BAC Information

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BAC

Clone NameB6Ng01-108B16
Chromosome15 (Build37)
Map Location 69,531,034 - 69,676,475
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665945, EG633752, Khdrbs3
Downstream geneLOC383050
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108B16.bB6Ng01-108B16.g
ACCDH915376DH915377
length1,175979
definitionDH915376|Mus musculus domesticus DNA, BAC clone: B6Ng01-108B16, 5' end.DH915377|Mus musculus domesticus DNA, BAC clone: B6Ng01-108B16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,531,034 - 69,532,227)(69,675,876 - 69,676,475)
sequence
gaattcactatgtagacaaggctgccttgaacttacagagatctatcttc
cctctgcctcccaagtactgggattaaaggtttgtgtcatcgcatccaac
catatatttctttcttatttgtacgagagactaattttttagaaaataga
ctcttctctaatacagtgtatcccaaacaattttccctccctctacttct
cctaatctctcccacctctcctctcccccagatcctctcctactcagctg
tttaaaaaaagagattataacattttcaggaaaatggatgcaactataga
gatgaaaatgttataccttgcacagcttattctcccttttctgttttctg
attttcttagctttaaaatcgctttattgttcctttacttacagacaagt
gctctgtaactcatgagattacacatagaacctttccttttgtatgattc
tgagacaaaatataagtttcatattggactaactacattactctatgtac
cttaggtaatagcagccactttctagtgttatcaaagggaaatcaattaa
gatttgtgatatgaactccataaaagctatcagacaagtgatgatagaga
atggggtaatgggcctacattagggcataatggtgctgctggtggtgatt
atgatgaagatgatgatgataatgacaatgatgctgctgatgttcacaat
aaacatagtattaatagtggagagacagttaaagcagttaaagtgagaaa
ccatattgctttagcagggacaggctgtgcaaacaaaaataactaggttt
aaacctgagcattagttattagttgaacaaatttgaatgaagtattaaat
ttcctaaaattgatctcattctccatgaaatagtgaatgacaataatcta
aactatgcatatatgttttgataattaagaatattaagtccagttatagc
ttgcagtctgactagtgtggattcagatatattcatgcaggtaggaaata
gagcactgtaactcctgccttgagatggctgagattatgaacactattct
gatcataaaatgaactttcttatgaggcaaaaagtcaggacagtgctctt
ttcatgatggcgactaggccatttcgatcatatggcagctagaaaccgaa
gcctctgggggggggaactttttag
gaattctattaccaccttttctataaaactgactctttcttatttaaatg
atcaaaaattattgaatgtgtagtattgtatctttgctatctcctatatg
gtgtgaatgagagtccctgaatgaataccatgtcagaaaagaaataactg
ggtgcttgtttagaacctcagtgatggaaaaaagcttggaatgttgcaag
tccagagtaattactatttatcttggactctccttaacatattacatagt
ctttccttgccttattaaatgtcagacctagcactctttgaataccagat
aaagatggacctaatagcctgacagataaaatatttggaatgtattatcc
tgacaaattcctattttttctgccactgaacaaagccaatcctgctgtca
gatagcatctaagggctataggagagttttcctcatcacatgataacctg
cctacctaaaatgccttcaatgtatttgaaaggtatcttgatttatttgg
ttgctataaagagttcatgaaattgctacctcattgaaacagataatttg
aggtgatctccatctgtgttcttgggctgtgatcactcatattttgttcc
agaatgaactcactctcttacccttgtgaggcctgaggtgcggttgtgat
tggacagagatgcccacagggcagaaaacagaaaaaaaaaatgcatagct
acaacatcatgatgcaaacaagaacagacacacacacacacattcacaca
catacacaatcacaccagggttattaaccataaaatgatatctctaacaa
tgaccaagaaatacaaggcattagttaattagaatacatttcataggatg
ttcagggttttgggttgcacatttgcatctttcaaacgtgtaattatggt
agatatataccctgtactggagttttacataaacacttgtggtctagttc
agattatctctactgcatgcagcagctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_69531034_69532227
seq2: B6Ng01-108B16.b_43_1217

seq1  GAATTCACTATGTAGACAAGGCTGCCTTGAACTTACAGAGATCTATCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGACAAGGCTGCCTTGAACTTACAGAGATCTATCTTC  50

seq1  CCTCTGCCTCCCAAGTACTGGGATTAAAGGTTTGTGTCATCGCATCCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTCCCAAGTACTGGGATTAAAGGTTTGTGTCATCGCATCCAAC  100

seq1  CATATATTTCTTTCTTATTTGTACGAGAGACTAATTTTTTAGAAAATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATTTCTTTCTTATTTGTACGAGAGACTAATTTTTTAGAAAATAGA  150

seq1  CTCTTCTCTAATACAGTGTATCCCAAACAATTTTCCCTCCCTCTACTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCTAATACAGTGTATCCCAAACAATTTTCCCTCCCTCTACTTCT  200

seq1  CCTAATCTCTCCCACCTCTCCTCTCCCCCAGATCCTCTCCTACTCAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATCTCTCCCACCTCTCCTCTCCCCCAGATCCTCTCCTACTCAGCTG  250

seq1  TTTAAAAAAAGAGATTATAACATTTTCAGGAAAATGGATGCAACTATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAAGAGATTATAACATTTTCAGGAAAATGGATGCAACTATAGA  300

seq1  GATGAAAATGTTATACCTTGCACAGCTTATTCTCCCTTTTCTGTTTTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAATGTTATACCTTGCACAGCTTATTCTCCCTTTTCTGTTTTCTG  350

seq1  ATTTTCTTAGCTTTAAAATCGCTTTATTGTTCCTTTACTTACAGACAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTAGCTTTAAAATCGCTTTATTGTTCCTTTACTTACAGACAAGT  400

seq1  GCTCTGTAACTCATGAGATTACACATAGAACCTTTCCTTTTGTATGATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTAACTCATGAGATTACACATAGAACCTTTCCTTTTGTATGATTC  450

seq1  TGAGACAAAATATAAGTTTCATATTGGACTAACTACATTACTCTATGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAAAATATAAGTTTCATATTGGACTAACTACATTACTCTATGTAC  500

seq1  CTTAGGTAATAGCAGCCACTTTCTAGTGTTATCAAAGGGAAATCAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTAATAGCAGCCACTTTCTAGTGTTATCAAAGGGAAATCAATTAA  550

seq1  GATTTGTGATATGAACTCCATAAAAGCTATCAGACAAGTGATGATAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTGATATGAACTCCATAAAAGCTATCAGACAAGTGATGATAGAGA  600

seq1  ATGGGGTAATGGGCCTACATTAGGGCATAATGGTGCTGCTGGTGGTGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTAATGGGCCTACATTAGGGCATAATGGTGCTGCTGGTGGTGATT  650

seq1  ATGATGAAGATGATGATGATAATGACAATGATGCTGCTGATGTTCACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAAGATGATGATGATAATGACAATGATGCTGCTGATGTTCACAAT  700

seq1  AAACATAGTATTAATAGTGGAGAGACAGTTAAAGCAGTTAAAGTGAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGTATTAATAGTGGAGAGACAGTTAAAGCAGTTAAAGTGAGAAA  750

seq1  CCATATTGCTTTAGCAGGGACAGGCTGTGCAAACAAAAATAACTAGGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTGCTTTAGCAGGGACAGGCTGTGCAAACAAAAATAACTAGGTTT  800

seq1  AAACCTGAGCATTAGTTATTAGTTGAACAAATTTGAATGAAGTATTAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGAGCATTAGTTATTAGTTGAACAAATTTGAATGAAGTATTAAAT  850

seq1  TTCCTAAAATTGATCTCATTCTCCATGAAATAGTGAATGACAATAATCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAAATTGATCTCATTCTCCATGAAATAGTGAATGACAATAATCTA  900

seq1  AACTATGCATATATGTTTTGATAATTAAGAATATTAAGTCCAGTTAATAG  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AACTATGCATATATGTTTTGATAATTAAGAATATTAAGTCCAGTT-ATAG  949

seq1  CTTGCAGTCTGACTAGTGTGGATTCAGATATATTCATGCAGGTAGGAAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGTCTGACTAGTGTGGATTCAGATATATTCATGCAGGTAGGAAAT  999

seq1  AGAAGCACTGTAAACTCCTGCCTTGAGATGGCTGAGATTATGAACACTAA  1050
      || |||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  AG-AGCACTGT-AACTCCTGCCTTGAGATGGCTGAGATTATGAACACTAT  1047

seq1  TCTGGAATCTATAAAATGAACCTTTCTTATGAGGCAAAAAGTCAAAGACC  1100
      ||||  ||| |||||||||| ||||||||||||||||||||||  ||  |
seq2  TCTG--ATC-ATAAAATGAA-CTTTCTTATGAGGCAAAAAGTC--AGGAC  1091

seq1  AGTGGGCCTCTTTTTCCAATGATGGCCGACTAGGCCATCTTCTGATTCAT  1150
      ||||   |||||||    ||||||| |||||||||||| ||| || ||||
seq2  AGTG---CTCTTTT---CATGATGG-CGACTAGGCCAT-TTC-GA-TCAT  1131

seq1  AT-GCAGCTAGAAACACGAGCTCTGGGGGGGGGGGTACTTTTTAG  1194
      || |||||||||||| |||   ||  ||||||||| |||||||||
seq2  ATGGCAGCTAGAAAC-CGAAGCCTCTGGGGGGGGGAACTTTTTAG  1175

seq1: chr15_69675876_69676475
seq2: B6Ng01-108B16.g_66_665 (reverse)

seq1  GGAACAAAATATGAGTGATCACAGCCCAAGAACACAGATGGAGATCACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAAATATGAGTGATCACAGCCCAAGAACACAGATGGAGATCACCT  50

seq1  CAAATTATCTGTTTCAATGAGGTAGCAATTTCATGAACTCTTTATAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATCTGTTTCAATGAGGTAGCAATTTCATGAACTCTTTATAGCAA  100

seq1  CCAAATAAATCAAGATACCTTTCAAATACATTGAAGGCATTTTAGGTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAAATCAAGATACCTTTCAAATACATTGAAGGCATTTTAGGTAGG  150

seq1  CAGGTTATCATGTGATGAGGAAAACTCTCCTATAGCCCTTAGATGCTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTATCATGTGATGAGGAAAACTCTCCTATAGCCCTTAGATGCTATC  200

seq1  TGACAGCAGGATTGGCTTTGTTCAGTGGCAGAAAAAATAGGAATTTGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCAGGATTGGCTTTGTTCAGTGGCAGAAAAAATAGGAATTTGTCA  250

seq1  GGATAATACATTCCAAATATTTTATCTGTCAGGCTATTAGGTCCATCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATACATTCCAAATATTTTATCTGTCAGGCTATTAGGTCCATCTTT  300

seq1  ATCTGGTATTCAAAGAGTGCTAGGTCTGACATTTAATAAGGCAAGGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTATTCAAAGAGTGCTAGGTCTGACATTTAATAAGGCAAGGAAAG  350

seq1  ACTATGTAATATGTTAAGGAGAGTCCAAGATAAATAGTAATTACTCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTAATATGTTAAGGAGAGTCCAAGATAAATAGTAATTACTCTGGA  400

seq1  CTTGCAACATTCCAAGCTTTTTTCCATCACTGAGGTTCTAAACAAGCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAACATTCCAAGCTTTTTTCCATCACTGAGGTTCTAAACAAGCACC  450

seq1  CAGTTATTTCTTTTCTGACATGGTATTCATTCAGGGACTCTCATTCACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATTTCTTTTCTGACATGGTATTCATTCAGGGACTCTCATTCACAC  500

seq1  CATATAGGAGATAGCAAAGATACAATACTACACATTCAATAATTTTTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAGGAGATAGCAAAGATACAATACTACACATTCAATAATTTTTGAT  550

seq1  CATTTAAATAAGAAAGAGTCAGTTTTATAGAAAAGGTGGTAATAGAATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAATAAGAAAGAGTCAGTTTTATAGAAAAGGTGGTAATAGAATTC  600