BAC Information

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BAC

Clone NameB6Ng01-101A15
Chromosome15 (Build37)
Map Location 66,282,847 - 66,427,408
singlet/doubletdoublet
Overlap geneLrrc6, Tmem71, LOC100040881, Phf20l1
Upstream geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3, LOC100040860
Downstream geneTg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101A15.bB6Ng01-101A15.g
ACCDH910350DH910351
length3331,144
definitionDH910350|Mus musculus domesticus DNA, BAC clone: B6Ng01-101A15, 5' end.DH910351|Mus musculus domesticus DNA, BAC clone: B6Ng01-101A15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,282,847 - 66,283,179)(66,426,254 - 66,427,408)
sequence
ataacaactatgacaacaggcacaatacctgcacaggttcaagccagaca
aagtccaacactaaagctgggtggacacaaagttccacccctaactaaga
agctatttgcaactggtagctgctggagaggaaataccagttggtttttt
ccccaatagagtgtcaatgaataaaacaatgcaaatcattgagaggagtt
atttgctctagagctaaagtatatcaaccacacaccagggtgggccccat
gactagaagtagctggtcaacacaaatcagattccatggtgtgatggagt
acagtatggggtgcatgcgtgtgtgtgtgtgtg
gaattccttacacatccttcttaaatgtttgttccttctatcttaccttc
tatttctttcaagcttatttttaatttgaacctaaagtttaaactttctc
cattgctttcatcacctccaaacaaaattcaaatcctttagcaaggttct
aaagtttttcaggtcctgattgttgcttctgtccaaccatgtccctacta
tttcattgcaaacaaagcccttctggctcttcttccactagcttatgtgt
ctttcacaactttactgaagtgtctcctgagtagatcacatgccctttca
aagaacctgtcactaagtgtgtgcagcgtttgtttctttaaaaatggcag
ttaagttgtggtcaagtttattatataaatatggtatttgaagattaata
ttctgtctgaaagatttcttaggttcatgggaaatcttactaacacacct
cgtattttgattcaggctgggaagtcatgagtcatgtcactctgaaatat
ttaacaaatattcccatagagagtactaacagaaaatccacacagaacag
tataaaacaagaaaaaagttatatgagacaattatataccttaatggaaa
tttaaatctcagtcctatttatgtctcaggtcatgtcaaatgcatacctt
ctttgttaattgcttcaatcttggcagggtaatagcgacagtctgtccaa
cgagccagtacttcttctccagctttaaaatcctattcaaacaactttta
agatcaatttcaaatataataaatatttcattaacaaaaaaagctgttaa
atttgacaggatccttttaaaatgtcattatttatgaaaggaacaactgg
gaaaagattcctacttacaaagagctctttctcatcctttggccttcttt
ccttagtgcaggtctctcaggggtcgcaacctgttgctgtcccagtaaat
ccactcatcatatcgatgactccagcgctcaaatggactagcattcttcc
ctctcatatcaattttttcaattcgggatggaaactcaaaaaaatttaaa
gcttcatatcaaaaaaatccttctgttgtcaatataaattaagcaaaaga
ttttaatgggtacacttaccatttaacctggagaaaagttagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_66282847_66283179
seq2: B6Ng01-101A15.b_47_379

seq1  ATAACAACTATGACAACAGGCACAATACCTGCACAGGTTCAAGCCAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAACTATGACAACAGGCACAATACCTGCACAGGTTCAAGCCAGACA  50

seq1  AAGTCCAACACTAAAGCTGGGTGGACACAAAGTTCCACCCCTAACTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCAACACTAAAGCTGGGTGGACACAAAGTTCCACCCCTAACTAAGA  100

seq1  AGCTATTTGCAACTGGTAGCTGCTGGAGAGGAAATACCAGTTGGTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTTGCAACTGGTAGCTGCTGGAGAGGAAATACCAGTTGGTTTTTT  150

seq1  CCCCAATAGAGTGTCAATGAATAAAACAATGCAAATCATTGAGAGGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAATAGAGTGTCAATGAATAAAACAATGCAAATCATTGAGAGGAGTT  200

seq1  ATTTGCTCTAGAGCTAAAGTATATCAACCACACACCAGGGTGGGCCCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTCTAGAGCTAAAGTATATCAACCACACACCAGGGTGGGCCCCAT  250

seq1  GACTAGAAGTAGCTGGTCAACACAAATCAGATTCCATGGTGTGATGGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGAAGTAGCTGGTCAACACAAATCAGATTCCATGGTGTGATGGAGT  300

seq1  ACAGTATGGGGTGCATGCGTGTGTGTGTGTGTG  333
      |||||||||||||||||||||||||||||||||
seq2  ACAGTATGGGGTGCATGCGTGTGTGTGTGTGTG  333

seq1: chr15_66426254_66427408
seq2: B6Ng01-101A15.g_68_1211 (reverse)

seq1  TACTAACTTTTCT-CAGTTTTAATGGTAAGTTGTACCCATTAAAATCTTT  49
      ||||||||||||| ||| || ||||||||| |||||||||||||||||||
seq2  TACTAACTTTTCTCCAGGTTAAATGGTAAG-TGTACCCATTAAAATCTTT  49

seq1  CTGCTTAATTTATATTTGACAACAGAAGGATTTTTTTTGATATGAAGCTT  99
       ||||||||||||| ||||||||||||||| |||||||||||||||||  
seq2  -TGCTTAATTTATA-TTGACAACAGAAGGA-TTTTTTTGATATGAAGC--  94

seq1  TTTAATTTTTTTTGAGGTATCCATCCCGAATTGAAAAAATTGATTATGAA  149
      ||||| ||||||||| || |||||||||||||||||||||||| ||||| 
seq2  TTTAAATTTTTTTGA-GTTTCCATCCCGAATTGAAAAAATTGA-TATGA-  141

seq1  GAAGGGAAG-ATGCTAGTCCATTTTGAGCGCTGGAGTCATCGATATGATG  198
        ||||||| ||||||||||| ||||||||||||||||||||||||||||
seq2  -GAGGGAAGAATGCTAGTCCA-TTTGAGCGCTGGAGTCATCGATATGATG  189

seq1  AGTGGATTTACTGGGACAGCAACAGGTTGCGACCCCTTGAGAGACCTGCA  248
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGTGGATTTACTGGGACAGCAACAGGTTGCGACCCC-TGAGAGACCTGCA  238

seq1  CTAAGGAAAGAAGGGCTAAAGGATGAGGAAGAGCTCTTTGTAAGTAGGAA  298
      |||||||||||| ||| |||||||||| ||||||||||||||||||||||
seq2  CTAAGGAAAGAA-GGCCAAAGGATGAGAAAGAGCTCTTTGTAAGTAGGAA  287

seq1  TCTTTTCCCAGTTGTTCCTTTCATAAATAATGACATTTTAAAAGGATCCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCCCAGTTGTTCCTTTCATAAATAATGACATTTTAAAAGGATCCT  337

seq1  GTCAAATTTAACAGCTTTTTTTGTTAATGAAATATTTATTATATTTGAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATTTAACAGCTTTTTTTGTTAATGAAATATTTATTATATTTGAAA  387

seq1  TTGATCTTAAAAGTTGTTTGAATAGGATTTTAAAGCTGGAGAAGAAGTAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTTAAAAGTTGTTTGAATAGGATTTTAAAGCTGGAGAAGAAGTAC  437

seq1  TGGCTCGTTGGACAGACTGTCGCTATTACCCTGCCAAGATTGAAGCAATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCGTTGGACAGACTGTCGCTATTACCCTGCCAAGATTGAAGCAATT  487

seq1  AACAAAGAAGGTATGCATTTGACATGACCTGAGACATAAATAGGACTGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGAAGGTATGCATTTGACATGACCTGAGACATAAATAGGACTGAG  537

seq1  ATTTAAATTTCCATTAAGGTATATAATTGTCTCATATAACTTTTTTCTTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATTTCCATTAAGGTATATAATTGTCTCATATAACTTTTTTCTTG  587

seq1  TTTTATACTGTTCTGTGTGGATTTTCTGTTAGTACTCTCTATGGGAATAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATACTGTTCTGTGTGGATTTTCTGTTAGTACTCTCTATGGGAATAT  637

seq1  TTGTTAAATATTTCAGAGTGACATGACTCATGACTTCCCAGCCTGAATCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAATATTTCAGAGTGACATGACTCATGACTTCCCAGCCTGAATCA  687

seq1  AAATACGAGGTGTGTTAGTAAGATTTCCCATGAACCTAAGAAATCTTTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACGAGGTGTGTTAGTAAGATTTCCCATGAACCTAAGAAATCTTTCA  737

seq1  GACAGAATATTAATCTTCAAATACCATATTTATATAATAAACTTGACCAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAATATTAATCTTCAAATACCATATTTATATAATAAACTTGACCAC  787

seq1  AACTTAACTGCCATTTTTAAAGAAACAAACGCTGCACACACTTAGTGACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAACTGCCATTTTTAAAGAAACAAACGCTGCACACACTTAGTGACA  837

seq1  GGTTCTTTGAAAGGGCATGTGATCTACTCAGGAGACACTTCAGTAAAGTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTTGAAAGGGCATGTGATCTACTCAGGAGACACTTCAGTAAAGTT  887

seq1  GTGAAAGACACATAAGCTAGTGGAAGAAGAGCCAGAAGGGCTTTGTTTGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAGACACATAAGCTAGTGGAAGAAGAGCCAGAAGGGCTTTGTTTGC  937

seq1  AATGAAATAGTAGGGACATGGTTGGACAGAAGCAACAATCAGGACCTGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATAGTAGGGACATGGTTGGACAGAAGCAACAATCAGGACCTGAA  987

seq1  AAACTTTAGAACCTTGCTAAAGGATTTGAATTTTGTTTGGAGGTGATGAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTAGAACCTTGCTAAAGGATTTGAATTTTGTTTGGAGGTGATGAA  1037

seq1  AGCAATGGAGAAAGTTTAAACTTTAGGTTCAAATTAAAAATAAGCTTGAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGGAGAAAGTTTAAACTTTAGGTTCAAATTAAAAATAAGCTTGAA  1087

seq1  AGAAATAGAAGGTAAGATAGAAGGAACAAACATTTAAGAAGGATGTGTAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGAAGGTAAGATAGAAGGAACAAACATTTAAGAAGGATGTGTAA  1137

seq1  GGAATTC  1155
      |||||||
seq2  GGAATTC  1144