatttctaatattcctttcccccatcccaaaagt
ttaagtataattttgaaaaaccccgggagggtaaaaaagcaaaaattttc
taaaggcttttttggaaaaagtcttatatttttttcatttactacaaagt
tatttttagggggtttacacctccaacaagttgaaaattattaaggataa
aaaccgggggtgggggtggcctagcatggttccggtaagctgtcaaggtc
aaaatcattttcaaggttcaatgaccatcttgcaacctaaatgatctatg
tcaaggttggcctggaattccgtctattttccaagaaatgcttcatccta
ctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_48272274_48273394
seq2: B6Ng01-092F06.b_56_1165

seq1  TAAATTTAGAAGTGAAAATGAATAAGTATAATTTTCATGACCACACTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTAGAAGTGAAAATGAATAAGTATAATTTTCATGACCACACTAAA  50

seq1  AATTATGTACTTTAATAAATATGCAGGAAAACATTGTAAAATTTTACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGTACTTTAATAAATATGCAGGAAAACATTGTAAAATTTTACTAA  100

seq1  TGTTTATTTCCATAAAGATATAAGGTATACTTTCAACAACAAACATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTTCCATAAAGATATAAGGTATACTTTCAACAACAAACATTTGT  150

seq1  ATCTAAAATAAAATAGTAAAAATTTGCATTTATATGGCTCTGACTTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAATAAAATAGTAAAAATTTGCATTTATATGGCTCTGACTTTGCT  200

seq1  GTAAAATTTGAAAATTTTTTTCTTATTTGCCTGATATTTATTAATTTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATTTGAAAATTTTTTTCTTATTTGCCTGATATTTATTAATTTTAG  250

seq1  TTTCATGCATATGTAATCTTTCCCTCTTTGCTGAGACTGCTTAAGATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGCATATGTAATCTTTCCCTCTTTGCTGAGACTGCTTAAGATAAA  300

seq1  TTGAAAATTGTTTTTGCTACACAGCAAAACACATTTTCTTTATAACAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATTGTTTTTGCTACACAGCAAAACACATTTTCTTTATAACAAAG  350

seq1  AAAATATATAAATATAATACAATAGTATATTAGTAATACTGTTTGTGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATATAAATATAATACAATAGTATATTAGTAATACTGTTTGTGTCA  400

seq1  GGTTAGAGAATTTCTAACTAATGGAAAGGTAAAATTATGTATTAAAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGAGAATTTCTAACTAATGGAAAGGTAAAATTATGTATTAAAACAA  450

seq1  ATGATATTTGCTACTTATAGCAATACACTATTTTTAAAAATATCAGTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATTTGCTACTTATAGCAATACACTATTTTTAAAAATATCAGTATG  500

seq1  TGGTATATTTTAAATATGGAAGTAAACATACATACACACACACACACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATATTTTAAATATGGAAGTAAACATACATACACACACACACACACA  550

seq1  CACACACACACACACACACACACACACACTTGAAAGTTCCAAATTGTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACTTGAAAGTTCCAAATTGTTCA  600

seq1  TAGTGAAAAGTTCATTTGCAGAAAATATAAACTCTTAAAGGCATTGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAAAGTTCATTTGCAGAAAATATAAACTCTTAAAGGCATTGAGAG  650

seq1  ATTAGAATTTGAATTAGATCTGAAGAGACTGCTCAGCATTTAAAAGCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAATTTGAATTAGATCTGAAGAGACTGCTCAGCATTTAAAAGCCTA  700

seq1  GTTGCTCTTATAGAGGAAGCCCTTCAGCTCCCCAAACCCTCAGCTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCTTATAGAGGAAGCCCTTCAGCTCCCCAAACCCTCAGCTTTGTT  750

seq1  TACTATTCTCCAGTCTCAAGGAATTCAATGCACCTTTCTAGGCTTTAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTCTCCAGTCTCAAGGAATTCAATGCACCTTTCTAGGCTTTAGGG  800

seq1  GGCACTAAAACACGTGTGCTGCACAAACATACATGGATGAAAAATATACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTAAAACACGTGTGCTGCACAAACATACATGGATGAAAAATATACC  850

seq1  TACACATAAAATAAAGGTTATAATTCCAATAATTTAAAATTGGTAAAATT  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TACACATAAAATAAAGG-TATAATTCCAATAATTTAAAATTGGTAAAATT  899

seq1  GATTATAAACTTGAGTTAGAGTGATGATTTAGTTGCAAGTATGTCAAAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATAAACTTGAGTTAGAGTGATGATTTAGTTGCAAGTATGTCAAAGG  949

seq1  AGACTTTTATGAATACATTGCTGCATTTCCTCTGTCCTTCTGAAAGTCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTTATGAATACATTGCTGCATTTCCTCTGTCCTTCTGAAAGTCTA  999

seq1  GACTAT-AGACTTTGTAGTTCAATTTCGAAACATGTAACTTTGGTAATAA  1049
      |||||| ||||||||||||||||||||||||| ||| |||||||| ||||
seq2  GACTATAAGACTTTGTAGTTCAATTTCGAAACTTGT-ACTTTGGT-ATAA  1047

seq1  TGACAACCTAAAAACCCAACAATAACAGGAATGCATCATAAGTATTTTAT  1099
      |||||||||||||  || ||||||||||  ||||||||| ||  ||| ||
seq2  TGACAACCTAAAA--CCCACAATAACAG--ATGCATCAT-AGATTTTAAT  1092

seq1  ACTGGGGTCCTGGATAAAGTGC  1121
      |||||||| |||   |||||||
seq2  ACTGGGGT-CTG---AAAGTGC  1110


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