BAC Information

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BAC

Clone NameB6Ng01-095O21
Chromosome15 (Build37)
Map Location 5,894,748 - 6,038,146
singlet/doubletdoublet
Overlap geneLOC100039358, LOC666323
Upstream gene4930455B06Rik, C7, Card6, Rpl37, LOC100039281, Prkaa1, Ttc33, Ptger4, LOC100039322, LOC100039308, LOC666291, LOC666319
Downstream geneDab2, C9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik, Osmr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095O21.bB6Ng01-095O21.g
ACCDH906734DH906735
length1,185893
definitionDH906734|Mus musculus domesticus DNA, BAC clone: B6Ng01-095O21, 5' end.DH906735|Mus musculus domesticus DNA, BAC clone: B6Ng01-095O21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(5,894,748 - 5,895,899)(6,037,536 - 6,038,146)
sequence
gaattccagttcttcagccttcaggctggaaaaaataacttgttgtgtaa
gctttggctttcttgtctgtacagagaacaaaaagttagccagggcccag
ggaattcttaagaagacagtgaatgtaaacttatcagtgtgactctttgt
gcctcagaacacgtgggttagttgttgaaatgtattactatccaatgagt
gaattatggctttagacaggtgaacttggattacctagactcactgggac
ctattgcttttcatgtgttaaagactatagaaaggcagagaagatagaaa
aaagaacattagtagcaccttgggacaataagagaagaaaatgtatgaat
agtatctggcaaaaactccagccatgaatatgtatttttgcttcacctag
aagtataactcttcattaagttaagaaaatacttgacattactttaacta
tatagttttaatatcaaagataagaagaagagagaaaacattctcgctaa
ttactgcaatggagaatttagacattcatttggccttgttagagcttaaa
atatttgactttctagacttgaaatatgtaaggttttgctctcacatatt
taatgaacttacagagtcaattaggaaataaactatcagaacataagcta
tcaaggactcaaggaaaatttccagctcagtagaagtgaaacgtagttgg
tagattagaaaaatatacatgaaatgtcaactagcgattgaataacccat
tcagtgacacttcacagttcctggaacttttcttatgtggtgagataaag
ttgttcatttacaaaacacaaaccattaaaaagtaatcaacttagatgcc
atagattaagtacttaaacataaatattttggttgcttggatacatcctc
agatttttttcacacagtattctatctgtggctggttagcaatcttttgt
attttaatttatcttcattataggtaataagtggtggtatgcatgtgtat
gtgagtggaacaacaccatgaaaaggagcacatggtggtatatgggtagg
tggaagagcaccaacttctggaaactaggttctctcttttatcatagtta
agttatgaagggaatcaacttaatgaaacagaaagtccacccccacttgg
gccagtgccaccggattgtgttaataacaatctta
gaattccctcctccccaaagacatacaacaaattcccaattctttattga
tgtttattggtttttctggcaaaaatgtaaaattcattgtattattggtc
actctgaggggccctgtctttcctccagctgcctcttctgctttatcttg
tgtttgtattccacattaatcttttgacaattgttttttgcttttacatt
taaataaaagtatgagttcatttgggtcttttcttcctatgtatggattt
taagattatgtttttcaatttctgtgaataatagtgttggaactttgata
gggattgctttgaatctgtagattgatttttgtaggatggccattttccc
aacaataatccttccaatccatgatattaagagaacatctttccatcttc
tgctctctgcttcaatttctttactcagtgttttaaagttttcattgtac
aaatccttggtcagatttatttggtacttttaagtgggcccacattctgt
aattgactaggtcctaggttctaggcagagtctaaagccattactttgct
aagtgaacgtagtattaaattgtcatttatctttatacttaatagattag
tgcatctctccaccctcgtgacaaacactgtgacatataacagatcaaca
ttcatagaagactatggtgtacatgtacatcgtaatatcctcctgcctta
gtttcaaaggtcactgtggaagaggaaatgaaaatattgtaagaggagga
agtagtggatatcttcagtgagacagtgtttgatggactgacccattaag
tatgtgatttcacagtagccatagcaacaggcacacaacctgtaagtcaa
ctaaaatcttagtacaggtggcagagctgataaagtctcattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_5894748_5895899
seq2: B6Ng01-095O21.b_45_1229

seq1  GAATTCCAGTTCTTCAGCCTTCAGGCTGGAAAAAATAACTTGTTGTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTCTTCAGCCTTCAGGCTGGAAAAAATAACTTGTTGTGTAA  50

seq1  GCTTTGGCTTTCTTGTCTGTACAGAGAACAAAAAGTTAGCCAGGGCCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGCTTTCTTGTCTGTACAGAGAACAAAAAGTTAGCCAGGGCCCAG  100

seq1  GGAATTCTTAAGAAGACAGTGAATGTAAACTTATCAGTGTGACTCTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTTAAGAAGACAGTGAATGTAAACTTATCAGTGTGACTCTTTGT  150

seq1  GCCTCAGAACACGTGGGTTAGTTGTTGAAATGTATTACTATCCAATGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGAACACGTGGGTTAGTTGTTGAAATGTATTACTATCCAATGAGT  200

seq1  GAATTATGGCTTTAGACAGGTGAACTTGGATTACCTAGACTCACTGGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATGGCTTTAGACAGGTGAACTTGGATTACCTAGACTCACTGGGAC  250

seq1  CTATTGCTTTTCATGTGTTAAAGACTATAGAAAGGCAGAGAAGATAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGCTTTTCATGTGTTAAAGACTATAGAAAGGCAGAGAAGATAGAAA  300

seq1  AAAGAACATTAGTAGCACCTTGGGACAATAAGAGAAGAAAATGTATGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACATTAGTAGCACCTTGGGACAATAAGAGAAGAAAATGTATGAAT  350

seq1  AGTATCTGGCAAAAACTCCAGCCATGAATATGTATTTTTGCTTCACCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTGGCAAAAACTCCAGCCATGAATATGTATTTTTGCTTCACCTAG  400

seq1  AAGTATAACTCTTCATTAAGTTAAGAAAATACTTGACATTACTTTAACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAACTCTTCATTAAGTTAAGAAAATACTTGACATTACTTTAACTA  450

seq1  TATAGTTTTAATATCAAAGATAAGAAGAAGAGAGAAAACATTCTCGCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTTTAATATCAAAGATAAGAAGAAGAGAGAAAACATTCTCGCTAA  500

seq1  TTACTGCAATGGAGAATTTAGACATTCATTTGGCCTTGTTAGAGCTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCAATGGAGAATTTAGACATTCATTTGGCCTTGTTAGAGCTTAAA  550

seq1  ATATTTGACTTTCTAGACTTGAAATATGTAAGGTTTTGCTCTCACATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGACTTTCTAGACTTGAAATATGTAAGGTTTTGCTCTCACATATT  600

seq1  TAATGAACTTACAGAGTCAATTAGGAAATAAACTATCAGAACATAAGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAACTTACAGAGTCAATTAGGAAATAAACTATCAGAACATAAGCTA  650

seq1  TCAAGGACTCAAGGAAAATTTCCAGCTCAGTAGAAGTGAAACGTAGTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGACTCAAGGAAAATTTCCAGCTCAGTAGAAGTGAAACGTAGTTGG  700

seq1  TAGATTAGAAAAATATACATGAAATGTCAACTAGCGATTGAATAACCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTAGAAAAATATACATGAAATGTCAACTAGCGATTGAATAACCCAT  750

seq1  TCAGTGACACTTCACAGTTCCTGGAACTTTTCTTATGTGGTGAGATAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGACACTTCACAGTTCCTGGAACTTTTCTTATGTGGTGAGATAAAG  800

seq1  TTGTTCATTTACAAAACACAAACCATTAAAAAGTAATCAACTTAGATGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCATTTACAAAACACAAACCATTAAAAAGTAATCAACTTAGATGCC  850

seq1  ATAGATTAAGTACTTAAACATAAATATTTT-GTTGCTTGGATACATCCTC  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATAGATTAAGTACTTAAACATAAATATTTTGGTTGCTTGGATACATCCTC  900

seq1  AGATTTTTTTCACACAGTA-TCTATCTGTGGCTAGTTAGCAATCTTTTTG  948
      ||||||||||||||||||| ||||||||||||| |||||||||| |||||
seq2  AGATTTTTTTCACACAGTATTCTATCTGTGGCTGGTTAGCAATC-TTTTG  949

seq1  TATTT--ATTTATC-TCA-TATAGGT-ATATGTG--TGTATGCATGTGTA  991
      |||||  ||||||| ||| ||||||| ||| |||   |||||||||||||
seq2  TATTTTAATTTATCTTCATTATAGGTAATAAGTGGTGGTATGCATGTGTA  999

seq1  TGTGAGTTGA--CACA-CATGAAA--GAGCACATG--TGTATAT-GGTA-  1032
      ||||||| ||   ||| |||||||  |||||||||   |||||| |||| 
seq2  TGTGAGTGGAACAACACCATGAAAAGGAGCACATGGTGGTATATGGGTAG  1049

seq1  GTG--AGAGCA-CAACTTCTGG-AACTA-GTTCTCTC-TTTATCAT--GT  1074
      |||  |||||| |||||||||| ||||| |||||||| ||||||||   |
seq2  GTGGAAGAGCACCAACTTCTGGAAACTAGGTTCTCTCTTTTATCATAGTT  1099

seq1  AAGTTATG-AGGGATCAAACTTACATG-AACAGAAA--CCCCACCCACTT  1120
      |||||||| |||||   |||||| ||| ||||||||  || | |||||||
seq2  AAGTTATGAAGGGAATCAACTTA-ATGAAACAGAAAGTCCACCCCCACTT  1148

seq1  -GGCCA-TGCCACC-GAT--TGTTAATAACAATCTTA  1152
       ||||| ||||||| |||  |||||||||||||||||
seq2  GGGCCAGTGCCACCGGATTGTGTTAATAACAATCTTA  1185

seq1: chr15_6037536_6038146
seq2: B6Ng01-095O21.g_67_677 (reverse)

seq1  GGAGAGATGCACTAATCTATTAAGTATAAAGATAAATGACAATTTAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATGCACTAATCTATTAAGTATAAAGATAAATGACAATTTAATAC  50

seq1  TACGTTCACTTAGCAAAGTAATGGCTTTAGACTCTGCCTAGAACCTAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTTCACTTAGCAAAGTAATGGCTTTAGACTCTGCCTAGAACCTAGGA  100

seq1  CCTAGTCAATTACAGAATGTGGGCCCACTTAAAAGTACCAAATAAATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTCAATTACAGAATGTGGGCCCACTTAAAAGTACCAAATAAATCTG  150

seq1  ACCAAGGATTTGTACAATGAAAACTTTAAAACACTGAGTAAAGAAATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGATTTGTACAATGAAAACTTTAAAACACTGAGTAAAGAAATTGA  200

seq1  AGCAGAGAGCAGAAGATGGAAAGATGTTCTCTTAATATCATGGATTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGAGCAGAAGATGGAAAGATGTTCTCTTAATATCATGGATTGGAA  250

seq1  GGATTATTGTTGGGAAAATGGCCATCCTACAAAAATCAATCTACAGATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTATTGTTGGGAAAATGGCCATCCTACAAAAATCAATCTACAGATTC  300

seq1  AAAGCAATCCCTATCAAAGTTCCAACACTATTATTCACAGAAATTGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATCCCTATCAAAGTTCCAACACTATTATTCACAGAAATTGAAAA  350

seq1  ACATAATCTTAAAATCCATACATAGGAAGAAAAGACCCAAATGAACTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATCTTAAAATCCATACATAGGAAGAAAAGACCCAAATGAACTCAT  400

seq1  ACTTTTATTTAAATGTAAAAGCAAAAAACAATTGTCAAAAGATTAATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATTTAAATGTAAAAGCAAAAAACAATTGTCAAAAGATTAATGTG  450

seq1  GAATACAAACACAAGATAAAGCAGAAGAGGCAGCTGGAGGAAAGACAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACAAACACAAGATAAAGCAGAAGAGGCAGCTGGAGGAAAGACAGGG  500

seq1  CCCCTCAGAGTGACCAATAATACAATGAATTTTACATTTTTGCCAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCAGAGTGACCAATAATACAATGAATTTTACATTTTTGCCAGAAAA  550

seq1  ACCAATAAACATCAATAAAGAATTGGGAATTTGTTGTATGTCTTTGGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATAAACATCAATAAAGAATTGGGAATTTGTTGTATGTCTTTGGGGA  600

seq1  GGAGGGAATTC  611
      |||||||||||
seq2  GGAGGGAATTC  611