BAC Information

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BAC

Clone NameB6Ng01-109C23
Chromosome15 (Build37)
Map Location 43,385,937 - 43,523,248
singlet/doubletdoublet
Overlap genenone
Upstream geneAngpt1, Rspo2, LOC675960, Eif3s6, Ttc35
Downstream geneLOC100039288, Tmem74, LOC100039309, Trhr, LOC665041, Nudcd1, Eny2, Pkhd1l1, Ebag9, 5730410E15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109C23.bB6Ng01-109C23.g
ACCDH916159DH916160
length506910
definitionDH916159|Mus musculus domesticus DNA, BAC clone: B6Ng01-109C23, 5' end.DH916160|Mus musculus domesticus DNA, BAC clone: B6Ng01-109C23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,522,737 - 43,523,248)(43,385,937 - 43,386,666)
sequence
ttaagctatatacacagagaggacaatctagcagtagcaaaaaccagatc
tgactagtttaggaggcaagaggcatgcattgaagggtaccagagaatat
accttacatgctaagccattgctttggagaattgtcaacatggttcaaat
ccatctccttctaggttctcgagcttgttattcacaattccaagttgttg
acagaatcaaatggaacattcacctttatattagatgcataccttggggc
aatggagaggatgttggtatggtaataaaatttgtaaatatatatgtagc
tttaaggtatcattcctgcaacagggacagtttccagaagagaggaactc
ctaaatcaaacagagacaagacattctacaacatgagctttccaaagtga
gacatgagaaagaatgggaggagaggcccttggtcctgtgaaggctctat
tccccagtataggggaatgccaggaccaggaatgggagtggttgggttgg
ggagca
gaattccacacacagaattgacaagaaagtagttcaacagaatcaaagcc
attagaatctaagaagtggaatctcatctgtatccatgggaaaatctagt
ctccctaacttattggtcacttatttatttttctcttcaaaatgcactaa
gtacaatttatttacttgttgaattctgagggttattcaactgtcctgcc
ctaactccagtttcactttgtgatcaaacccagggatacagcttttagtt
gggcaccagctaaatttctatgtgttcagtggtctaagtaagtggtgcct
tcagtaatagggccttattgtgaggttctagaggggagctttcttcttat
tttctattcctgtgataaaacactatgcccaaggtaacttacaaaaaaaa
gtctttaatttggagattatggattctgaaggttggttggtaaattccat
aacattttttcatgattatcatgaaacggagtatggcagcagacagacag
gcatggtgctacagtagtagctgacagcttacgtcttgaaatacaatcat
gaggcagaatgagctaactgggaataatgagggtttttgaaacctcaaag
cccctcccattgacacacctcctctaacaaggcctcatcttctgaaactt
cccaaatggattcactaatctgagaccaagtattcaaatatttgagcctt
cagaggccattactattctagctatcacagaaaaccatagatttgtcatg
gcctgtgatttggggtgagatggtctatgggattcttttggccagtgact
tctcaagatgtaattcattccttgctggaggttttatttgatggtttaag
ttatctagttgagaatcctcttctctgttatatggtggctcagtataagt
ttcttagtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_43522737_43523248
seq2: B6Ng01-109C23.b_44_555 (reverse)

seq1  TGCTCCCCAACCCAACCACTCCCATTCCTGGTCCTGGCATTCCCCTATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCCAACCCAACCACTCCCATTCCTGGTCCTGGCATTCCCCTATAC  50

seq1  TGGGGAATAGAGCCTTCACAGGACCAAGGGCCTCTCCTCCCATTCTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAATAGAGCCTTCACAGGACCAAGGGCCTCTCCTCCCATTCTTTCT  100

seq1  CATGTCTCACTTTGGAAAGCTCATGTTGTAGAATGTCTTGTCTCTGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTCACTTTGGAAAGCTCATGTTGTAGAATGTCTTGTCTCTGTTTG  150

seq1  ATTTAGGAGTTCCTCTCTTCTGGAAACTGTCCCTGTTGCAGGAATGATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGAGTTCCTCTCTTCTGGAAACTGTCCCTGTTGCAGGAATGATAC  200

seq1  CTTAAAGCTACATATATATTTACAAATTTTATTACCATACCAACATCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGCTACATATATATTTACAAATTTTATTACCATACCAACATCCTC  250

seq1  TCCATTGCCCCAAGGTATGCATCTAATATAAAGGTGAATGTTCCATTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGCCCCAAGGTATGCATCTAATATAAAGGTGAATGTTCCATTTGA  300

seq1  TTCTGTCAACAACTTGGAATTGTGAATAACAAGCTCGAGAACCTAGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCAACAACTTGGAATTGTGAATAACAAGCTCGAGAACCTAGAAGG  350

seq1  AGATGGATTTGAACCATGTTGACAATTCTCCAAAGCAATGGCTTAGCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGATTTGAACCATGTTGACAATTCTCCAAAGCAATGGCTTAGCATG  400

seq1  TAAGGTATATTCTCTGGTACCCTTCAATGCATGCCTCTTGCCTCCTAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTATATTCTCTGGTACCCTTCAATGCATGCCTCTTGCCTCCTAAAC  450

seq1  TAGTCAGATCTGGTTTTTGCTACTGCTAGATTGTCCTCTCTGTGTATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGATCTGGTTTTTGCTACTGCTAGATTGTCCTCTCTGTGTATATA  500

seq1  GCTTAAGAATTC  512
      ||||||||||||
seq2  GCTTAAGAATTC  512

seq1: chr15_43385937_43386666
seq2: B6Ng01-109C23.g_63_792

seq1  GAATTCCACACACAGAATTGACAAGAAAGTAGTTCAACAGAATCAAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACACAGAATTGACAAGAAAGTAGTTCAACAGAATCAAAGCC  50

seq1  ATTAGAATCTAAGAAGTGGAATCTCATCTGTATCCATGGGAAAATCTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAATCTAAGAAGTGGAATCTCATCTGTATCCATGGGAAAATCTAGT  100

seq1  CTCCCTAACTTATTGGTCACTTATTTATTTTTCTCTTCAAAATGCACTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTAACTTATTGGTCACTTATTTATTTTTCTCTTCAAAATGCACTAA  150

seq1  GTACAATTTATTTACTTGTTGAATTCTGAGGGTTATTCAACTGTCCTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAATTTATTTACTTGTTGAATTCTGAGGGTTATTCAACTGTCCTGCC  200

seq1  CTAACTCCAGTTTCACTTTGTGATCAAACCCAGGGATACAGCTTTTAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTCCAGTTTCACTTTGTGATCAAACCCAGGGATACAGCTTTTAGTT  250

seq1  GGGCACCAGCTAAATTTCTATGTGTTCAGTGGTCTAAGTAAGTGGTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACCAGCTAAATTTCTATGTGTTCAGTGGTCTAAGTAAGTGGTGCCT  300

seq1  TCAGTAATAGGGCCTTATTGTGAGGTTCTAGAGGGGAGCTTTCTTCTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAATAGGGCCTTATTGTGAGGTTCTAGAGGGGAGCTTTCTTCTTAT  350

seq1  TTTCTATTCCTGTGATAAAACACTATGCCCAAGGTAACTTACAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTCCTGTGATAAAACACTATGCCCAAGGTAACTTACAAAAAAAA  400

seq1  GTCTTTAATTTGGAGATTATGGATTCTGAAGGTTGGTTGGTAAATTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTAATTTGGAGATTATGGATTCTGAAGGTTGGTTGGTAAATTCCAT  450

seq1  AACATTTTTTCATGATTATCATGAAACGGAGTATGGCAGCAGACAGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTTTCATGATTATCATGAAACGGAGTATGGCAGCAGACAGACAG  500

seq1  GCATGGTGCTACAGTAGTAGCTGACAGCTTACGTCTTGAAATACAATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTGCTACAGTAGTAGCTGACAGCTTACGTCTTGAAATACAATCAT  550

seq1  GAGGCAGAATGAGCTAACTGGGAATAATGAGGGTTTTTGAAACCTCAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAATGAGCTAACTGGGAATAATGAGGGTTTTTGAAACCTCAAAG  600

seq1  CCCCTCCCATTGACACACCTCCTCTAACAAGGCCTCATCTTCTGAAACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCATTGACACACCTCCTCTAACAAGGCCTCATCTTCTGAAACTT  650

seq1  CCCAAATGGATTCACTAATCTGAGACCAAGTATTCAAATATTTGAGCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATGGATTCACTAATCTGAGACCAAGTATTCAAATATTTGAGCCTT  700

seq1  CAGAGGCCATTACTATTCTAGCTATCACAG  730
      ||||||||||||||||||||||||||||||
seq2  CAGAGGCCATTACTATTCTAGCTATCACAG  730