BAC Information

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BAC

Clone NameB6Ng01-100N21
Chromosome15 (Build37)
Map Location 67,016,605 - 67,017,695
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1, Tg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
Downstream geneZfat1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100N21.bB6Ng01-100N21.g
ACCDH910235DH910236
length1,0771,194
definitionDH910235|Mus musculus domesticus DNA, BAC clone: B6Ng01-100N21, 5' end.DH910236|Mus musculus domesticus DNA, BAC clone: B6Ng01-100N21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactcgcaaatccatgtcaacatagatgaaatcttaactcttcc
ccttaagaagtctcctgttagacgctcactttaaacagacttcaggaaac
agattctttaaacatcctcccccaatgtttaaactgacaggacatgccaa
cagatggaaggcaggcagtaagagaataaggagacttataaacaggaggg
ctaccagtttctttgaattaacaaaatggggcaaggttggtaatatctta
tttacatttcctcattgaaagactgtatccaaattaagggacaactcagt
cccatttgaaatagtcattgaaagactagtctgccttaagcccgttagaa
atgtctttaagtacaccccactccaaaggtgctagctttcatccacagcc
atccctgccttttccaaacctctgtatgattctgaacttttccagcatgg
acaggggtttggagctggcataaacaagttgagcttcataccacaggcaa
gctccgtcctgaacttatgatttaagagccatactgttctggctgtagtg
caaagacagtttccttcctcttcacaggtagatttagactatttgctagt
tactatggcaacaagaaactacaagtccacattttatagatggatctggt
tttcctacccttggccttgatctaagtttagtgatttagcctcttgtact
ttgcagcacagactgctaatggcccccagatacccattgcctttagcacc
tgaacacttgggataaaaatgtttattcaatacccctcaaagctacagaa
ttgaaactcaaccaagcagggatatgttagtgaaagtatttgggagagcc
tatagatagtgtctttaatggtaaagtgggtgctcttttctcctaatgtt
caaaataaaaaatctgatgcctaaagctagacaatttgtcctatgagata
tacttagaatggctgaattttattaacaactatggatcaagtagatgagc
ctgggccctgcaaatgaaaatgcatacctgaatgttctcaaactgaaacg
gagaaattcactctaatgactagtagt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccatctggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactagcatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaggattatgctgaaa
ggaccctgatatagctgtctgtctcttgtcagagtttgcctgggcctagc
aaacatagaagtggatgctcacagtcggctattggaatggatcacatggc
cccaatgaaggagctagagaagttcaaagagctaaagggatcttgcaacc
ttataggtggacacattattgagctagcagtactcgagctcttgtactct
agctgcattatgccatcaaaagatggcctagtcgggcatatcactgaaag
agagccattggaaccgcaactttatatggtctagtttacatgggaacgct
cagggtccattaaaaggtatatgtcttcgctgatgtcgatatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_67016605_67017695
seq2: B6Ng01-100N21.b_50_1126 (reverse)

seq1  ACTACTTAGTCATATAGAGGTGAATTTCTCCCGTTTTCAGTTCTGAGACA  50
      ||||| ||||||| |||| ||||||||||||   |||||||| |||||  
seq2  ACTAC-TAGTCAT-TAGA-GTGAATTTCTCC--GTTTCAGTT-TGAGAAC  44

seq1  ATTCAGGTATGCCATTTTACAATTTGCAGGGCCCAGGCTTCATCTACTTT  100
      ||||||||||| ||||||   ||||||||||||||||| |||||||| ||
seq2  ATTCAGGTATG-CATTTT--CATTTGCAGGGCCCAGGC-TCATCTAC-TT  89

seq1  GATCCATAGTTGTTAATAAAATTCCAGCCATTCCTAAGTATATCTCATAG  150
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  GATCCATAGTTGTTAATAAAATT-CAGCCATT-CTAAGTATATCTCATAG  137

seq1  GACAAATTGTTCTAGCTTTAGGCATCAGATTTTTTATTTTGAACATTAGG  200
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATTG-TCTAGCTTTAGGCATCAGATTTTTTATTTTGAACATTAGG  186

seq1  AGAAAAGAGCACCCACTTTACCATTAAAGACACTATCTATAGGCTCTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAGCACCCACTTTACCATTAAAGACACTATCTATAGGCTCTCCC  236

seq1  AAATACTTTCACTAACATATCCCTGCTTGGTTGAGTTTCAATTCTGTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTTCACTAACATATCCCTGCTTGGTTGAGTTTCAATTCTGTAGC  286

seq1  TTTGAGGGGTATTGAATAAACATTTTTATCCCAAGTGTTCAGGTGCTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGGGTATTGAATAAACATTTTTATCCCAAGTGTTCAGGTGCTAAA  336

seq1  GGCAATGGGTATCTGGGGGCCATTAGCAGTCTGTGCTGCAAAGTACAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATGGGTATCTGGGGGCCATTAGCAGTCTGTGCTGCAAAGTACAAGA  386

seq1  GGCTAAATCACTAAACTTAGATCAAGGCCAAGGGTAGGAAAACCAGATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAATCACTAAACTTAGATCAAGGCCAAGGGTAGGAAAACCAGATCC  436

seq1  ATCTATAAAATGTGGACTTGTAGTTTCTTGTTGCCATAGTAACTAGCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATAAAATGTGGACTTGTAGTTTCTTGTTGCCATAGTAACTAGCAAA  486

seq1  TAGTCTAAATCTACCTGTGAAGAGGAAGGAAACTGTCTTTGCACTACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTAAATCTACCTGTGAAGAGGAAGGAAACTGTCTTTGCACTACAGC  536

seq1  CAGAACAGTATGGCTCTTAAATCATAAGTTCAGGACGGAGCTTGCCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAGTATGGCTCTTAAATCATAAGTTCAGGACGGAGCTTGCCTGTG  586

seq1  GTATGAAGCTCAACTTGTTTATGCCAGCTCCAAACCCCTGTCCATGCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAAGCTCAACTTGTTTATGCCAGCTCCAAACCCCTGTCCATGCTGG  636

seq1  AAAAGTTCAGAATCATACAGAGGTTTGGAAAAGGCAGGGATGGCTGTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCAGAATCATACAGAGGTTTGGAAAAGGCAGGGATGGCTGTGGA  686

seq1  TGAAAGCTAGCACCTTTGGAGTGGGGTGTACTTAAAGACATTTCTAACGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCTAGCACCTTTGGAGTGGGGTGTACTTAAAGACATTTCTAACGG  736

seq1  GCTTAAGGCAGACTAGTCTTTCAATGACTATTTCAAATGGGACTGAGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAGGCAGACTAGTCTTTCAATGACTATTTCAAATGGGACTGAGTTG  786

seq1  TCCCTTAATTTGGATACAGTCTTTCAATGAGGAAATGTAAATAAGATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTAATTTGGATACAGTCTTTCAATGAGGAAATGTAAATAAGATATT  836

seq1  ACCAACCTTGCCCCATTTTGTTAATTCAAAGAAACTGGTAGCCCTCCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCTTGCCCCATTTTGTTAATTCAAAGAAACTGGTAGCCCTCCTGT  886

seq1  TTATAAGTCTCCTTATTCTCTTACTGCCTGCCTTCCATCTGTTGGCATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGTCTCCTTATTCTCTTACTGCCTGCCTTCCATCTGTTGGCATGT  936

seq1  CCTGTCAGTTTAAACATTGGGGGAGGATGTTTAAAGAATCTGTTTCCTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAGTTTAAACATTGGGGGAGGATGTTTAAAGAATCTGTTTCCTGA  986

seq1  AGTCTGTTTAAAGTGAGCGTCTAACAGGAGACTTCTTAAGGGGAAGAGTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTTTAAAGTGAGCGTCTAACAGGAGACTTCTTAAGGGGAAGAGTT  1036

seq1  AAGATTTCATCTATGTTGACATGGATTTGCGAGTTGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTCATCTATGTTGACATGGATTTGCGAGTTGAATTC  1077