BAC Information

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BAC

Clone NameB6Ng01-116J03
Chromosome15 (Build37)
Map Location 70,320,873 - 70,321,943
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383050
Downstream geneLOC383051, 1700010C24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116J03.bB6Ng01-116J03.g
ACCDH921535DH921536
length1,1821,059
definitionDH921535|Mus musculus domesticus DNA, BAC clone: B6Ng01-116J03, 5' end.DH921536|Mus musculus domesticus DNA, BAC clone: B6Ng01-116J03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgagaaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagt
agatgctggcaaggatgtggagaaaaaggaacactcctccattgttgatg
ggattgcaagcttgtacaaccactctggaaatcagtatgtcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaaaaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggatctggagggcatcatcctgaggtaacacattcacaaaggaa
ctcacacaatatgtactcactgataagtggatattagcccaaaacctagg
atacccaagatataagatacaatttcctaaacacatgaaactcaagaaaa
atgaagactgaagtgtggacactatgccccctccttagaagtgggaacaa
aacacccttggaatgagttacagagacaaagtttggagctgagatgaaag
gatggaccatgtagagattgccatatccagggatccaccccataatcagc
attcaaacgctgacaccattgcatacactagcaagattttatcgaaagga
cccagatgtagctgtctcttgtgagactatgctggggcctagcaacacag
aagtggatgctcacagtcagctaatggatggatctcagggctcccaatgg
aggagcttagaaaaagtacctaaggagctaaagggatttgcaaccgtata
ggtggaacacattatggactaaccagtaccctggagctcttgactctagc
tgcatttgtatcaaaagaatggcctagtcgggcatcactgcaagaaagcc
atttacacgcaaactttatttgctccagtacaggggaccgcccaaggtca
aagggggagttggggtgtggtaagggagagtg
gaattccagagctagaaaaatggagaatgtgattgctttataggcatgag
aacccgaattgagatttcaggctcctaagtaaaaagatgagcatgacagt
atgccttggtgaccttagcgcttgagacacatggtgtggagatgggagga
gaattcaggtgagtcttggaggaatgatgactaaccagtctagctaacat
ggtgagctatagaaccctgacttgacctccacatgaacatacatagacag
gaagaactttctggcttgaatttgtggtgatccacctgcttctgtcttct
gagtgctggaactataccaggttctatcacacacacacacacacacacac
atacctgacattaatgtgtaaagacctaaaatgatgctcactcccaggat
taaaattgggcaatatgtgattagataaatgtgttagtcagggaaaacta
agagaaacatcatatataatagggaattatcagtggcttactggctgtag
tacaagaagtccaagaatcaattagttagctgttcagttcttgaggctga
atatctcacttgttcttcagtatataaagaaaacactaaaatgtaacctc
taatatcagtgaagaaatgttctttccagtgacagcaagcaggcaacgag
taaaaatttccttcttccatcttctttatataggctaccagaagaaggta
tagcccagattaaaagctattgttcccacctcaaaagatccagattaatg
gtcggtttccctgctttgaatgatttaagaaaaaaaaaaatcattctttt
ccttaggctcctctccatttccatagctgtaattctttcagacagaacaa
tttatggtcagagatgtgattgtggaatggcaggccatccctcacttgat
gtcctgttttcctgctggagtgggttctataaattccctctccctacttt
taggcatttcactaaagtccctcctttgatcctgagagtctctacccccc
ccccccaggcctctgtgcattctggacggttccccaaccttatcctgaag
tgctgtttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_70320873_70321943
seq2: B6Ng01-116J03.g_68_1126

seq1  GAATTCCAGAGCTAGAAAAATGGAGAATGTGATTGCTTTATAGGCATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGCTAGAAAAATGGAGAATGTGATTGCTTTATAGGCATGAG  50

seq1  AACCCGAATTGAGATTTCAGGCTCCTAAGTAAAAAGATGAGCATGACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGAATTGAGATTTCAGGCTCCTAAGTAAAAAGATGAGCATGACAGT  100

seq1  ATGCCTTGGTGACCTTAGCGCTTGAGACACATGGTGTGGAGATGGGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTGGTGACCTTAGCGCTTGAGACACATGGTGTGGAGATGGGAGGA  150

seq1  GAATTCAGGTGAGTCTTGGAGGAATGATGACTAACCAGTCTAGCTAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTGAGTCTTGGAGGAATGATGACTAACCAGTCTAGCTAACAT  200

seq1  GGTGAGCTATAGAACCCTGACTTGACCTCCACATGAACATACATAGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGCTATAGAACCCTGACTTGACCTCCACATGAACATACATAGACAG  250

seq1  GAAGAACTTTCTGGCTTGAATTTGTGGTGATCCACCTGCTTCTGTCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACTTTCTGGCTTGAATTTGTGGTGATCCACCTGCTTCTGTCTTCT  300

seq1  GAGTGCTGGAACTATACCAGGTTCTATCACACACACACACACACACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGGAACTATACCAGGTTCTATCACACACACACACACACACACAC  350

seq1  ATACCTGACATTAATGTGTAAAGACCTAAAATGATGCTCACTCCCAGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGACATTAATGTGTAAAGACCTAAAATGATGCTCACTCCCAGGAT  400

seq1  TAAAATTGGGCAATATGTGATTAGATAAATGTGTTAGTCAGGGAAAACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGGGCAATATGTGATTAGATAAATGTGTTAGTCAGGGAAAACTA  450

seq1  AGAGAAACATCATATATAATAGGGAATTATCAGTGGCTTACTGGCTGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACATCATATATAATAGGGAATTATCAGTGGCTTACTGGCTGTAG  500

seq1  TACAAGAAGTCCAAGAATCAATTAGTTAGCTGTTCAGTTCTTGAGGCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAAGTCCAAGAATCAATTAGTTAGCTGTTCAGTTCTTGAGGCTGA  550

seq1  ATATCTCACTTGTTCTTCAGTATATAAAGAAAACACTAAAATGTAACCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCACTTGTTCTTCAGTATATAAAGAAAACACTAAAATGTAACCTC  600

seq1  TAATATCAGTGAAGAAATGTTCTTTCCAGTGACAGCAAGCAGGCAACGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCAGTGAAGAAATGTTCTTTCCAGTGACAGCAAGCAGGCAACGAG  650

seq1  TAAAAATTTCCTTCTTCCATCTTCTTTATATAGGCTACCAGAAGAAGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTTCCTTCTTCCATCTTCTTTATATAGGCTACCAGAAGAAGGTA  700

seq1  TAGCCCAGATTAAAAGCTATTGTTCCCACCTCAAAAGATCCAGATTAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCAGATTAAAAGCTATTGTTCCCACCTCAAAAGATCCAGATTAATG  750

seq1  GTCGGTTTCCCTGCTTTGAATGATTTAAGAAAAAAAAAAATCATTCTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGTTTCCCTGCTTTGAATGATTTAAGAAAAAAAAAAATCATTCTTTT  800

seq1  CCTTAGGCTCCTCTCCATTTCCATAGCTGTAATTCTTTCAGACAGAACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGGCTCCTCTCCATTTCCATAGCTGTAATTCTTTCAGACAGAACAA  850

seq1  -TTATGGTCAGAGATGTGATTGTGGAATGGCAGGCCCATCCCTCACTTGA  899
       ||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTATGGTCAGAGATGTGATTGTGGAATGGCAGG-CCATCCCTCACTTGA  899

seq1  TGTCCTGTTTTCCTGCTGGAGGTGGGTTCTATAAATTCCCTCTCCCTACT  949
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGTCCTGTTTTCCTGCTGGA-GTGGGTTCTATAAATTCCCTCTCCCTACT  948

seq1  ATAAGGCATTTCAACTAAGGTCCCTCCCTTTGATTCCTGAGAGTCTCTTA  999
       | ||||||||| ||||| |||||| ||||||| ||||||||||||||  
seq2  TTTAGGCATTTC-ACTAAAGTCCCT-CCTTTGA-TCCTGAGAGTCTCTAC  995

seq1  CCCCCCCCCCCAGGGCTCTGGTGCATTCTGGACGGTTCCCCCAACCTTTT  1049
      |||||||||||||| |||| ||||||||||||||||| ||||||||||  
seq2  CCCCCCCCCCCAGGCCTCT-GTGCATTCTGGACGGTT-CCCCAACCTT--  1041

seq1  AATTCCTGAGGTTGCCTGTTTC  1071
         |||||| ||   |||||||
seq2  --ATCCTGAAGT--GCTGTTTC  1059