BAC Information

Click to search

BAC

Clone NameB6Ng01-114J22
Chromosome15 (Build37)
Map Location 68,238,251 - 68,273,122
singlet/doubletdoublet
Overlap genenone
Upstream geneZfat1, LOC100041000
Downstream geneEG665945, EG633752, Khdrbs3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114J22.bB6Ng01-114J22.g
ACCDH920097DH920098
length8381,101
definitionDH920097|Mus musculus domesticus DNA, BAC clone: B6Ng01-114J22, 5' end.DH920098|Mus musculus domesticus DNA, BAC clone: B6Ng01-114J22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,238,251 - 68,238,882)(68,272,014 - 68,273,122)
sequence
gaattctgtactcaaatcttgaattgccttcgtcatttctaccagctttg
tgttaatttttctcttgaccattccctaggtatttattatcttcaagttc
attgtcttttacttcattgagctgtttacttgaattctttgataaagttt
gtgattgttcttttaaagtttctgtcctggtctcacctataattcccatt
ggcattgatttttttttcatgttttatttttttcgtacgtttatgatgag
atctttgcatatagacttctttggttagttttgagtctggtatggacaga
gcaggttggggcagaagagaagatgtacagattgggctggacctcgaggt
tggatattagttgtaatgaagtcaggtgtatccagggcatgggcctggca
tgcaggatgcgcatcctggttcaagcttagagttaaggggtaaatctggg
gtttggagcaggagtgatgaggggaggaataggccgaataatcaggctag
acacaagagaaggttatgaaggctctgtcttggtggagagatcagatgaa
tcttgggaggatcctgtaggttgggggcaggcatgggtgaccataccagg
cccaagcactgaatgtgggatctcaggatagataggaaggtttgggagga
tgtataagggtaagaatctggtaaagacattcatctggaccctagagaat
atctgttacatgtagatgtattaaaacattgtattaaaagaaatgatcac
tacccatactatcattagtgtaagttttctatcagaattcttggttgttt
cttaagcatgcttttcactatctctgcggttagtacta
gaattcctaagccttacagaaagagggtgaagtcacatggttaaaaaatt
aggtactagatttgtggggtagataatcaattccattcttgattctacat
cttcctgaccctcaaacatgggacaagttacttaagacttatgagtttgt
tttcttataaaaataaaagccaaacttaaaatatattagtgagccttaac
tgaggtacaatatctacaagtacctcaaatgaccaagtcaacagtagaac
agccatgactcatcatgacagaaaaactggaaacttgaaaaacataagct
caccagagagatcctgattctgaaatcagaaaggtctcaggttctaacct
cagaccgagccacttagggctgagtgaccttaatagaattaaatgaacct
tctgagttttaaagtcttcatttataaaaccagcattaccatgccaccat
agcaggttcagcatatgcacacacacacacacacacacacacacacacac
acacaccacccccaaatgcttggtgttttatatacacaaacacgtgcgca
ctgatgcacactcaaatagcaggcactatgtatcccaatactagctgatc
tttttctactactcccaatttcgttttgcagagaaggatccaagttcttt
atgagaaatgcattgcgtcactgtctccacaacacttctgatgggtccct
gtgctccatccacacagcacgttccctcctcccacagggaagctcactgc
tgaaaactaggccagccctttgaaccagcttctttctccccacagggaaa
ccgcagcaggcagcaagcggggatgctttgtctgatccttggagctgctc
ttccgggtgtgagactgacaggcgctgtcacaggagagaggccacatcct
gacacaacccagtggctgcaaagtgtcaggctccatcagttttatgggtc
agatttgatccctgttacagtctgagagattcttgatctgacagacacag
gttgcatatgggactgcatagtatacaggcagtctgagaacagacagttc
ttctgtgaggagtctctgaacatgtcatgaatctctacgaacctggagat
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_68238251_68238882
seq2: B6Ng01-114J22.b_244_879

seq1  CATTGATTTTTTTTTCATGTTTTATTTTTTTCGTACGTTTATGATGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATTTTTTTTTCATGTTTTATTTTTTTCGTACGTTTATGATGAGAT  50

seq1  CTTTGCATATAGACTTCTTTGGTTAGTTTTGAGTCTGGTATGGACAGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCATATAGACTTCTTTGGTTAGTTTTGAGTCTGGTATGGACAGAGC  100

seq1  AGGTTGGGGCAGAAGAGAAGATGTACAGATTGGGCTGGACCTCGAGGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGGGCAGAAGAGAAGATGTACAGATTGGGCTGGACCTCGAGGTTG  150

seq1  GATATTAGTTGTAATGAAGTCAGGTGTATCCAGGGCATGGGCCTGGCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAGTTGTAATGAAGTCAGGTGTATCCAGGGCATGGGCCTGGCATG  200

seq1  CAGGATGCGCATCCTGGTTCAAGCTTAGAGTTAAGGGGTAAATCTGGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGCGCATCCTGGTTCAAGCTTAGAGTTAAGGGGTAAATCTGGGGT  250

seq1  TTGGAGCAGGAGTGATGAGGGGAGGAATAGGCCGAATAATCAGGCTAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCAGGAGTGATGAGGGGAGGAATAGGCCGAATAATCAGGCTAGAC  300

seq1  ACAAGAGAAGGTTATGAAGGCTCTGTCTTGGTGGAGAGATCAGATGAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGAAGGTTATGAAGGCTCTGTCTTGGTGGAGAGATCAGATGAATC  350

seq1  TTGGGAGGATCCTGTAGGTTGGGGGCAGGCATGGGTGACCATACCAGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGATCCTGTAGGTTGGGGGCAGGCATGGGTGACCATACCAGGCC  400

seq1  CAAGCACTGAATGTGGGATCTCAGGATAGATAGGAAGGTTTGGGAGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACTGAATGTGGGATCTCAGGATAGATAGGAAGGTTTGGGAGGATG  450

seq1  TATAAGGGTAAGAATCTGGTAAAGACATTCATCTGGACCCTAGAGAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGGTAAGAATCTGGTAAAGACATTCATCTGGACCCTAGAGAATAT  500

seq1  CTGTTACATGTAGATGTATTAAAACA-TGTATTAAAAG-AATGATCACTA  548
      |||||||||||||||||||||||||| ||||||||||| |||||||||||
seq2  CTGTTACATGTAGATGTATTAAAACATTGTATTAAAAGAAATGATCACTA  550

seq1  CCCATACTATCATTAGTGTAAGTTTTCTATCAGAATCCT--GGTGTTTCT  596
      |||||||||||||||||||||||||||||||||||| ||  | |||||||
seq2  CCCATACTATCATTAGTGTAAGTTTTCTATCAGAATTCTTGGTTGTTTCT  600

seq1  TAAGCATGCCTTTCACTATCTCTGCGGTTAGTACTA  632
      ||||||||| ||||||||||||||||||||||||||
seq2  TAAGCATGCTTTTCACTATCTCTGCGGTTAGTACTA  636

seq1: chr15_68272014_68273122
seq2: B6Ng01-114J22.g_67_1167 (reverse)

seq1  GATCTTCAGGTTCGTAGAGATTTCATTGACATGTTCAGAGACCTCCTCAA  50
      ||||| |||||||||||||| |||| ||||||||||||||| ||||||| 
seq2  GATCTCCAGGTTCGTAGAGA-TTCA-TGACATGTTCAGAGA-CTCCTCA-  46

seq1  CAAGAAGAACCTGTCCTGTTCTCAGACTGCCTTGTATACTATTGCAGT-C  99
        ||||||| |||| |||||||||||||||| ||||||||| |||||| |
seq2  -CAGAAGAA-CTGT-CTGTTCTCAGACTGCC-TGTATACTA-TGCAGTCC  91

seq1  CATATGCAACCTGTGTCTGTCAGATC-AGAATCTCTCAGACTGTAAACAG  148
      |||||||||||||||||||||||||| ||||||||||||||||| |||||
seq2  CATATGCAACCTGTGTCTGTCAGATCAAGAATCTCTCAGACTGT-AACAG  140

seq1  GGATCAAATCTGACCCATAAAACTGATGGAGCCTGACACTTTGCAGCCAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAAATCTGACCCATAAAACTGATGGAGCCTGACACTTTGCAGCCAC  190

seq1  TGGGTTGTGTCAGGATGTGGCCTCTCTCCTGTGACAGCGCCTGTCAGTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGTGTCAGGATGTGGCCTCTCTCCTGTGACAGCGCCTGTCAGTCT  240

seq1  CACACCCGGAAGAGCAGCTCCAAGGATCAGACAAAGCATCCCCGCTTGCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCGGAAGAGCAGCTCCAAGGATCAGACAAAGCATCCCCGCTTGCT  290

seq1  GCCTGCTGCGGTTTCCCTGTGGGGAGAAAGAAGCTGGTTCAAAGGGCTGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTGCGGTTTCCCTGTGGGGAGAAAGAAGCTGGTTCAAAGGGCTGG  340

seq1  CCTAGTTTTCAGCAGTGAGCTTCCCTGTGGGAGGAGGGAACGTGCTGTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTTTCAGCAGTGAGCTTCCCTGTGGGAGGAGGGAACGTGCTGTGT  390

seq1  GGATGGAGCACAGGGACCCATCAGAAGTGTTGTGGAGACAGTGACGCAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGCACAGGGACCCATCAGAAGTGTTGTGGAGACAGTGACGCAAT  440

seq1  GCATTTCTCATAAAGAACTTGGATCCTTCTCTGCAAAACGAAATTGGGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCTCATAAAGAACTTGGATCCTTCTCTGCAAAACGAAATTGGGAG  490

seq1  TAGTAGAAAAAGATCAGCTAGTATTGGGATACATAGTGCCTGCTATTTGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGAAAAAGATCAGCTAGTATTGGGATACATAGTGCCTGCTATTTGA  540

seq1  GTGTGCATCAGTGCGCACGTGTTTGTGTATATAAAACACCAAGCATTTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATCAGTGCGCACGTGTTTGTGTATATAAAACACCAAGCATTTGG  590

seq1  GGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATATG  640

seq1  CTGAACCTGCTATGGTGGCATGGTAATGCTGGTTTTATAAATGAAGACTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACCTGCTATGGTGGCATGGTAATGCTGGTTTTATAAATGAAGACTT  690

seq1  TAAAACTCAGAAGGTTCATTTAATTCTATTAAGGTCACTCAGCCCTAAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCAGAAGGTTCATTTAATTCTATTAAGGTCACTCAGCCCTAAGT  740

seq1  GGCTCGGTCTGAGGTTAGAACCTGAGACCTTTCTGATTTCAGAATCAGGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCGGTCTGAGGTTAGAACCTGAGACCTTTCTGATTTCAGAATCAGGA  790

seq1  TCTCTCTGGTGAGCTTATGTTTTTCAAGTTTCCAGTTTTTCTGTCATGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGGTGAGCTTATGTTTTTCAAGTTTCCAGTTTTTCTGTCATGAT  840

seq1  GAGTCATGGCTGTTCTACTGTTGACTTGGTCATTTGAGGTACTTGTAGAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATGGCTGTTCTACTGTTGACTTGGTCATTTGAGGTACTTGTAGAT  890

seq1  ATTGTACCTCAGTTAAGGCTCACTAATATATTTTAAGTTTGGCTTTTATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACCTCAGTTAAGGCTCACTAATATATTTTAAGTTTGGCTTTTATT  940

seq1  TTTATAAGAAAACAAACTCATAAGTCTTAAGTAACTTGTCCCATGTTTGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAGAAAACAAACTCATAAGTCTTAAGTAACTTGTCCCATGTTTGA  990

seq1  GGGTCAGGAAGATGTAGAATCAAGAATGGAATTGATTATCTACCCCACAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAGGAAGATGTAGAATCAAGAATGGAATTGATTATCTACCCCACAA  1040

seq1  ATCTAGTACCTAATTTTTTAACCATGTGACTTCACCCTCTTTCTGTAAGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTACCTAATTTTTTAACCATGTGACTTCACCCTCTTTCTGTAAGG  1090

seq1  CTTAGGAATTC  1109
      |||||||||||
seq2  CTTAGGAATTC  1101