BAC Information

Click to search

BAC

Clone NameB6Ng01-098J15
Chromosome7 (Build37)15 (Build37)
Map Location 33,220,624 - 33,221,09975,062,431 - 75,063,533
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373
Downstream geneEG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098J15.bB6Ng01-098J15.g
ACCDH908644DH908645
length4691,093
definitionDH908644|Mus musculus domesticus DNA, BAC clone: B6Ng01-098J15, 5' end.DH908645|Mus musculus domesticus DNA, BAC clone: B6Ng01-098J15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(33,220,624 - 33,221,099)(75,062,431 - 75,063,533)
sequence
ctgatctttccaagacttttatcatgaatgtgtgttggttcttgtcgaat
gctttttccgcatctaatgagatgatcatgtggtttttgtctttgagttt
gtttatataatggtttacgttgatggatttccatatattaaaccatccct
gcaaccctgtcataaaacctacttggtcaggatgaatgattgctttaatg
tgttcttggattcggttaacgagagttttattgagtatttttgcatcaat
attcataagagaaattggtctgaagttctctatctttgttggatctttct
gtggtttaggtatcagagtaattgtggcttcatagaatgagttgggtaga
gttccttctacttctattttgtggaattgtttgtgcagaactggaattag
atcttctttgaaggtctgatagaactttgcactaaagccatctggtcctg
ggctcttttttggggggag
gaattccatggctggacgtagatcatgtagatcacagcctgtgcttttta
cctgtctgatgagccagtctttgcctgtatcttcaagagttaatgttttc
ttatcccagaccacttccctttaaaaccttgaccactgctaatagcttat
acaatttgcccttgtgagaaatgtcatttgtatttgacagcagcctaagt
gactaggaaatctttgaaacaggccacccctgatacccacaggcattaca
tttacctcaggccaatcatacttcctagacctttgcattgagcattgttt
caaagtcaacaagaaaccatcttatggatgaagctatatgtaaagatctt
cagtgtaaacattaagctctgctgtactcatggggctggatgatttttat
ctgaatacatctcctaaatgtgggctgtgctcaattaaatatggctaata
taaaatgatctgggtcagactctacaagtcttagcccagcactggtacta
aaatcaggctcatcggagttttatttgtaactcttccttatttttcccct
gcctactctaaagtctacatacacacacacacacacacacacacacacac
acacacacacacacacacagagtgaaaggagatttaataaataggatcca
acctcaaggtcatcttcagtagcaatgtgaggaagaagggcagaggttag
atgatagagcttacaggtttagtataggaaagcagtcatgaccaaagtgg
tgtctagctgagcactatccaatttcttcagggtcatctattcagtggca
gatgaagcctgagacaccattgtcccctttagtcttctaggaacatccac
tggtgtcaaacagatccttggttttgatgcagaaaggaatctgtggatgg
gccttaaattaaaagcaaaagaaagtgctcagggaaggataagtgataca
agggaaatggatagcatttcacagtatgagtggtataatgtgcattagaa
catatggacaggaaacaattggagtcattttgagtggaggtcaagtatat
tttacttcctagacctcccgggccactggcattctgccttgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33220624_33221099
seq2: B6Ng01-098J15.b_49_523 (reverse)

seq1  CTCCCAGCCAAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCT  50
      |||||  |||||||| ||||||||||||||||| ||||||||| ||||||
seq2  CTCCC-CCCAAAAAAGAGCCCAGGACCAGATGGCTTTAGTGCAAAGTTCT  49

seq1  ACCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCATAAAGTATTCCAC  100
      | ||||||||||||||||||||||||||||||||||| |||  |||||||
seq2  ATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACAATTCCAC  99

seq1  AAAATAGAAGTAGATGGAACTCTACCCAACTCATTCTATGAAGCCACAAT  150
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAAATAGAAGTAGAAGGAACTCTACCCAACTCATTCTATGAAGCCACAAT  149

seq1  TACTCTGATACCTAAACCACAGAAAGATCCAAAAAAGATAGAGAACTTCA  200
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCA  199

seq1  GACCAATTTCCCTTATGAATATAGATGCAAAAATCCTCAATAAAATTCTC  250
      |||||||||| ||||||||||| ||||||||||| |||||||||| ||||
seq2  GACCAATTTCTCTTATGAATATTGATGCAAAAATACTCAATAAAACTCTC  249

seq1  GCTAACCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGT  300
      | ||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTTAACCGAATCCAAGAACACATTAAAGCAATCATTCATCCTGACCAAGT  299

seq1  AGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATTCGGAAATCCATCA  350
      |||||||||  ||||| |||||||||||||||||||  ||||||||||||
seq2  AGGTTTTATGACAGGGTTGCAGGGATGGTTTAATATATGGAAATCCATCA  349

seq1  ACGTAATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATC  400
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAAACCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATC  399

seq1  TCGTTAGATGCGGAAAAAGCATTCGACAAGATCCAACACCCATTCATGAT  450
      || |||||||||||||||||||||||||||| ||||||| ||||||||||
seq2  TCATTAGATGCGGAAAAAGCATTCGACAAGAACCAACACACATTCATGAT  449

seq1  AAAAGTCTTGGAAAGATCAGGAATTC  476
      ||||||||||||||||||||||||||
seq2  AAAAGTCTTGGAAAGATCAGGAATTC  475

seq1: chr15_75062431_75063533
seq2: B6Ng01-098J15.g_68_1160 (reverse)

seq1  GTCAA-GCAGTATGCCAGTTGCCCGGGGAGGTCTTAGGAAGTTAAATATT  49
      ||||| |||| |||||||| |||| |||||||| |||||||| ||||| |
seq2  GTCAAGGCAGAATGCCAGTGGCCC-GGGAGGTC-TAGGAAGTAAAATA-T  47

seq1  ACTTGACCTCCACTCAAAATGGCTTCAATTTGTTTCCTTGTACATATGGT  99
      ||||||||||||||||||||| || ||| |||||||| ||| ||||| ||
seq2  ACTTGACCTCCACTCAAAATGACTCCAA-TTGTTTCC-TGTCCATAT-GT  94

seq1  ACTAATGCACCATTTATACCACTCATACTTGTGAAATGCCTATCCATTTC  149
       |||||||||   ||||||||||||||| ||||||||| |||||||||||
seq2  TCTAATGCAC--ATTATACCACTCATAC-TGTGAAATG-CTATCCATTTC  140

seq1  CCTTGTATCACTTATTCCTTCCCTGAGCACCTTTCTTTCTGCTTTTAATT  199
      |||||||||||||| |||||||||||||| |||||||| |||||||||||
seq2  CCTTGTATCACTTA-TCCTTCCCTGAGCA-CTTTCTTT-TGCTTTTAATT  187

seq1  TAAGGCCCATCCACAGATTCCTTTCTGCATCAAAACCAAGGATCTGTTTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCCCATCCACAGATTCCTTTCTGCATCAAAACCAAGGATCTGTTTG  237

seq1  ACACCAGTGGATGTTCCTAGAAGACTAAAGGGGAC-ATGGTGTCTCAGGC  298
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACACCAGTGGATGTTCCTAGAAGACTAAAGGGGACAATGGTGTCTCAGGC  287

seq1  TTCATCTGCCACTGAATAGATGACCTTGAAG-AATTGGATAGTGCTCAGC  347
      ||||||||||||||||||||||||| ||||| ||||||||||||||||||
seq2  TTCATCTGCCACTGAATAGATGACCCTGAAGAAATTGGATAGTGCTCAGC  337

seq1  TAGACACCACTTTGGTCATGACTGCTTTCCTATACTAAACCTGTAAGCTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACCACTTTGGTCATGACTGCTTTCCTATACTAAACCTGTAAGCTC  387

seq1  TATCATCTAACCTCTGCCCTTCTTCCTCACATTGCTACTGAAGATGACCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCTAACCTCTGCCCTTCTTCCTCACATTGCTACTGAAGATGACCT  437

seq1  TGAGGTTGGATCCTATTTATTAAATCTCCTTTCACTCTGTGTGTGTGTGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTGGATCCTATTTATTAAATCTCCTTTCACTCTGTGTGTGTGTGT  487

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTAGACTTTAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTAGACTTTAGA  537

seq1  GTAGGCAGGGGAAAAATAAGGAAGAGTTACAAATAAAACTCCGATGAGCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCAGGGGAAAAATAAGGAAGAGTTACAAATAAAACTCCGATGAGCC  587

seq1  TGATTTTAGTACCAGTGCTGGGCTAAGACTTGTAGAGTCTGACCCAGATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTAGTACCAGTGCTGGGCTAAGACTTGTAGAGTCTGACCCAGATC  637

seq1  ATTTTATATTAGCCATATTTAATTGAGCACAGCCCACATTTAGGAGATGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATATTAGCCATATTTAATTGAGCACAGCCCACATTTAGGAGATGT  687

seq1  ATTCAGATAAAAATCATCCAGCCCCATGAGTACAGCAGAGCTTAATGTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGATAAAAATCATCCAGCCCCATGAGTACAGCAGAGCTTAATGTTT  737

seq1  ACACTGAAGATCTTTACATATAGCTTCATCCATAAGATGGTTTCTTGTTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAAGATCTTTACATATAGCTTCATCCATAAGATGGTTTCTTGTTG  787

seq1  ACTTTGAAACAATGCTCAATGCAAAGGTCTAGGAAGTATGATTGGCCTGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAAACAATGCTCAATGCAAAGGTCTAGGAAGTATGATTGGCCTGA  837

seq1  GGTAAATGTAATGCCTGTGGGTATCAGGGGTGGCCTGTTTCAAAGATTTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATGTAATGCCTGTGGGTATCAGGGGTGGCCTGTTTCAAAGATTTC  887

seq1  CTAGTCACTTAGGCTGCTGTCAAATACAAATGACATTTCTCACAAGGGCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCACTTAGGCTGCTGTCAAATACAAATGACATTTCTCACAAGGGCA  937

seq1  AATTGTATAAGCTATTAGCAGTGGTCAAGGTTTTAAAGGGAAGTGGTCTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTATAAGCTATTAGCAGTGGTCAAGGTTTTAAAGGGAAGTGGTCTG  987

seq1  GGATAAGAAAACATTAACTCTTGAAGATACAGGCAAAGACTGGCTCATCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAGAAAACATTAACTCTTGAAGATACAGGCAAAGACTGGCTCATCA  1037

seq1  GACAGGTAAAAAGCACAGGCTGTGATCTACATGATCTACGTCCAGCCATG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTAAAAAGCACAGGCTGTGATCTACATGATCTACGTCCAGCCATG  1087

seq1  GAATTC  1103
      ||||||
seq2  GAATTC  1093