BAC Information

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BAC

Clone NameB6Ng01-115O11
Chromosome15 (Build37)
Map Location 99,882,782 - 100,061,266
singlet/doubletdoublet
Overlap gene4930478M13Rik, Dip2b, Atf1
Upstream genePrph1, Troap, C1ql4, 2810451A06Rik, Spats2, Kcnh3, Mcrs1, EG545136, Prpf40b, Fmnl3, Tegt, C230021P08Rik, 4930556P03Rik, Faim2, LOC545137, Aqp2, Aqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481, LOC100042918, 1700030F18Rik, Gm920, D330037H05Rik
Downstream gene4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2, Pou6f1, Dazap2, BC004728, Bin2, Ela1, Galnt6, Slc4a8, Scn8a, EG668225, Ankrd33, Acvrl1, Acvr1b, Grasp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115O11.bB6Ng01-115O11.g
ACCDH921045DH921046
length840630
definitionDH921045|Mus musculus domesticus DNA, BAC clone: B6Ng01-115O11, 5' end.DH921046|Mus musculus domesticus DNA, BAC clone: B6Ng01-115O11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,060,435 - 100,061,266)(99,882,782 - 99,883,411)
sequence
gaattcttaatcataagctagagagatggcttagtgggttgagaacactg
gctgctctttgagaggacttgggtttgacttcccagcacctataaagtgg
ctcaaaaccatatacaactccaggggatctactggcttccagaggaacac
atagcacacaggcacatttgaaggcaaaacatccatacacataaaatact
tttttagccgggcgtggtggaacacacctttaatcccagcactcaggagg
cagaggcagtcggatttctgagttccaggccagccagggctacacagaga
aaccgttttgaaaaaacagaaacaaacaccacccccccccaattcaatca
aacaaacaaacaaacaaacacctttttctcactataagcaacaaactgta
cctgttctgttttactgaattatcaactgcaaatacacttaaaaacaaac
aaacttattttataagcatgggtgttttgcctgcatgtgtgtagggtgta
ggggtacaggattacccaggagctagttacaggcagttgtgagctgccat
gagaatgctgcgacttgaacccaggtcttcttctgaagagcagccagtct
ccccattcctaaaattttaaatctggctgaggtttttgtttttgtttttt
agacaggatttttaaagcccaggctgcctctgcctcctgagtgctaagaa
aaaggccataggtatgtcctaccatgctttgactgaagtctgcttttctt
ttttttaaagatttttaattattatttacaaaattaagtacactgtagct
tgtcttcagacacaccagatgagggcatcagattgtcatc
gaattcactggaaagaccaggttagcctcagagtcacagagagctgcctc
tgcctcctgggtattggagttaaaggtgggtagcacaccagctaagatgt
atttgagtgtgtgtgtacacgcgtgtgtaagtgtgtaaaggtagaatgaa
gatttcatttccatagtagagccttgaccatttccatggacaatgggaat
gatcacttaaagggaggaggatgaccattcaggagagaaaatggagagcg
tgggaagacccctctgacaggcgagttcctgtgaatcgaaggatgcagca
ggtaccaggaggcttgtcttatctggggttggaaacagcaagaagagaag
ataactcctctgaagtgccaggggtgggcacagaagtaagactcaggtgg
ctagtgtgctgctttgctggagacaggtcctgagatttgaagctatagag
aacccgggggagggagatggggaatgtgattgcattagtcagtcctgggg
cccatggtcagggcagagacaatgagtgtagttctgtctgaatgagagta
cagaggcagattcacagctgcttccctgccattgtgtcagtgctggggcg
tgctgggctgtgttggaggtggggtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_100060435_100061266
seq2: B6Ng01-115O11.b_48_887 (reverse)

seq1  GATGAC-ATCTGATGCCCTCATCTGGTGTGTCTGAAGAC-AGCTACAGTG  48
      |||||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  GATGACAATCTGATGCCCTCATCTGGTGTGTCTGAAGACAAGCTACAGTG  50

seq1  TACTTAA-TTTGT-AATAATAATT-AAAATCTTTAAAAAAAAGAAAAGCA  95
      ||||||| ||||| |||||||||| |||||||||||||||||||||||||
seq2  TACTTAATTTTGTAAATAATAATTAAAAATCTTTAAAAAAAAGAAAAGCA  100

seq1  GACTTCAGTC-AAGCATGGTAGGACATACCTATGGCCTTTTTCTTAGCAC  144
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GACTTCAGTCAAAGCATGGTAGGACATACCTATGGCCTTTTTCTTAGCAC  150

seq1  TCAGGAGGCAGAGGCAGCCTGGGCTTT-AAAATCCTGTCTAAAAAAC-AA  192
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  TCAGGAGGCAGAGGCAGCCTGGGCTTTAAAAATCCTGTCTAAAAAACAAA  200

seq1  AACAAAAACCTCAGCCAGATTTAAAATTTTAGGAATGGGGAGACTGGCTG  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAACCTCAGCCAGATTTAAAATTTTAGGAATGGGGAGACTGGCTG  250

seq1  CTCTTCAGAAGAAGACCTGGGTTCAAGTCGCAGCATTCTCATGGCAGCTC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAGAAGAAGACCTGGGTTCAAGTCGCAGCATTCTCATGGCAGCTC  300

seq1  ACAACTGCCTGTAACTAGCTCCTGGGTAATCCTGTACCCCTACACCCTAC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGCCTGTAACTAGCTCCTGGGTAATCCTGTACCCCTACACCCTAC  350

seq1  ACACATGCAGGCAAAACACCCATGCTTATAAAATAAGTTTGTTTGTTTTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGCAGGCAAAACACCCATGCTTATAAAATAAGTTTGTTTGTTTTT  400

seq1  AAGTGTATTTGCAGTTGATAATTCAGTAAAACAGAACAGGTACAGTTTGT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTATTTGCAGTTGATAATTCAGTAAAACAGAACAGGTACAGTTTGT  450

seq1  TGCTTATAGTGAGAAAAAGGTGTTTGTTTGTTTGTTTGTTTGATTGAATT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATAGTGAGAAAAAGGTGTTTGTTTGTTTGTTTGTTTGATTGAATT  500

seq1  GGGGGGGGGTGGTGTTTGTTTCTGTTTTTTCAAAACGGTTTCTCTGTGTA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGTGGTGTTTGTTTCTGTTTTTTCAAAACGGTTTCTCTGTGTA  550

seq1  GCCCTGGCTGGCCTGGAACTCAGAAATCCGACTGCCTCTGCCTCCTGAGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGCTGGCCTGGAACTCAGAAATCCGACTGCCTCTGCCTCCTGAGT  600

seq1  GCTGGGATTAAAGGTGTGTTCCACCACGCCCGGCTAAAAAAGTATTTTAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATTAAAGGTGTGTTCCACCACGCCCGGCTAAAAAAGTATTTTAT  650

seq1  GTGTATGGATGTTTTGCCTTCAAATGTGCCTGTGTGCTATGTGTTCCTCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGGATGTTTTGCCTTCAAATGTGCCTGTGTGCTATGTGTTCCTCT  700

seq1  GGAAGCCAGTAGATCCCCTGGAGTTGTATATGGTTTTGAGCCACTTTATA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCAGTAGATCCCCTGGAGTTGTATATGGTTTTGAGCCACTTTATA  750

seq1  GGTGCTGGGAAGTCAAACCCAAGTCCTCTCAAAGAGCAGCCAGTGTTCTC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGGAAGTCAAACCCAAGTCCTCTCAAAGAGCAGCCAGTGTTCTC  800

seq1  AACCCACTAAGCCATCTCTCTAGCTTATGATTAAGAATTC  832
      ||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACTAAGCCATCTCTCTAGCTTATGATTAAGAATTC  840

seq1: chr15_99882782_99883411
seq2: B6Ng01-115O11.g_70_699

seq1  GAATTCACTGGATAGACCAGGTTAGCCTCAGAGTCACAGAGAGCTGCCTC  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGAAAGACCAGGTTAGCCTCAGAGTCACAGAGAGCTGCCTC  50

seq1  TGCCTCCTGGGTATTGGAGTTAAAGGTGGGTAGCACACCAGCTAAGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTGGGTATTGGAGTTAAAGGTGGGTAGCACACCAGCTAAGATGT  100

seq1  ATTTGAGTGTGTGTGTACACGCGTGTGTAAGTGTGTAAAGGTAGAATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGTGTGTGTGTACACGCGTGTGTAAGTGTGTAAAGGTAGAATGAA  150

seq1  GATTTCATTTCCATAGTAGAGCCTTGACCATTTCCATGGACAATGGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCATTTCCATAGTAGAGCCTTGACCATTTCCATGGACAATGGGAAT  200

seq1  GATCACTTAAAGGGAGGAGGATGACCATTCAGGAGAGAAAATGGAGAGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTTAAAGGGAGGAGGATGACCATTCAGGAGAGAAAATGGAGAGCG  250

seq1  TGGGAAGACCCCTCTGACAGGCGAGTTCCTGTGAATCGAAGGATGCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGACCCCTCTGACAGGCGAGTTCCTGTGAATCGAAGGATGCAGCA  300

seq1  GGTACCAGGAGGCTTGTCTTATCTGGGGTTGGAAACAGCAAGAAGAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCAGGAGGCTTGTCTTATCTGGGGTTGGAAACAGCAAGAAGAGAAG  350

seq1  ATAACTCCTCTGAAGTGCCAGGGGTGGGCACAGAAGTAAGACTCAGGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCCTCTGAAGTGCCAGGGGTGGGCACAGAAGTAAGACTCAGGTGG  400

seq1  CTAGTGTGCTGCTTTGCTGGAGACAGGTCCTGAGATTTGAAGCTATAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTGCTGCTTTGCTGGAGACAGGTCCTGAGATTTGAAGCTATAGAG  450

seq1  AACCCGGGGGAGGGAGATGGGGAATGTGATTGCATTAGTCAGTCCTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGGGGGAGGGAGATGGGGAATGTGATTGCATTAGTCAGTCCTGGGG  500

seq1  CCCATGGTCAGGGCAGAGACAATGAGTGTAGTTCTGTCTGAATGAGAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGTCAGGGCAGAGACAATGAGTGTAGTTCTGTCTGAATGAGAGTA  550

seq1  CAGAGGCAGATTCACAGCTGCTTCCCTGCCATTGTGTCAGTGCTGGGGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAGATTCACAGCTGCTTCCCTGCCATTGTGTCAGTGCTGGGGCG  600

seq1  TGCTGGGCTGTGTTGGAGGTGGGGTGGGGG  630
      ||||||||||||||||||||||||||||||
seq2  TGCTGGGCTGTGTTGGAGGTGGGGTGGGGG  630