BAC Information

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BAC

Clone NameB6Ng01-115I21
Chromosome15 (Build37)
Map Location 44,514,146 - 44,540,914
singlet/doubletdoublet
Overlap gene5730410E15Rik
Upstream geneLOC100039288, Tmem74, LOC100039309, Trhr, LOC665041, Nudcd1, Eny2, Pkhd1l1, Ebag9
Downstream geneA930017M01Rik, EG432950, Kcnv1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115I21.bB6Ng01-115I21.g
ACCDH920787DH920788
length588276
definitionDH920787|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I21, 5' end.DH920788|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,514,146 - 44,514,739)(44,540,639 - 44,540,914)
sequence
caccacaaagtgtgaacactggcatggattttcccataatcctctgcccc
caattcaactaatattaatagtgaacaatttataatgcctactacaagca
ctgccctagccagaaaccctctaaggtaggtatcatgataactctatttt
tcagatgagtggtggaagtatagagaaatgaagccctttgttcggggtca
tgctgcctttggagggccttgccagtgtaaggccaagacagcctgacttc
agaaatcacacatccagctgttctgtgttgccttcagcactgggctgccc
acatctatgaactttacaatttttttttaatcatttcttcccaagtaaat
gtctgctttatagaaaggactttagaggctttgccgatggctagaaaatg
atagggtcataaggggcaggctgggtgcaaagcttaaattcccagagcag
acacccgtgagtaagggatggagcatggaatggagggaagaggtctcaga
gctgaggtctggacgacagatatcaggggcagggagagcaggctcaggca
taggaggacagggggttcggggttgggggtggggtgaa
cttaagtacaactgaacaggatctaaagtctagatggctaagtgcaggat
ggagatagaggaagcagacaagcacagcatagatgacttagcacaaagct
cccattctcttaatagcattggatttgccaactctggggagtttgggata
tatgaagtcagaagttataagtgattttgaatgtatttcttttaattaaa
agtatttatgctgtcttattgactcagatataggactttatatataatgt
gtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_44514146_44514739
seq2: B6Ng01-115I21.b_45_638

seq1  GAATTCCACCACAAAGTGTGAACACTGGCATGGATTTTCCCATAATCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCACAAAGTGTGAACACTGGCATGGATTTTCCCATAATCCTC  50

seq1  TGCCCCCAATTCAACTAATATTAATAGTGAACAATTTATAATGCCTACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCAATTCAACTAATATTAATAGTGAACAATTTATAATGCCTACTA  100

seq1  CAAGCACTGCCCTAGCCAGAAACCCTCTAAGGTAGGTATCATGATAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACTGCCCTAGCCAGAAACCCTCTAAGGTAGGTATCATGATAACTC  150

seq1  TATTTTTCAGATGAGTGGTGGAAGTATAGAGAAATGAAGCCCTTTGTTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCAGATGAGTGGTGGAAGTATAGAGAAATGAAGCCCTTTGTTCG  200

seq1  GGGTCATGCTGCCTTTGGAGGGCCTTGCCAGTGTAAGGCCAAGACAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATGCTGCCTTTGGAGGGCCTTGCCAGTGTAAGGCCAAGACAGCCT  250

seq1  GACTTCAGAAATCACACATCCAGCTGTTCTGTGTTGCCTTCAGCACTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCAGAAATCACACATCCAGCTGTTCTGTGTTGCCTTCAGCACTGGG  300

seq1  CTGCCCACATCTATGAACTTTACAATTTTTTTTTAATCATTTCTTCCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCACATCTATGAACTTTACAATTTTTTTTTAATCATTTCTTCCCAA  350

seq1  GTAAATGTCTGCTTTATAGAAAGGACTTTAGAGGCTTTGCCGATGGCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGTCTGCTTTATAGAAAGGACTTTAGAGGCTTTGCCGATGGCTAG  400

seq1  AAAATGATAGGGTCATAAGGGGCAGGCTGGGTGCAAAGCTTAAATTCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATAGGGTCATAAGGGGCAGGCTGGGTGCAAAGCTTAAATTCCCA  450

seq1  GAGCAGACACCCGTGAGTAAGGGATGGAGCATGGAATGGAGGGAAGAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGACACCCGTGAGTAAGGGATGGAGCATGGAATGGAGGGAAGAGGT  500

seq1  CTCAGAGCTGAGGTCTGGACGACAGATATCAGGGGCAGGGAGAGCAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGCTGAGGTCTGGACGACAGATATCAGGGGCAGGGAGAGCAGGCT  550

seq1  CAGGCATAGGAGGACAGGGGGTTCGGGGTTGGGGGTGGGGTGAA  594
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATAGGAGGACAGGGGGTTCGGGGTTGGGGGTGGGGTGAA  594

seq1: chr15_44540639_44540914
seq2: B6Ng01-115I21.g_72_347 (reverse)

seq1  ACACACACACACACACACACACACACACATTATATATAAAGTCCTATATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACATTATATATAAAGTCCTATATC  50

seq1  TGAGTCAATAAGACAGCATAAATACTTTTAATTAAAAGAAATACATTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCAATAAGACAGCATAAATACTTTTAATTAAAAGAAATACATTCAA  100

seq1  AATCACTTATAACTTCTGACTTCATATATCCCAAACTCCCCAGAGTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTTATAACTTCTGACTTCATATATCCCAAACTCCCCAGAGTTGGC  150

seq1  AAATCCAATGCTATTAAGAGAATGGGAGCTTTGTGCTAAGTCATCTATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAATGCTATTAAGAGAATGGGAGCTTTGTGCTAAGTCATCTATGC  200

seq1  TGTGCTTGTCTGCTTCCTCTATCTCCATCCTGCACTTAGCCATCTAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTGTCTGCTTCCTCTATCTCCATCCTGCACTTAGCCATCTAGACT  250

seq1  TTAGATCCTGTTCAGTTGTACTTAAG  276
      ||||||||||||||||||||||||||
seq2  TTAGATCCTGTTCAGTTGTACTTAAG  276