BAC Information

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BAC

Clone NameB6Ng01-106F15
Chromosome15 (Build37)
Map Location 49,861,606 - 49,862,579
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039600, LOC100039539, LOC665160
Downstream geneTrps1, LOC100039644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106F15.bB6Ng01-106F15.g
ACCDH914118DH914119
length1,0981,137
definitionDH914118|Mus musculus domesticus DNA, BAC clone: B6Ng01-106F15, 5' end.DH914119|Mus musculus domesticus DNA, BAC clone: B6Ng01-106F15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttgggatatgggaggaaagattttaggagtcatagtggacaag
aataccataagaacgtgacccatagcattaactaaccaggactcattggg
gctcacagagactggactgaaatatcagaaaaccaggataggtctgaact
aagtcatggttgtgtagcttcgtgttcttgtgggagtcctaagagtagaa
aaggggactatatgattcttttgcttgctttgggaccttttcttccttct
gggtagctgtctgaacttgaaatgctatgttcggttgatatctctgggag
gcctggaatttcatgaaagaaatacaagaaggatctaggtaaaaagggag
attggacaggagggaacaaacatacacaccacacacacacacacacacac
acacacacacacacacacacacacacacacatacacacacacacacacac
acacacacacacacacacacacacacacacgtggaatagaggagagtgga
gaaaactgtgtttgggtttagataattaaatagataaatgatatgtagat
agatagatagatagatagatagatagatagatagatagatagatagataa
tagacagacatatatagaaagatagatgatagaattttttaaactaagaa
tatgcctttgaaaatgaagattacagaagaaatctatttgcatgcagttc
aatggaacctttattcattttataaagatagctataattcaaccaaaaat
attgtcttttgtcttacatcttgtgaacgaagtttgacaaaaaaagtgac
ttaaaaaactaaaagaagtaatcatgaggaaaagggctatccagtaaata
aatgatgagataatggtttattctaagccaaatatcagtgaatgtagccc
taaaacatggattgaagagcactgacttatcactttactaactcattttg
tttgtcttcagacatattttctctgtgatccttggctggtccagatctca
ctctgtctaccaaggatcacctcaaactcacagggaatctgctgcttcga
ctgctgtctaaggaataaaggcatgcaacgacctactgaatttctcct
gaattcttagattcggttagcaagtatttaattgaggatttttgcattga
tattcataatggaaattggtctgaagttctctatctttgttgggtctttc
tgtggtttaggtatcagagtaattgtggcttcatagaatgagttgggtag
agtaccttctgcttctattttgtggaatagtttgtgaagaactggaatta
gatcttctttgaaggtctgataaaactttgcacaaactcatctgatcctg
ggctttttttttttttttggttgggagactattaaggactgcttctattt
ctttaggggatgtaggactgttttgatcattaacttgatcctgatttaac
tttggtacctggtatctgtctagaaatttgtccatttcatccaggttttc
cagttttgttgagtatagccttttgtagaaggatctgatggtgttttgga
tttcttaagtatctgttgttatgtttcccttttcatttctgattttgtta
attagaatgctgtccctgtgccctctagtgagtctggctaagggttttta
tctattctgttgattttctcaaagaaccaactccgcatttggttaattct
ttgaatagttcttcttgtttccacttggtcaaattcgcccctgagtttga
ttatttcctgccatctactcctcttgggtgtatttgctttcttttgtttt
agagcttttaggtgtgttgtcaagttgctagtgtgtgctctctctagttt
ctttttgggagcactcagcgctatgagttttcctcttagaatgctttcat
tgtgtcccataattttgggtatgttgtggcttcattttcattaaacacta
aaaagtctttaattttctttcttttattctttcctttgatgaggatttca
ttgaaaagagtgttgttcagtttccacatgaatgtgactttctattattt
tgttgttaatgaagatcaccttagtccatggtgatctgatagatgcatgg
gataatttcatatttttgatctggtcagcctgttttggaccaatatatgt
caattttggagacggccatgagtcctgagagaggacatccttttgtttag
aaaagtgtcggagaagatcctgtagaccatttggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_49861606_49862579
seq2: B6Ng01-106F15.b_175_1139

seq1  CAGGATAGGTCTGAACTAAGTCATGGTTGTGTAGCTTCGTGTTCTTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATAGGTCTGAACTAAGTCATGGTTGTGTAGCTTCGTGTTCTTGTGG  50

seq1  GAGTCCTAAGAGTAGAAAAGGGGACTATATGATTCTTTTGCTTGCTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTAAGAGTAGAAAAGGGGACTATATGATTCTTTTGCTTGCTTTGG  100

seq1  GACCTTTTCTTCCTTCTGGGTAGCTGTCTGAACTTGAAATGCTATGTTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTTCTTCCTTCTGGGTAGCTGTCTGAACTTGAAATGCTATGTTCG  150

seq1  GTTGATATCTCTGGGAGGCCTGGAATTTCATGAAAGAAATACAAGAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATATCTCTGGGAGGCCTGGAATTTCATGAAAGAAATACAAGAAGGA  200

seq1  TCTAGGTAAAAAGGGAGATTGGACAGGAGGGAACAAACATACACACCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGTAAAAAGGGAGATTGGACAGGAGGGAACAAACATACACACCACA  250

seq1  CACACACACACACACACACACACACACACACACACACACACACACACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACACACACATA  300

seq1  CACACACACACACACACACACACACACACACACACACACACACACACGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACACACACGTG  350

seq1  GAATAGAGGAGAGTGGAGAAAACTGTGTTTGGGTTTAGATAATTAAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAGGAGAGTGGAGAAAACTGTGTTTGGGTTTAGATAATTAAATAG  400

seq1  ATAAATGATATGTAGATAGATAGATAGATAGATAGATAGATAGATAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGATATGTAGATAGATAGATAGATAGATAGATAGATAGATAGATA  450

seq1  GATAGATAGATAGATAATAGACAGACATATATAGAAAGATAGATGATAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAGATAGATAATAGACAGACATATATAGAAAGATAGATGATAGA  500

seq1  ATTTTTTAAACTAAGAATATGCCTTTGAAAATGAAGATTACAGAAGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAAACTAAGAATATGCCTTTGAAAATGAAGATTACAGAAGAAAT  550

seq1  CTATTTGCATGCAGTTCAATGGAACCTTTATTCATTTTATAAAAGATAGC  600
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTATTTGCATGCAGTTCAATGGAACCTTTATTCATTTTAT-AAAGATAGC  599

seq1  TATAATTCAACCAAAAATATTGTCTTTTGTCTTACATCTTGTGAACGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTCAACCAAAAATATTGTCTTTTGTCTTACATCTTGTGAACGAAG  649

seq1  TTTGACAAAAAAAGTGACTTAAAAAACTAAAAGAAGTAATCATGAGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACAAAAAAAGTGACTTAAAAAACTAAAAGAAGTAATCATGAGGAAA  699

seq1  AGGGCTATCCAGTAAATAAATGATGAGATAATGGTTTATTCTAAGCCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTATCCAGTAAATAAATGATGAGATAATGGTTTATTCTAAGCCAAA  749

seq1  TATCAGTGAATGTAGCCCTAAAACATGGATTGAAGGAGCACTGACTTATT  800
      |||||||||||||||||||||||||||||||||| ||||||||||||| |
seq2  TATCAGTGAATGTAGCCCTAAAACATGGATTGAA-GAGCACTGACTTA-T  797

seq1  CACTTTACTAACTCATTTTGTTTGTTCTTCAAGACAATATTTCTCTGTGT  850
      |||||||||||||||||||||||| ||||| |||||   |||||||||| 
seq2  CACTTTACTAACTCATTTTGTTTG-TCTTC-AGACATATTTTCTCTGTG-  844

seq1  ATCCTTGGCTGTTCCAGATCTCACTCTGTCTACCAA-GATCACCTCAAAC  899
      ||||||||||| |||||||||||||||||||||||| |||||||||||||
seq2  ATCCTTGGCTGGTCCAGATCTCACTCTGTCTACCAAGGATCACCTCAAAC  894

seq1  TCACAGGG-ATCTGCCTGCTTCTGACTGCTGTGTCTTAGGATTAAAGGCA  948
      |||||||| ||||| ||||||| ||||||  ||||| |||| ||||||||
seq2  TCACAGGGAATCTG-CTGCTTC-GACTGC--TGTCTAAGGAATAAAGGCA  940

seq1  TGCAACGACACTACCTGATTTCTCCT  974
      ||||||||| ||||   |||||||||
seq2  TGCAACGAC-CTACTGAATTTCTCCT  965