BAC Information

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BAC

Clone NameB6Ng01-110J15
Chromosome15 (Build37)
Map Location 93,060,143 - 93,215,235
singlet/doubletdoublet
Overlap geneGlt8d3, Yaf2
Upstream geneCntn1, Pdzrn4, LOC100042552, LOC100043283
Downstream geneZcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631, D630010B17Rik, Adamts20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110J15.bB6Ng01-110J15.g
ACCDH917177DH917178
length681366
definitionDH917177|Mus musculus domesticus DNA, BAC clone: B6Ng01-110J15, 5' end.DH917178|Mus musculus domesticus DNA, BAC clone: B6Ng01-110J15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,214,559 - 93,215,235)(93,060,143 - 93,060,514)
sequence
gaattctcactttttaatactaaaaacagtaaaactacaaaggcaaccca
aatgttgacctttccaccagcaaatattttttcaagattgattgattgat
tttttttgtttggttttttgtttagtttttttggttttttgtttgttttt
ggtttttgttttgttttttttttgttttgtttttctagacagggtttctc
tgtgtagccctggctgtcctggaactcactctgtagactaggctggcctt
gagctcagaaacccgcctgtctctgcctcccaaatgctgggattaaaggc
gtgtgccagcactgcccgacagcatatcattttaatagaataaaaggtaa
aacatgattttgatcgaggaaaagagtatcttatagtaattcataatacc
agatctcggcaaacttgggacaaaagaccatgcagtagcagtggccttcc
ctctcggaacaaggccatgagctttactctctggttttccacttggcact
ttttgcaatctgtcaaggaacaaaacaaagaaaaacttcccaagaaaacc
tacaaaaaggcagcagaactaataagctgagcaaaagcatgcgattcagg
attgagatacaaaaaataaaagaccaaacctggggccagtaagaagatgg
ctcagcatgttaaggcgcttgctgaaaaagc
ttcatttacatttaggggttctatcctggacttagaatgcacaattgata
ccccattattatgtccttaatcagggcacagaaagaagtgaagatagaaa
tacgcaacaatgggggctggagagatggttcagcagttaggaccactgaa
tcctcttctgaaggtcctgagttcaaatcccagcaaccacatggtggctc
acaaccttctataaagagatccgacgccttcttctggtgtagctgaagac
aactacagtgtacttacatataataagaaataaatcttcttagaaagaaa
gaaagaaagaaagaaagaaagaaagaaagaagaaagaaagagagagagag
agaggaggggaaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_93214559_93215235
seq2: B6Ng01-110J15.b_44_724 (reverse)

seq1  GCTTTTTCAGCAAGCGCCTTAACCTGCTGAGCCATCTTCTTACTGGCCCC  50
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GCTTTTTCAGCAAGCGCCTTAACATGCTGAGCCATCTTCTTACTGGCCCC  50

seq1  GGTTTTGTTCTTTTA-TTTTTGTATCTCAATCCTGAATCGCATGCTTTTG  99
       | |||| ||||||| ||||||||||||||||||||||||||||||||||
seq2  AGGTTTGGTCTTTTATTTTTTGTATCTCAATCCTGAATCGCATGCTTTTG  100

seq1  CTCAGCTTATTAGTTCTGCTGCCTTTTTGTAGG-TTTCTTGGGAAGTTTT  148
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTCAGCTTATTAGTTCTGCTGCCTTTTTGTAGGTTTTCTTGGGAAGTTTT  150

seq1  TCTTTGTTTTGTTCCTTGACAGATTGC-AAAAGTGCCAAGTGGAAAACCA  197
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCTTTGTTTTGTTCCTTGACAGATTGCAAAAAGTGCCAAGTGGAAAACCA  200

seq1  GAGAGTAAAGCTCATGGCCTTGTTCCGAGAGGGAAGGCCACTGCTACTGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTAAAGCTCATGGCCTTGTTCCGAGAGGGAAGGCCACTGCTACTGC  250

seq1  ATGGTC-TTTGTCCCAAGTTTGCCGAGATCTGGTATTATGAATTACTATA  296
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTTTTGTCCCAAGTTTGCCGAGATCTGGTATTATGAATTACTATA  300

seq1  AGATACTCTTTTCCTCGATCAAAATCATGTTTTACCTTTTATTCTATTAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTCTTTTCCTCGATCAAAATCATGTTTTACCTTTTATTCTATTAA  350

seq1  AATGATATGCTGTCGGGCAGTGCTGGCACACGCCTTTAATCCCAGCATTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATGCTGTCGGGCAGTGCTGGCACACGCCTTTAATCCCAGCATTT  400

seq1  GGGAGGCAGAGACAGGCGGGTTTCTGAGCTCAAGGCCAGCCTAGTCTACA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGAGACAGGCGGGTTTCTGAGCTCAAGGCCAGCCTAGTCTACA  450

seq1  GAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTAGAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTAGAAA  500

seq1  AACAAAACAAAAAAAAAACAAAACAAAAACCAAAAACAAACAAAAAACCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAAAAAAAAACAAAACAAAAACCAAAAACAAACAAAAAACCA  550

seq1  AAAAAACTAAACAAAAAACCAAACAAAAAAAATCAATCAATCAATCTTGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTAAACAAAAAACCAAACAAAAAAAATCAATCAATCAATCTTGA  600

seq1  AAAAATATTTGCTGGTGGAAAGGTCAACATTTGGGTTGCCTTTGTAGTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTTGCTGGTGGAAAGGTCAACATTTGGGTTGCCTTTGTAGTTT  650

seq1  TACTGTTTTTAGTATTAAAAAGTGAGAATTC  677
      |||||||||||||||||||||||||||||||
seq2  TACTGTTTTTAGTATTAAAAAGTGAGAATTC  681

seq1: chr15_93060143_93060514
seq2: B6Ng01-110J15.g_65_436

seq1  GAATTCTTCATTTACATTTAGGGGTTCTATCCTGGACTTAGAATGCACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATTTACATTTAGGGGTTCTATCCTGGACTTAGAATGCACAA  50

seq1  TTGATACCCCATTATTATGTCCTTAATCAGGGCACAGAAAGAAGTGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACCCCATTATTATGTCCTTAATCAGGGCACAGAAAGAAGTGAAGA  100

seq1  TAGAAATACGCAACAATGGGGGCTGGAGAGATGGTTCAGCAGTTAGGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATACGCAACAATGGGGGCTGGAGAGATGGTTCAGCAGTTAGGACC  150

seq1  ACTGAATCCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATCCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGG  200

seq1  TGGCTCACAACCTTCTATAAAGAGATCCGACGCCTTCTTCTGGTGTAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCACAACCTTCTATAAAGAGATCCGACGCCTTCTTCTGGTGTAGCT  250

seq1  GAAGACAACTACAGTGTACTTACATATAATAAGAAATAAATCTTCTTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAACTACAGTGTACTTACATATAATAAGAAATAAATCTTCTTAGA  300

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAGAG  350

seq1  AGAGAGAGAGGAGGGGAAAGGA  372
      ||||||||||||||||||||||
seq2  AGAGAGAGAGGAGGGGAAAGGA  372