BAC Information

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BAC

Clone NameB6Ng01-106D23
Chromosome15 (Build37)
Map Location 67,222,787 - 67,372,781
singlet/doubletdoublet
Overlap genenone
Upstream geneLrrc6, Tmem71, LOC100040881, Phf20l1, Tg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
Downstream geneZfat1, LOC100041000
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106D23.bB6Ng01-106D23.g
ACCDH914038DH914039
length1,0741,115
definitionDH914038|Mus musculus domesticus DNA, BAC clone: B6Ng01-106D23, 5' end.DH914039|Mus musculus domesticus DNA, BAC clone: B6Ng01-106D23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,222,787 - 67,223,858)(67,371,900 - 67,372,781)
sequence
gaattcttgcctaagatgaacaacatcctaggtttgatcccaagaaccac
attaaactgagtatagtggcacatacactaatcctagcatctaggaagtg
gagatgagaggatcagaggttcaaggttacagctacatagtgagttagat
gacattctgagttagatcctttataaagcaacaaaatttttaaaagaaag
aaaaataagaaaaaaaaggaaaaaagaaaaatatgtttgatgtgtaaagt
actatgacatcctatctgtccctatatcctttagatagtcatgtgaacaa
gaattatttttcatggtattggagatatggatggttcccaagcttacatt
aggattacttctctatgatctcatctatcctatgtcaaacaccaggaggt
ggagattgccatttacagggaaggctcagggatgtgaagtcatgcattta
aacccctgtgcctaggaagaagcattataaaaccctaaacaccaatcctc
ccagctttgtctcttttgtcaaccttgagcttgctattggttctgtatat
ggccttagtgtagaagttctaccttgccgggcgtggtggcgcactccttt
aatcccagcacttgggaggcagaggcaggtggatttctgagtttgaggcc
agcctggtctataaagtgagttccaggacagtcagggctatatagagaaa
ccctgtctcgaaaaacaaaaacaaacaaacaaacaaacaacaacaacaaa
aaaagttctatcttttccgtacacctctatccaagccacagttttcattt
gtaaacaggatcggccgcatggactctgacattgtggaattaacagatgt
gagtagtgagaactgctgccaagtatatgtcttcttttccagtcatcagt
tttgggacaccttctaaaaaatgggattattccaaggaaatattctcagt
tattcttaggacgattcccataaggttgaaggggagggcaatgagttgga
tttctaggaacagatgcccatattgactgccaagaccatcataggaaagt
tccagaggtgtgtgtgtgtgtgtg
gaattccttggtgatgaacagcagtatggaagtgtaaggtgaataaaccc
tttcctctccaacttgtttcctggttgtgatgtttgtgcaggaatagaaa
ccctgactaagacagatcccatgaagggttttggggtgttaactgcatcc
cagcagctttactgcattgagactataaaaattagattttgtataccttg
ggaaagaaaattactggtacagatttccatgggtctatataactacatgg
catctccaggcaagatggcaccagccataaagggcaattttaaggtgaag
attataagttgagagttcagtagcaatttctaaagcctacatttgcacac
tagtggcagctacatactcttcttattcacctgtatgttcccagactcct
ggttgatgaaacttaactcatgaattaaaaaagaatgggatgcctttttg
gcactggtcaatgaatgctctttcctggggaagtccatctgccctgttgc
tagctttgtgtgtgactgaggcattgtgggctttcctctgaccagtatgg
catggtcattagtgccattatgatttaactcacactttggtagtcatata
tgcatgtgattgcaggtttttggttttttttttttttttaaaggagacca
tggatttgaaggagagttgggagagagacatgagaaggtttggatataag
aaaagtaatgttgaaatgttgtaattaaattataatctcaaaattgaaac
aataaaaataaaaatgagagagagagagagagagagagagagagaagaag
aagagaagaggggtgattgagatcaagtaaacagttttcatgtattaagt
gctcagtgacatgtgttgagctggatttcccttccccacttatcccagac
attttggcgctttgcaaaattgaatctgtcagcaatagttgagatttatc
atcactaggaaatagttttcagtgaagtcatcattgcctaagagtggcgt
gacagatactgatttatgtctatgcactatcatttactcacctgactaaa
ggagttgggagaaggtgagattcaaccatggtctgagtgagctgtcgacc
tcctaagatacttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_67222787_67223858
seq2: B6Ng01-106D23.b_44_1117

seq1  GAATTCTTGCCTAAGATGAACAACATCCTAGGTTTGATCCCAAGAACCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCCTAAGATGAACAACATCCTAGGTTTGATCCCAAGAACCAC  50

seq1  ATTAAACTGAGTATAGTGGCACATACACTAATCCTAGCATCTAGGAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACTGAGTATAGTGGCACATACACTAATCCTAGCATCTAGGAAGTG  100

seq1  GAGATGAGAGGATCAGAGGTTCAAGGTTACAGCTACATAGTGAGTTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAGAGGATCAGAGGTTCAAGGTTACAGCTACATAGTGAGTTAGAT  150

seq1  GACATTCTGAGTTAGATCCTTTATAAAGCAACAAAATTTTTAAAAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCTGAGTTAGATCCTTTATAAAGCAACAAAATTTTTAAAAGAAAG  200

seq1  AAAAATAAGAAAAAAAAGGAAAAAAGAAAAATATGTTTGATGTGTAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAGAAAAAAAAGGAAAAAAGAAAAATATGTTTGATGTGTAAAGT  250

seq1  ACTATGACATCCTATCTGTCCCTATATCCTTTAGATAGTCATGTGAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGACATCCTATCTGTCCCTATATCCTTTAGATAGTCATGTGAACAA  300

seq1  GAATTATTTTTCATGGTATTGGAGATATGGATGGTTCCCAAGCTTACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATTTTTCATGGTATTGGAGATATGGATGGTTCCCAAGCTTACATT  350

seq1  AGGATTACTTCTCTATGATCTCATCTATCCTATGTCAAACACCAGGAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTACTTCTCTATGATCTCATCTATCCTATGTCAAACACCAGGAGGT  400

seq1  GGAGATTGCCATTTACAGGGAAGGCTCAGGGATGTGAAGTCATGCATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTGCCATTTACAGGGAAGGCTCAGGGATGTGAAGTCATGCATTTA  450

seq1  AACCCCTGTGCCTAGGAAGAAGCATTATAAAACCCTAAACACCAATCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTGTGCCTAGGAAGAAGCATTATAAAACCCTAAACACCAATCCTC  500

seq1  CCAGCTTTGTCTCTTTTGTCAACCTTGAGCTTGCTATTGGTTCTGTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTTGTCTCTTTTGTCAACCTTGAGCTTGCTATTGGTTCTGTATAT  550

seq1  GGCCTTAGTGTAGAAGTTCTACCTTGCCGGGCGTGGTGGCGCACTCCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTAGTGTAGAAGTTCTACCTTGCCGGGCGTGGTGGCGCACTCCTTT  600

seq1  AATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCC  650

seq1  AGCCTGGTCTATAAAGTGAGTTCCAGGACAGTCAGGGCTATATAGAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTCTATAAAGTGAGTTCCAGGACAGTCAGGGCTATATAGAGAAA  700

seq1  CCCTGTCTCGAAAAACAAAAACAAACAAACAAACAAACAACAACAACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCGAAAAACAAAAACAAACAAACAAACAAACAACAACAACAAA  750

seq1  AAAAGTTCTATCTTTTCCGTACACCTCTATCCAAGCCACAGTTTTCATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCTATCTTTTCCGTACACCTCTATCCAAGCCACAGTTTTCATTT  800

seq1  GTAAACAGGATCGGCCGCATGGACTCTGACATTGTGGAATTAACAGATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAGGATCGGCCGCATGGACTCTGACATTGTGGAATTAACAGATGT  850

seq1  GAGTAGTGAGAACTGCTGCCAAGTATATGTCTTCTTTTCCAGTCATCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTGAGAACTGCTGCCAAGTATATGTCTTCTTTTCCAGTCATCAGT  900

seq1  TTT-GGACACCTTCTAAAAAATGGGATTATTCCAAGGAAATATTCTCAGT  949
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGACACCTTCTAAAAAATGGGATTATTCCAAGGAAATATTCTCAGT  950

seq1  TATTCTTA-GACGATTCCCATAAGGTTGAAGGGGAGGGCAATGAGTTGGA  998
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTAGGACGATTCCCATAAGGTTGAAGGGGAGGGCAATGAGTTGGA  1000

seq1  TTTCTAGGAACAGATG-CCATATTGACTGCCAAGACCATCATAAGAAAGT  1047
      |||||||||||||||| |||||||||||||||||||||||||| ||||||
seq2  TTTCTAGGAACAGATGCCCATATTGACTGCCAAGACCATCATAGGAAAGT  1050

seq1  TCCAAGAGGTGTGTGTGTGTGTGTG  1072
      ||| |||||||||||||||||||||
seq2  TCC-AGAGGTGTGTGTGTGTGTGTG  1074

seq1: chr15_67371900_67372781
seq2: B6Ng01-106D23.g_311_1181 (reverse)

seq1  GGAAGTTATC-TAGGAGGTAGACAGACCTCA-TCAGACCCATGGTTGAAT  48
      ||||| |||| |||||||| |||||  |||| ||||| ||||||||||||
seq2  GGAAG-TATCTTAGGAGGTCGACAG--CTCACTCAGA-CCATGGTTGAAT  46

seq1  CTCACTTTCTCCCAAACTCCCTCTAGGTCA-GTGAGTAAATTGTAGTGCA  97
      ||||| ||||||| |||| ||| || |||| ||||||||||  |||||||
seq2  CTCACCTTCTCCC-AACT-CCTTTA-GTCAGGTGAGTAAATGATAGTGCA  93

seq1  TTAGACACTAAATCAGTATCTGTCACG-CACTCTTAGGCAAATGATGACT  146
       |||||| ||||||||||||||||||| ||||||||||| ||||||||||
seq2  -TAGACA-TAAATCAGTATCTGTCACGCCACTCTTAGGC-AATGATGACT  140

seq1  TCCACTGAAAACTATTTCCTTAGTGATGATAAATCTTCAACTATTGCTGA  196
      | ||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  T-CACTGAAAACTATTTCC-TAGTGATGATAAATC-TCAACTATTGCTGA  187

seq1  CAGATTCAATTTTTGCAAAGCGCCAAAATGTCTGGGATAAGTGGGGAAGG  246
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCAA-TTTTGCAAAGCGCCAAAATGTCTGGGATAAGTGGGGAAGG  236

seq1  GAAATCCAGCTCAACACATGTCACTGAGCACTTAATACATGAAAACTGTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCAGCTCAACACATGTCACTGAGCACTTAATACATGAAAACTGTT  286

seq1  TACTTGATCTCAATCACCCCTCTTCTTCTTCTTCTTCTCTCTCTCTCTCT  346
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TACTTGATCTCAATCACCCCTCTTC-TCTTCTTCTTCTCTCTCTCTCTCT  335

seq1  CTCTCTCTCTCTCTCATTTTTATTTTTATTGTTTCAATTTTGAGATTATA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCATTTTTATTTTTATTGTTTCAATTTTGAGATTATA  385

seq1  ATTTAATTACAACATTTCAACATTACTTTTCTTATATCCAAACCTTCTCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTACAACATTTCAACATTACTTTTCTTATATCCAAACCTTCTCA  435

seq1  TGTCTCTCTCCCAACTCTCCTTCAAATCCATGGTCTCCTTTAAAAAAAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCTCCCAACTCTCCTTCAAATCCATGGTCTCCTTTAAAAAAAAA  485

seq1  AAAAAAACCAAAAACCTGCAATCACATGCATATATGACTACCAAAGTGTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACCAAAAACCTGCAATCACATGCATATATGACTACCAAAGTGTG  535

seq1  AGTTAAATCATAATGGCACTAATGACCATGCCATACTGGTCAGAGGAAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAATCATAATGGCACTAATGACCATGCCATACTGGTCAGAGGAAAG  585

seq1  CCCACAATGCCTCAGTCACACACAAAGCTAGCAACAGGGCAGATGGACTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAATGCCTCAGTCACACACAAAGCTAGCAACAGGGCAGATGGACTT  635

seq1  CCCCAGGAAAGAGCATTCATTGACCAGTGCCAAAAAGGCATCCCATTCTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGAAAGAGCATTCATTGACCAGTGCCAAAAAGGCATCCCATTCTT  685

seq1  TTTTAATTCATGAGTTAAGTTTCATCAACCAGGAGTCTGGGAACATACAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTCATGAGTTAAGTTTCATCAACCAGGAGTCTGGGAACATACAG  735

seq1  GTGAATAAGAAGAGTATGTAGCTGCCACTAGTGTGCAAATGTAGGCTTTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATAAGAAGAGTATGTAGCTGCCACTAGTGTGCAAATGTAGGCTTTA  785

seq1  GAAATTGCTACTGAACTCTCAACTTATAATCTTCACCTTAAAATTGCCCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGCTACTGAACTCTCAACTTATAATCTTCACCTTAAAATTGCCCT  835

seq1  TTATGGCTGGTGCCATCTTGCCTGGAGATGCCATGT  882
      ||||||||||||||||||||||||||||||||||||
seq2  TTATGGCTGGTGCCATCTTGCCTGGAGATGCCATGT  871