BAC Information

Click to search

BAC

Clone NameB6Ng01-114K12
Chromosome15 (Build37)
Map Location 46,637,353 - 46,826,032
singlet/doubletdoublet
Overlap geneLOC100039438
Upstream geneLOC100039389, EG432951
Downstream geneLOC665130, LOC100039485, LOC100039493, Csmd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114K12.bB6Ng01-114K12.g
ACCDH920125DH920126
length1,109981
definitionDH920125|Mus musculus domesticus DNA, BAC clone: B6Ng01-114K12, 5' end.DH920126|Mus musculus domesticus DNA, BAC clone: B6Ng01-114K12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,637,353 - 46,638,487)(46,825,059 - 46,826,032)
sequence
gaattcacaatgtattaaaattttcttgggtactaagacatttttccata
aaaatataactcactctaattctggataccagacttgaagaaacatgtta
caagtgttaaaaaacatattttaaaatgctagtgagcagagctttgatga
gattctttctaagacattggtaggatgcagctgtgatttgaatggtttga
ataatatggagtaattgggactttcttccactttcatttactgcaaaaga
gacacagtaattgatggatttcctttgtgtgcaaaaaggaagtctcagag
atactttctgaacacatttaatgcagttttaaaattaaagtaggaaaagt
aaatatttaacttcaagacaaataccccaaatatttatcctaaggaactc
agccttgcaaatttagatgtcttattatcttggcagcaggttttagcaaa
cactctacactcattagattcaatgctctttcaatatattaaagtttctc
tggctgccaagaatctatttttgcccctaaaaatataattagcatgataa
gtttactataacttagaatcaagcctttcaaagtatcaaagtatatgctt
tgagtatatgctttaaacattaagaaatattttatatttttcctaggaaa
tagaagacaaatgaatcttgaatataaagaaatcaatctatgtatgtaca
aactgagcccatccattgtatcaagccatatactcatgtttattatacaa
aaactgataatataaatctatataataaacattatataactccatcacta
caactagtagaataatgcatattttattccagtcttaacctatgaaattt
gaaatttcactaatttcaaaagctagtaagtagtgtggattaattagcac
tccagcctatatttcaaacatggaatcatccagaatctacaaagtacatg
acagtaaaattattttactaggaatattgcataatatttaatatatatat
atcagggtgatatttattctagttatgatgacgagtgacacacagactat
gaaaaactaaagacaattgttcccactttcaaattctgcaacgttcgtac
agtctagtg
gaattcccaatcctatgtacttggcatgttgttggtagctagtttttcaa
agtaggctgcgcaatctgttagtcattgggttctatgaggaaactgggtc
agttcaataaatttggtgagtacagattcttgacatctttcagacctact
gatttactataaacctcaatgactttgcccttaatttcctagaaatatgt
tacattttattaaccattttcaagaccctttatagaccaactgttactct
ggtctttctatgactaagattattgttccttatttgttctgttctttgag
cacaaatacctgttttctcactttcaaatttattgtcccatgtctttcag
taatgttggttactttccataaaccatgagacaatgatgatacaggtttg
gaaatatttgtgtttcctccaagaagaaatttatttttccccttctttct
gtttttctgtaggaggattaggttgaagtatatcctgttactagaattta
tacagaaacacacatctggtggtatttttgggtttacataagtaattcac
tttatcatgctcacttatttggaatttaaattttgttcaacacaattttt
ctttcttcaagtttctatgaaacaatttttagaagacatttggtgaattc
ccaagatacttctagattattgactcatgaattctgacagtacagtgtct
attctagttactgttctatggctgtgaagagacgccatgaccaagggaac
ttataaagaaataatttaattaatttaattttaattaaattaaaatttaa
ttttaattaatttaattaacagtttgcagtttcaagtgggtagtccttat
catagtggagagcatggtaatagatatgtaagcatagagctagatattag
ctaagaattacatcccaatctgcaagcagagagagagagagagagagaga
gagagagagagagagttggagaagaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_46637353_46638487
seq2: B6Ng01-114K12.b_45_1153

seq1  GAATTCACAATGTATTAAAATTTTCTTGGGTACTAAGACATTTTTCCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAATGTATTAAAATTTTCTTGGGTACTAAGACATTTTTCCATA  50

seq1  AAAATATAACTCACTCTAATTCTGGATACCAGACTTGAAGAAACATGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAACTCACTCTAATTCTGGATACCAGACTTGAAGAAACATGTTA  100

seq1  CAAGTGTTAAAAAACATATTTTAAAATGCTAGTGAGCAGAGCTTTGATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTTAAAAAACATATTTTAAAATGCTAGTGAGCAGAGCTTTGATGA  150

seq1  GATTCTTTCTAAGACATTGGTAGGATGCAGCTGTGATTTGAATGGTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTTCTAAGACATTGGTAGGATGCAGCTGTGATTTGAATGGTTTGA  200

seq1  ATAATATGGAGTAATTGGGACTTTCTTCCACTTTCATTTACTGCAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATGGAGTAATTGGGACTTTCTTCCACTTTCATTTACTGCAAAAGA  250

seq1  GACACAGTAATTGATGGATTTCCTTTGTGTGCAAAAAGGAAGTCTCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGTAATTGATGGATTTCCTTTGTGTGCAAAAAGGAAGTCTCAGAG  300

seq1  ATACTTTCTGAACACATTTAATGCAGTTTTAAAATTAAAGTAGGAAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTCTGAACACATTTAATGCAGTTTTAAAATTAAAGTAGGAAAAGT  350

seq1  AAATATTTAACTTCAAGACAAATACCCCAAATATTTATCCTAAGGAACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTAACTTCAAGACAAATACCCCAAATATTTATCCTAAGGAACTC  400

seq1  AGCCTTGCAAATTTAGATGTCTTATTATCTTGGCAGCAGGTTTTAGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGCAAATTTAGATGTCTTATTATCTTGGCAGCAGGTTTTAGCAAA  450

seq1  CACTCTACACTCATTAGATTCAATGCTCTTTCAATATATTAAAGTTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTACACTCATTAGATTCAATGCTCTTTCAATATATTAAAGTTTCTC  500

seq1  TGGCTGCCAAGAATCTATTTTTGCCCCTAAAAATATAATTAGCATGATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCCAAGAATCTATTTTTGCCCCTAAAAATATAATTAGCATGATAA  550

seq1  GTTTACTATAACTTAGAATCAAGCCTTTCAAAGTATCAAAGTATATGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTATAACTTAGAATCAAGCCTTTCAAAGTATCAAAGTATATGCTT  600

seq1  TGAGTATATGCTTTAAACATTAAGAAATATTTTATATTTTTCCTAGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATATGCTTTAAACATTAAGAAATATTTTATATTTTTCCTAGGAAA  650

seq1  TAGAAGACAAATGAATCTTGAATATAAAGAAATCAATCTATGTATGTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGACAAATGAATCTTGAATATAAAGAAATCAATCTATGTATGTACA  700

seq1  AACTGAGCCCATCCATTGTATCAAGCCATATACTCATGTTTATTATACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGCCCATCCATTGTATCAAGCCATATACTCATGTTTATTATACAA  750

seq1  AAACTGATAATATAAATCTATATAATAAACATTATATAACTCCATCACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGATAATATAAATCTATATAATAAACATTATATAACTCCATCACTA  800

seq1  CAACTAGTAGAATAATGCATATTTTATTCCAGTCTTAACCTATGAAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGTAGAATAATGCATATTTTATTCCAGTCTTAACCTATGAAATTT  850

seq1  GAAATTTCACTAATTTCAAAAGCTAGTAAGTAGTTGTGGATTAATTAGCA  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAAATTTCACTAATTTCAAAAGCTAGTAAGTAG-TGTGGATTAATTAGCA  899

seq1  CTCCAGCCTATATTTCAAACATGGAATCATCCAGAATCTACAAAGTACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCCTATATTTCAAACATGGAATCATCCAGAATCTACAAAGTACAT  949

seq1  GACAAGTAAAAATTATTTTACTAGGAAATATTTGCAATAATATTTAAT-T  999
      ||| ||| ||||||||||||||||| |||| |||| |||||||||||| |
seq2  GAC-AGT-AAAATTATTTTACTAGG-AATA-TTGC-ATAATATTTAATAT  994

seq1  ATATAATAATAATCAAGGGTTGATTATTTATTTCTAAGTTATGATGACGA  1049
      |||||      ||||  || ||| |||||| |||| ||||||||||||| 
seq2  ATATA-----TATCA--GGGTGA-TATTTA-TTCT-AGTTATGATGACG-  1033

seq1  AGTGAACACAAACCAGACTATGAAAAACATAAGACAATTGTTCTCAACTT  1099
      |||| |||||   |||||||||||||||  ||||||||||||| ||   |
seq2  AGTG-ACACA---CAGACTATGAAAAACTAAAGACAATTGTTCCCA--CT  1077

seq1  TTCAAATTCTGCAACCGTTTCGTACAGTTCCTAGTG  1135
      |||||||||||||||   ||||||||||  ||||||
seq2  TTCAAATTCTGCAAC--GTTCGTACAGT--CTAGTG  1109

seq1: chr15_46825059_46826032
seq2: B6Ng01-114K12.g_69_1049 (reverse)

seq1  --------TCCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  42
              | ||||  ||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCTTCTCCAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  50

seq1  CTCTGCTTGCAGATTGGGATGTAATTCTTAGCTAATATTCTAGCTCTATG  92
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTCTGCTTGCAGATTGGGATGTAATTCTTAGCTAATA-TCTAGCTCTATG  99

seq1  CTTACATATCTATTACCATGCTCTCCACTATGATAAGGACTACCCACTTG  142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATATCTATTACCATGCTCTCCACTATGATAAGGACTACCCACTTG  149

seq1  AAACTGCAAACTGTTAATTAAATTAATTAAAATTAAATTTTAATTTAATT  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCAAACTGTTAATTAAATTAATTAAAATTAAATTTTAATTTAATT  199

seq1  AAAATTAAATTAATTAAATTATTTCTTTATAAGTTCCCTTGGTCATGGCG  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAATTAATTAAATTATTTCTTTATAAGTTCCCTTGGTCATGGCG  249

seq1  TCTCTTCACAGCCATAGAACAGTAACTAGAATAGACACTGTACTGTCAGA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCACAGCCATAGAACAGTAACTAGAATAGACACTGTACTGTCAGA  299

seq1  ATTCATGAGTCAATAATCTAGAAGTATCTTGGGAATTCACCAAATGTCTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGAGTCAATAATCTAGAAGTATCTTGGGAATTCACCAAATGTCTT  349

seq1  CTAAAAATTGTTTCATAGAAACTTGAAGAAAGAAAAATTGTGTTGAACAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATTGTTTCATAGAAACTTGAAGAAAGAAAAATTGTGTTGAACAA  399

seq1  AATTTAAATTCCAAATAAGTGAGCATGATAAAGTGAATTACTTATGTAAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAATTCCAAATAAGTGAGCATGATAAAGTGAATTACTTATGTAAA  449

seq1  CCCAAAAATACCACCAGATGTGTGTTTCTGTATAAATTCTAGTAACAGGA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAATACCACCAGATGTGTGTTTCTGTATAAATTCTAGTAACAGGA  499

seq1  TATACTTCAACCTAATCCTCCTACAGAAAAACAGAAAGAAGGGGAAAAAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTCAACCTAATCCTCCTACAGAAAAACAGAAAGAAGGGGAAAAAT  549

seq1  AAATTTCTTCTTGGAGGAAACACAAATATTTCCAAACCTGTATCATCATT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTTCTTGGAGGAAACACAAATATTTCCAAACCTGTATCATCATT  599

seq1  GTCTCATGGTTTATGGAAAGTAACCAACATTACTGAAAGACATGGGACAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATGGTTTATGGAAAGTAACCAACATTACTGAAAGACATGGGACAA  649

seq1  TAAATTTGAAAGTGAGAAAACAGGTATTTGTGCTCAAAGAACAGAACAAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTGAAAGTGAGAAAACAGGTATTTGTGCTCAAAGAACAGAACAAA  699

seq1  TAAGGAACAATAATCTTAGTCATAGAAAGACCAGAGTAACAGTTGGTCTA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAACAATAATCTTAGTCATAGAAAGACCAGAGTAACAGTTGGTCTA  749

seq1  TAAAGGGTCTTGAAAATGGTTAATAAAATGTAACATATTTCTAGGAAATT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGTCTTGAAAATGGTTAATAAAATGTAACATATTTCTAGGAAATT  799

seq1  AAGGGCAAAGTCATTGAGGTTTATAGTAAATCAGTAGGTCTGAAAGATGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAAAGTCATTGAGGTTTATAGTAAATCAGTAGGTCTGAAAGATGT  849

seq1  CAAGAATCTGTACTCACCAAATTTATTGAACTGACCCAGTTTCCTCATAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATCTGTACTCACCAAATTTATTGAACTGACCCAGTTTCCTCATAG  899

seq1  AACCCAATGACTAACAGATTGCGCAGCCTACTTTGAAAAACTAGCTACCA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAATGACTAACAGATTGCGCAGCCTACTTTGAAAAACTAGCTACCA  949

seq1  ACAACATGCCAAGTACATAGGATTGGGAATTC  974
      ||||||||||||||||||||||||||||||||
seq2  ACAACATGCCAAGTACATAGGATTGGGAATTC  981