BAC Information

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BAC

Clone NameB6Ng01-101B06
Chromosome15 (Build37)
Map Location 34,286,823 - 34,414,420
singlet/doubletdoublet
Overlap geneMatn2, Rpl30, BC030476, Hrsp12
Upstream genePgcp, 1700084J12Rik, Tspyl5, LOC675463, Mtdh, Laptm4b
Downstream genePop1, Npal2, Kcns2, Stk3, Osr2, Vps13b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101B06.bB6Ng01-101B06.g
ACCDH910380DH910381
length1,100925
definitionDH910380|Mus musculus domesticus DNA, BAC clone: B6Ng01-101B06, 5' end.DH910381|Mus musculus domesticus DNA, BAC clone: B6Ng01-101B06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,413,291 - 34,414,420)(34,286,823 - 34,287,747)
sequence
gaattctctctcatccttgctttctgtgaagagattaatggtaaaaatac
atgttgccagtagttgcatgtgttattgaaccttgacttgcattaaagga
tcgagacagtgacttttgttttctttacagggaagtcgagttgaaatcga
agcaatcgctgtccaggggcctttcatcaaggcatgactataagtagcca
tgctgatgttgactccggaggttttagaatgtctttcacactttaatttt
tacaaatgatgctgggaagtataaaaatgaccagagtggttgaagttatt
gtggaagtgatcaaatatgtggagatttgacattaattggagattattca
gtatagtgactgatgttctaatttcacttatgttgctgggtgtgagagaa
gaggtgcacagctactgagatgggaagcagaaggaaagatgggctgttgt
acatgagaaatagtaaggagcacatctacttaaatcatattaatttgctc
atgtgaaatacttagttcttatgttagatataagaaactaaattgaaata
ttcaaacttgaatagtaccaggagaacaagtggaccaaaatcttatacag
ataatattactttaattgaaataaaaaatagatgtgtaactttcccttgg
tttttaattttgttctcttattttttttaacagtttaattatacattaaa
actactacctaatagccaggcagtggtggcgcatgcctttaatcccagca
cttgggagacagaggcaggcgaatttctgagtttcagccagcctggtcta
cagagtgagttccaggacagccagggctacacagagaaaccctgtctcaa
aacaaaaacaaacaaaacaaaacaaacaaacaaatactacaatctagtaa
agggtgagtagaaattcttaagtatgggctagagagatggctcagaggtt
aatagaggttattagcactgactgctcttcagaggtcttaattccagagc
cacatggtgctgtcacatctatataggatctatgcctctctgcatgttag
gtgtactgcgatagatcactatatgctaaataaatcttaaagaaaatctc

ctgacaagccagggagtctggaagggtcatctagaatagtctcacacatc
tcttgttcaccttgtcctcttcaggtgtgttcagccatcatgcccacccc
ttttctgctttctcctctttgaggagcataaaatattctctgtgtctcat
gcccggtgattggctggggcctgggaagctgccagtgcctattttctatg
ggctggcttagccatgccagatgaattctgacaccaataaataaataaat
taattaactaattaaactaaagagcttttcttccttcaatttcacaagca
gtctttgtcagtcctgcccagcccagcataggcctggtattcccagactc
ctctcatcctgagggaagtgcctaggcttagggaaaaaaggaaggaccca
agcagagctctgcctagcactgtggcatcaaagagctcaaagcagaggct
acctgggctttgaacaggcaactaggtgcaggatagggaagtccactaaa
ggaaggacagaagcctagagtaaaggctcttaaattcaagagtgacaaat
ggatcagagagcaactcccagagtcctcggagactccaactctacaatcc
agtgtctccctttgtttgtcctttttcacaaaaagatgttgattttactt
tatgtgtatgcatgttttacctgaatgaacgtctgttcacagcatgtacc
acatacctgtggaggccagaaaggatgtcagatcttctggaactgaattt
atagatggttatgtgctgccacgttggttctaagacccaaacttgggtcc
tctgcaagaacaaccgtgctctttaatgctgagccatcattccagcttcc
tcttcctactctctcttcctcttactactcctcctcttactcttcctcct
cctcttactcctccccctcttacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_34413291_34414420
seq2: B6Ng01-101B06.b_47_1146 (reverse)

seq1  GAGATTTTTCTTTTTAAGATTTTATTTATGCATATAAGTGATCTATCTGC  50
      |||||||   | ||||||| |||||||| |||||| ||||||||||| ||
seq2  GAGATTT---TCTTTAAGA-TTTATTTA-GCATAT-AGTGATCTATC-GC  43

seq1  ATGTACACCTAACATGCCAGAAGAG-GGCATAAGATCCTATTATAGATGG  99
      | |||||||||||||||    |||| ||||| |||||||| |||||||| 
seq2  A-GTACACCTAACATGC----AGAGAGGCAT-AGATCCTA-TATAGATG-  85

seq1  TTGACAGCCACCATGTGGCTCCTGGGAATTGAAGACCTCTGGAAGAGCAG  149
       |||||| |||||||||||||   |||||| ||||||||| |||||||||
seq2  -TGACAG-CACCATGTGGCTC--TGGAATT-AAGACCTCT-GAAGAGCAG  129

seq1  TCAGTGCTATTAACCTCTATTAACCTCTGAGCCATCTCTCTAGCCCATAA  199
      ||||||||| |||||||||||||||||||||||||||||||||||||| |
seq2  TCAGTGCTAATAACCTCTATTAACCTCTGAGCCATCTCTCTAGCCCAT-A  178

seq1  CTTAAGAATTTCTACTCACCCTTTACTAGATTGTAGTATTTTGTTTTGTT  249
      ||||||||||||||||||||||||||||||||||||||      ||||||
seq2  CTTAAGAATTTCTACTCACCCTTTACTAGATTGTAGTA------TTTGTT  222

seq1  TTGTTTTTGTTTTGTTTTGTTT-TTTGTTTTTTGAGACAGGGTTTCTCTG  298
         | ||||||||||||||||| ||| | |||||||||||||||||||||
seq2  ---TGTTTGTTTTGTTTTGTTTGTTTTTGTTTTGAGACAGGGTTTCTCTG  269

seq1  TGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTGAA  348
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGG-CTGAA  318

seq1  ACTCAGAAATTCGCCTGCCTCTGTCTCCCAAGTGCTGGGATTAAAGGCAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAAATTCGCCTGCCTCTGTCTCCCAAGTGCTGGGATTAAAGGCAT  368

seq1  GCGCCACCACTGCCTGGCTATTAGGTAGTAGTTTTAATGTATAATTAAAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCACCACTGCCTGGCTATTAGGTAGTAGTTTTAATGTATAATTAAAC  418

seq1  TGTTAAAAAAAATAAGAGAACAAAATTAAAAACCAAGGGAAAGTTACACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAAAAAATAAGAGAACAAAATTAAAAACCAAGGGAAAGTTACACA  468

seq1  TCTATTTTTTATTTCAATTAAAGTAATATTATCTGTATAAGATTTTGGTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTTTATTTCAATTAAAGTAATATTATCTGTATAAGATTTTGGTC  518

seq1  CACTTGTTCTCCTGGTACTATTCAAGTTTGAATATTTCAATTTAGTTTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTTCTCCTGGTACTATTCAAGTTTGAATATTTCAATTTAGTTTCT  568

seq1  TATATCTAACATAAGAACTAAGTATTTCACATGAGCAAATTAATATGATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTAACATAAGAACTAAGTATTTCACATGAGCAAATTAATATGATT  618

seq1  TAAGTAGATGTGCTCCTTACTATTTCTCATGTACAACAGCCCATCTTTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGATGTGCTCCTTACTATTTCTCATGTACAACAGCCCATCTTTCC  668

seq1  TTCTGCTTCCCATCTCAGTAGCTGTGCACCTCTTCTCTCACACCCAGCAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTCCCATCTCAGTAGCTGTGCACCTCTTCTCTCACACCCAGCAA  718

seq1  CATAAGTGAAATTAGAACATCAGTCACTATACTGAATAATCTCCAATTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTGAAATTAGAACATCAGTCACTATACTGAATAATCTCCAATTAA  768

seq1  TGTCAAATCTCCACATATTTGATCACTTCCACAATAACTTCAACCACTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAATCTCCACATATTTGATCACTTCCACAATAACTTCAACCACTCT  818

seq1  GGTCATTTTTATACTTCCCAGCATCATTTGTAAAAATTAAAGTGTGAAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTTTTATACTTCCCAGCATCATTTGTAAAAATTAAAGTGTGAAAG  868

seq1  ACATTCTAAAACCTCCGGAGTCAACATCAGCATGGCTACTTATAGTCATG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTAAAACCTCCGGAGTCAACATCAGCATGGCTACTTATAGTCATG  918

seq1  CCTTGATGAAAGGCCCCTGGACAGCGATTGCTTCGATTTCAACTCGACTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATGAAAGGCCCCTGGACAGCGATTGCTTCGATTTCAACTCGACTT  968

seq1  CCCTGTAAAGAAAACAAAAGTCACTGTCTCGATCCTTTAATGCAAGTCAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTAAAGAAAACAAAAGTCACTGTCTCGATCCTTTAATGCAAGTCAA  1018

seq1  GGTTCAATAACACATGCAACTACTGGCAACATGTATTTTTACCATTAATC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAATAACACATGCAACTACTGGCAACATGTATTTTTACCATTAATC  1068

seq1  TCTTCACAGAAAGCAAGGATGAGAGAGAATTC  1130
      ||||||||||||||||||||||||||||||||
seq2  TCTTCACAGAAAGCAAGGATGAGAGAGAATTC  1100

seq1: chr15_34286823_34287747
seq2: B6Ng01-101B06.g_76_1000

seq1  CTGACAAGCCAGGGAGTCTGGAAGGGTCATCTAGAATAGTCTCACACATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAAGCCAGGGAGTCTGGAAGGGTCATCTAGAATAGTCTCACACATC  50

seq1  TCTTGTTCACCTTGTCCTCTTCAGGTGTGTTCAGCCATCATGCCCACCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTCACCTTGTCCTCTTCAGGTGTGTTCAGCCATCATGCCCACCCC  100

seq1  TTTTCTGCTTTCTCCTCTTTGAGGAGCATAAAATATTCTCTGTGTCTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCTTTCTCCTCTTTGAGGAGCATAAAATATTCTCTGTGTCTCAT  150

seq1  GCCCGGTGATTGGCTGGGGCCTGGGAAGCTGCCAGTGCCTATTTTCTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGGTGATTGGCTGGGGCCTGGGAAGCTGCCAGTGCCTATTTTCTATG  200

seq1  GGCTGGCTTAGCCATGCCAGATGAATTCTGACACCAATAAATAAATAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCTTAGCCATGCCAGATGAATTCTGACACCAATAAATAAATAAAT  250

seq1  TAATTAACTAATTAAACTAAAGAGCTTTTCTTCCTTCAATTTCACAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAACTAATTAAACTAAAGAGCTTTTCTTCCTTCAATTTCACAAGCA  300

seq1  GTCTTTGTCAGTCCTGCCCAGCCCAGCATAGGCCTGGTATTCCCAGACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGTCAGTCCTGCCCAGCCCAGCATAGGCCTGGTATTCCCAGACTC  350

seq1  CTCTCATCCTGAGGGAAGTGCCTAGGCTTAGGGAAAAAAGGAAGGACCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATCCTGAGGGAAGTGCCTAGGCTTAGGGAAAAAAGGAAGGACCCA  400

seq1  AGCAGAGCTCTGCCTAGCACTGTGGCATCAAAGAGCTCAAAGCAGAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGCTCTGCCTAGCACTGTGGCATCAAAGAGCTCAAAGCAGAGGCT  450

seq1  ACCTGGGCTTTGAACAGGCAACTAGGTGCAGGATAGGGAAGTCCACTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGCTTTGAACAGGCAACTAGGTGCAGGATAGGGAAGTCCACTAAA  500

seq1  GGAAGGACAGAAGCCTAGAGTAAAGGCTCTTAAATTCAAGAGTGACAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGACAGAAGCCTAGAGTAAAGGCTCTTAAATTCAAGAGTGACAAAT  550

seq1  GGATCAGAGAGCAACTCCCAGAGTCCTCGGAGACTCCAACTCTACAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGAGAGCAACTCCCAGAGTCCTCGGAGACTCCAACTCTACAATCC  600

seq1  AGTGTCTCCCTTTGTTTGTCCTTTTTCACAAAAAGATGTTGATTTTACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTCCCTTTGTTTGTCCTTTTTCACAAAAAGATGTTGATTTTACTT  650

seq1  TATGTGTATGCATGTTTTACCTGAATGAACGTCTGTTCACAGCATGTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTATGCATGTTTTACCTGAATGAACGTCTGTTCACAGCATGTACC  700

seq1  ACATACCTGTGGAGGCCAGAAAGGATGTCAGATCTTCTGGAACTGAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCTGTGGAGGCCAGAAAGGATGTCAGATCTTCTGGAACTGAATTT  750

seq1  ATAGATGGTTATGTGCTGCCACGTTGGTTCTAAGACCCAAACTTGGGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGGTTATGTGCTGCCACGTTGGTTCTAAGACCCAAACTTGGGTCC  800

seq1  TCTGCAAGAACAACCGTGCTC-TTAATGCTGAGCCATCATTCCAGCTTCC  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCTGCAAGAACAACCGTGCTCTTTAATGCTGAGCCATCATTCCAGCTTCC  850

seq1  TCTTCCTACTTCTCTCTTCCTCTTACTACTCCTCCTCTTACTCTTCCTCC  899
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTAC-TCTCTCTTCCTCTTACTACTCCTCCTCTTACTCTTCCTCC  899

seq1  TCCTCTTACTCCTCCCCCTCTTACTC  925
      |||||||||||||||||||||||| |
seq2  TCCTCTTACTCCTCCCCCTCTTACAC  925