BAC Information

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BAC

Clone NameB6Ng01-104D23
Chromosome15 (Build37)
Map Location 72,552,733 - 72,553,885
singlet/doubletsinglet
Overlap gene1810044A24Rik
Upstream geneLOC100040847, Col22a1, Kcnk9
Downstream geneLOC665621, Peg13, LOC100041120, Chrac1, Eif2c2, Ptk2, LOC666053, LOC100040929, Dennd3, Slc45a4, Gpr20, LOC100040946
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104D23.bB6Ng01-104D23.g
ACCDH912603DH912604
length1,1421,198
definitionDH912603|Mus musculus domesticus DNA, BAC clone: B6Ng01-104D23, 5' end.DH912604|Mus musculus domesticus DNA, BAC clone: B6Ng01-104D23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgccaactctaaactgggtctactgatataaactctttggggt
tcccagcttacttgtctgcctattgtggtggatgtatttatggtgttcag
cacacataaatgttgtggaacagattcgcttggtagtatgcatagaatct
gggttttctgaacccagcggtctcaggtgactcacatatccttgtcttaa
taataaagaagtgattatctgccccataataagacttgaactaggtacgt
gggattccctcattatgagaggacagacacaccatttggcaggcagtaac
agaagttgagagaagggaatagcatgtctgttgtagaagttgccttaggt
agctgttcactcttctgcagtgtttaccgaagctgccactctggtgctgt
ggactcagcagtgtgtgtgagatgggtctctgttccttgtgctataccag
ggtagattctagtgcagggatgcaaacatcaggaggtagaagatgcttag
aagatgatggaggagcgggaagtagtgtacaaccccacagtatagcactc
attcaacaccatatggatagcaagagtttgtgcagaagtacacacgctgt
ctaacaagtatggtttagctgtttgttcaaaagtgcggctctttggcttc
agagcctgggcatttcccttacctcacagctcctgggcctggcatggagc
cacatgaagacaactttgaggacattggttagagctcactcctatttcca
ctcttttttttcccctctgggtagatgtggctcatggccatccagggtat
tttggggaggatacagtggtttctttgcctgaggatgagacaacgctttc
tctccagggcctccttgtccccttacctttcaatgctctacatggatgct
cagttttccatgtggataaacataccttcttgccttaccacaagccaccc
atccacatctaacacatagccttgaaggcttggagctagaagaacatttc
cctcctgttaatcaatctcataaagtatttgaaacctctgatcagtcctg
acatcagatgctatatgtacttataatatggaaaacactaaatgtctgac
atctataggttgactgtagaatagctataaggaatgtgcttt
gaattccattagaggaagcagtactgaaatatataacttctgcttctact
ttaagaaatgaggagaagaactgagacccaaagtaaagtaggggagtaaa
taatgaacagcaaagtggaaatcaatgaaatagaaaacagaaaatctata
gaggaaatcaatgcaacccaagctggttcttcaaggagctcaacagaatt
aacaagcctccagctagaatgagcagagaggctgagaggagacatggatt
atcaatagagggacggatgcaatagagggatggatgcagtaacatggcta
cagtttctgtaatagtgaaggaaaataagggactgtcgtgaaaagcttta
tttcattggagttggcaacttagaccaaatatattctttgaaagacacat
tagcagagctgaccagagaaatggatgtcttgaatattctttattatgtg
ttactaaggaaaccaaatatgttgacaacctactgctgagacacatcaga
tccagatttacactgggaaattctcctaaaggttaaagagataaccctaa
tttctcataaaccctttcagaaaaaaggagttgaggaatgctccagcttt
attttgatgctaaaaattagacaggtaaaataaaattatagatactcctt
gaaggcacacattcttccatttttaaggaaatgtggccctacatatacat
aaaaatgatgctgtttcatttctacagatgctgatcttaggaatgcaagg
ctggttgagcatctggaaatcaatcaaggtgactcaccatggtcacaaat
taagagagagaaaccttatcatcatcagaatctaggcagaaaaggcctgt
gacgtgtaaatggacgctcatttctcataagagcgccacacaccagtaat
cccaggagaatggctaagactgggtaaggggcagtgatggaaacctacca
gcacacacactgggtaaaggactcagtgcttctctctgaggccaggcagt
ggggagaggctggtgctcacactgctatgcaaacagcacgggtatggtaa
gggaagatgagccaccacaggtgcatgaccggaaagaggtgaatgtcctt
atctactgtacatgattatgacttctgggaaatcatgaatcagaaagcag
ctccttgaaattactggcaccatagggggggctattagtggcgaccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_72552733_72553885
seq2: B6Ng01-104D23.b_44_1185 (reverse)

seq1  AAAGCACAATTTTCTTAATAGCTATCTAACAGTCAACTAATAGATGTCAG  50
      ||||||||   ||| | ||||||||   |||||||||  |||||||||||
seq2  AAAGCACA---TTCCTTATAGCTATTCTACAGTCAACCTATAGATGTCAG  47

seq1  ACATTTTAGTTGTTTTCATATTATAAGTAACATATAAGCATCCTGATGTC  100
      ||| ||||||  ||| |||||||||||| |||||| ||||| ||||||| 
seq2  ACA-TTTAGTGTTTTCCATATTATAAGT-ACATAT-AGCAT-CTGATGT-  92

seq1  CAGGACTTGATCAGAGGTTTCAAATACTTTTATGAGAATTGATTAACAGG  150
      |||||| |||||||||||||||||||| |||||||| |||||||||||||
seq2  CAGGAC-TGATCAGAGGTTTCAAATAC-TTTATGAG-ATTGATTAACAGG  139

seq1  AGGGAATTGTTC-TCTAGCTCCAAGCCTTCAAGGCTATGTGTTAGATGTG  199
      |||||| ||||| |||||||||||||||||||||||||||||||||||||
seq2  AGGGAAATGTTCTTCTAGCTCCAAGCCTTCAAGGCTATGTGTTAGATGTG  189

seq1  GATGGGTGGCCTTGTGGTAAGGCAAGAAGGTATGTTTATCCACATGGAAA  249
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTGG-CTTGTGGTAAGGCAAGAAGGTATGTTTATCCACATGGAAA  238

seq1  ACTGAGCATCCATGTAGAGCATTGAAAGGTAAGGGGACAAGGAGGCCCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCATCCATGTAGAGCATTGAAAGGTAAGGGGACAAGGAGGCCCTG  288

seq1  GAGAGAAAGCGTTGTCTCATCCTCAGGCAAAGAAACCACTGTATCCTCCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAGCGTTGTCTCATCCTCAGGCAAAGAAACCACTGTATCCTCCC  338

seq1  CAAAATACCCTGGATGGCCATGAGCCACATCTACCCAGAGGGGAAAAAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATACCCTGGATGGCCATGAGCCACATCTACCCAGAGGGGAAAAAAA  388

seq1  AGAGTGGAAATAGGAGTGAGCTCTAACCAATGTCCTCAAAGTTGTCTTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGAAATAGGAGTGAGCTCTAACCAATGTCCTCAAAGTTGTCTTCA  438

seq1  TGTGGCTCCATGCCAGGCCCAGGAGCTGTGAGGTAAGGGAAATGCCCAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTCCATGCCAGGCCCAGGAGCTGTGAGGTAAGGGAAATGCCCAGG  488

seq1  CTCTGAAGCCAAAGAGCCGCACTTTTGAACAAACAGCTAAACCATACTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAGCCAAAGAGCCGCACTTTTGAACAAACAGCTAAACCATACTTG  538

seq1  TTAGACAGCGTGTGTACTTCTGCACAAACTCTTGCTATCCATATGGTGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACAGCGTGTGTACTTCTGCACAAACTCTTGCTATCCATATGGTGTT  588

seq1  GAATGAGTGCTATACTGTGGGGTTGTACACTACTTCCCGCTCCTCCATCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGTGCTATACTGTGGGGTTGTACACTACTTCCCGCTCCTCCATCA  638

seq1  TCTTCTAAGCATCTTCTACCTCCTGATGTTTGCATCCCTGCACTAGAATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAAGCATCTTCTACCTCCTGATGTTTGCATCCCTGCACTAGAATC  688

seq1  TACCCTGGTATAGCACAAGGAACAGAGACCCATCTCACACACACTGCTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTGGTATAGCACAAGGAACAGAGACCCATCTCACACACACTGCTGA  738

seq1  GTCCACAGCACCAGAGTGGCAGCTTCGGTAAACACTGCAGAAGAGTGAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACAGCACCAGAGTGGCAGCTTCGGTAAACACTGCAGAAGAGTGAAC  788

seq1  AGCTACCTAAGGCAACTTCTACAACAGACATGCTATTCCCTTCTCTCAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACCTAAGGCAACTTCTACAACAGACATGCTATTCCCTTCTCTCAAC  838

seq1  TTCTGTTACTGCCTGCCAAATGGTGTGTCTGTCCTCTCATAATGAGGGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTACTGCCTGCCAAATGGTGTGTCTGTCCTCTCATAATGAGGGAA  888

seq1  TCCCACGTACCTAGTTCAAGTCTTATTATGGGGCAGATAATCACTTCTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACGTACCTAGTTCAAGTCTTATTATGGGGCAGATAATCACTTCTTT  938

seq1  ATTATTAAGACAAGGATATGTGAGTCACCTGAGACCGCTGGGTTCAGAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAAGACAAGGATATGTGAGTCACCTGAGACCGCTGGGTTCAGAAA  988

seq1  ACCCAGATTCTATGCATACTACCAAGCGAATCTGTTCCACAACATTTATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGATTCTATGCATACTACCAAGCGAATCTGTTCCACAACATTTATG  1038

seq1  TGTGCTGAACACCATAAATACATCCACCACAATAGGCAGACAAGTAAGCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGAACACCATAAATACATCCACCACAATAGGCAGACAAGTAAGCT  1088

seq1  GGGAACCCCAAAGAGTTTATATCAGTAGACCCAGTTTAGAGTTGGCAAGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACCCCAAAGAGTTTATATCAGTAGACCCAGTTTAGAGTTGGCAAGA  1138

seq1  ATTC  1153
      ||||
seq2  ATTC  1142