BAC Information

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BAC

Clone NameB6Ng01-119F20
Chromosome15 (Build37)
Map Location 70,025,009 - 70,183,886
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383050
Downstream geneLOC383051
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119F20.bB6Ng01-119F20.g
ACCDH923598DH923599
length1,2111,136
definitionDH923598|Mus musculus domesticus DNA, BAC clone: B6Ng01-119F20, 5' end.DH923599|Mus musculus domesticus DNA, BAC clone: B6Ng01-119F20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,182,661 - 70,183,886)(70,025,009 - 70,026,174)
sequence
gaattcaggagttccacttctctgtatagtggattagagttccattgctg
tgacaaatacctgaaattggagaatattaaatggaacaaagatttatgtt
ggatcctagtttctttggcttaatttcaaagtttgttgatttaattgttc
tagatttagtggtatagcctatcattctgaaagaggttgtggacaaacag
gatagtcacatcatgacagtaaaaaggcaaagagaacaaagcatgaaatt
ggggtaaaggtatagctttccagaccccccaataaaaatacctacttcct
ccaatgaacacttccatctcattaataccaccctgctatgaacccatgta
gattgtgcagaaatcccagcatctgatcaattctcaataattgaatctat
cagctccaaaggaaacctccattatgtaaaggggccagggcagttcattt
ccaagtcataagtagttcaaagaaaatatatttaatctcccaaagggaca
tttttactgaggcattattcagaatagtcacaatatatagaatccatgta
agattagtgcaagcacccaatggatgtaaatatttaaataaaacactcta
tgtataacactttagacttaaaaagagtaaaactctaccatttacttcca
gggaaataaaagaatttacagggaattcaatgctgtaaagtggaatgttt
gtttctacaagaggcgtttgaaaataattgagaaactgaccaaagaattt
tgtctcagttattcaatgcagatacattctggaagctacagtgagtcttg
cctgtggttaattacatttgaaatatgaacaataaattacacagtaaatt
ttctcatcacactaacacaacagaactgtgaaggaaggaacacattgatt
agggagatagaaattattattgagcaatcttacatgtatcaaatattact
ttggttctcaggtgcatatatattgtgagtgagacatggtctaatgtaat
agtctggctgtcctgaattcacctatgtagtcagactgtcctgacttaaa
gagatattgcctatctttgcctgccaatttgagaagataaaggtaataat
accacatgcctgatcacttctagtaatataaattacaatcttactagtag
tctcgaacgttaaggtgtcgggaccttcagctctctgatcttctctagac
gctctactggg
gaattccatcagtgctgtgtcataagtgtgagtattggcattaatgacta
tttaagcatggaaaggttgtaataaagaattaaataagagaaaacccttg
aatacttttagaagacatccattatgaacagagatacaggtcttagcatt
gttttggggagtcagtatacaaaaaagtgttggttataaaggcctggggt
aagcctctggagagttatggacacatccatttataatacactacatttat
gaaaaaatattcccttccttcaataataatcccaagtactgtgctataat
tttgtagtttacaaaattccagtcactgttggctttttggtttgttaata
atcatagcttacaggtagacacattttatcattctacacaatattttatt
acagcttattttcctgtaggttaatatgttgaagtgatttatcttttcat
tgttaaacttattaatagaataaggtgaaaatccattgagctgtctagac
ctgattggtgttaggctcaccactgccacttgtctcctccttgctgcctt
ttcccactaatgtggttttccagggtgagaacattatgaggaaaaaatgg
tctccatcagaaaagtgtcttcctttataatgtttcctagaggggattca
tgagatgttttacaccttttgaagatgtggcagtatatgtaaaataaatt
atagtaaatatataaacagaaagagtccctttttgacactatcacaacaa
ataaactgcacataaccaatccttggtatgcatgtctctgattggcagca
tagtggatcccttcatccagcattgtcaaaacacataacactacaatgtt
cttctgtacctgactgggggaatagaaactggcttcattggacttttggg
ggattttcatcagctatgaagtgcatcctctcaaaatgccattacacttt
gaaatcatgttaagtcctgtcatgctcactatctgaaatacattctattg
tatttatatcatgcttttcagctgtaggtgtgatctcattgggacctgat
tctgatggtgatatgagacagctagcagctaaattgtttgatgtgtattg
acatagaaccgatcctcctgtgagatctgatgtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_70182661_70183886
seq2: B6Ng01-119F20.b_48_1258 (reverse)

seq1  CCCAGTAGAGAG-CTAGAGAAAGAACCCAAGGAGCTGAAGGGGTCTGCAA  49
      |||||||||| | |||||| ||||   ||  |||||||| ||  | |  |
seq2  CCCAGTAGAGCGTCTAGAG-AAGA--TCAGAGAGCTGAA-GGTCCCGACA  46

seq1  CCCTATAGGTAGA-ACAAC-AAAAAGATTGTAAATTATATTTACTAGAAA  97
      || ||  | | || || || |  |||||||||| ||||| |||||||  |
seq2  CCTTAACGTTCGAGACTACTAGTAAGATTGTAATTTATA-TTACTAG--A  93

seq1  AGTGAATCAAGGCATGGTGGTAT--ATACCTTTATC-TCTCAAATTTTGG  144
      |||| ||| |||||| |||||||   |||||||||| |||||||  ||||
seq2  AGTG-ATC-AGGCAT-GTGGTATTATTACCTTTATCTTCTCAAA--TTGG  138

seq1  CAAGCAAAGATAGGC-ATATCTCTGTAAGTTCAGGACCAGTCTGGACTAC  193
      || |||||||||||| |||||||| |||| |||||| |||||| ||||||
seq2  CAGGCAAAGATAGGCAATATCTCTTTAAG-TCAGGA-CAGTCT-GACTAC  185

seq1  ATA-GTGAATTCCAGGACAGCCAGAACTATTTACATTAGACCATGTCTCA  242
      ||| ||||||| |||||||||||| |||| ||||||||||||||||||||
seq2  ATAGGTGAATT-CAGGACAGCCAG-ACTA-TTACATTAGACCATGTCTCA  232

seq1  CTCACCAATATATATGCACCTTAGAAACCCAAAGTAATATTTTGATACAT  292
      |||| |||||||||||||||| ||||  ||||||||||| ||||||||||
seq2  CTCA-CAATATATATGCACCTGAGAA--CCAAAGTAATA-TTTGATACAT  278

seq1  GTAAAGATTGCTCAATAATAATTTCTATCTCCCTAATCAATGTGTTCCTT  342
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GT-AAGATTGCTCAATAATAATTTCTATCTCCCTAATCAATGTGTTCCTT  327

seq1  CCTTCACAGTTCTGTTGTGTTAGTGTGATGAGAAAATTTACTGTGTAATT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACAGTTCTGTTGTGTTAGTGTGATGAGAAAATTTACTGTGTAATT  377

seq1  TATTGTTCATATTTCAAATGTAATTAACCACAGGCAAGACTCACTGTAGC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTCATATTTCAAATGTAATTAACCACAGGCAAGACTCACTGTAGC  427

seq1  TTCCAGAATGTATCTGCATTGAATAACTGAGACAAAATTCTTTGGTCAGT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAATGTATCTGCATTGAATAACTGAGACAAAATTCTTTGGTCAGT  477

seq1  TTCTCAATTATTTTCAAACGCCTCTTGTAGAAACAAACATTCCACTTTAC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAATTATTTTCAAACGCCTCTTGTAGAAACAAACATTCCACTTTAC  527

seq1  AGCATTGAATTCCCTGTAAATTCTTTTATTTCCCTGGAAGTAAATGGTAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGAATTCCCTGTAAATTCTTTTATTTCCCTGGAAGTAAATGGTAG  577

seq1  AGTTTTACTCTTTTTAAGTCTAAAGTGTTATACATAGAGTGTTTTATTTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACTCTTTTTAAGTCTAAAGTGTTATACATAGAGTGTTTTATTTA  627

seq1  AATATTTACATCCATTGGGTGCTTGCACTAATCTTACATGGATTCTATAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTACATCCATTGGGTGCTTGCACTAATCTTACATGGATTCTATAT  677

seq1  ATTGTGACTATTCTGAATAATGCCTCAGTAAAAATGTCCCTTTGGGAGAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGACTATTCTGAATAATGCCTCAGTAAAAATGTCCCTTTGGGAGAT  727

seq1  TAAATATATTTTCTTTGAACTACTTATGACTTGGAAATGAACTGCCCTGG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATATTTTCTTTGAACTACTTATGACTTGGAAATGAACTGCCCTGG  777

seq1  CCCCTTTACATAATGGAGGTTTCCTTTGGAGCTGATAGATTCAATTATTG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTACATAATGGAGGTTTCCTTTGGAGCTGATAGATTCAATTATTG  827

seq1  AGAATTGATCAGATGCTGGGATTTCTGCACAATCTACATGGGTTCATAGC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGATCAGATGCTGGGATTTCTGCACAATCTACATGGGTTCATAGC  877

seq1  AGGGTGGTATTAATGAGATGGAAGTGTTCATTGGAGGAAGTAGGTATTTT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGTATTAATGAGATGGAAGTGTTCATTGGAGGAAGTAGGTATTTT  927

seq1  TATTGGGGGGTCTGGAAAGCTATACCTTTACCCCAATTTCATGCTTTGTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGGGGTCTGGAAAGCTATACCTTTACCCCAATTTCATGCTTTGTT  977

seq1  CTCTTTGCCTTTTTACTGTCATGATGTGACTATCCTGTTTGTCCACAACC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGCCTTTTTACTGTCATGATGTGACTATCCTGTTTGTCCACAACC  1027

seq1  TCTTTCAGAATGATAGGCTATACCACTAAATCTAGAACAATTAAATCAAC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAGAATGATAGGCTATACCACTAAATCTAGAACAATTAAATCAAC  1077

seq1  AAACTTTGAAATTAAGCCAAAGAAACTAGGATCCAACATAAATCTTTGTT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGAAATTAAGCCAAAGAAACTAGGATCCAACATAAATCTTTGTT  1127

seq1  CCATTTAATATTCTCCAATTTCAGGTATTTGTCACAGCAATGGAACTCTA  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAATATTCTCCAATTTCAGGTATTTGTCACAGCAATGGAACTCTA  1177

seq1  ATCCACTATACAGAGAAGTGGAACTCCTGAATTC  1226
      ||||||||||||||||||||||||||||||||||
seq2  ATCCACTATACAGAGAAGTGGAACTCCTGAATTC  1211

seq1: chr15_70025009_70026174
seq2: B6Ng01-119F20.g_69_1204

seq1  GAATTCCATCAGTGCTGTGTCATAAGTGTGAGTATTGGCATTAATGACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAGTGCTGTGTCATAAGTGTGAGTATTGGCATTAATGACTA  50

seq1  TTTAAGCATGGAAAGGTTGTAATAAAGAATTAAATAAGAGAAAACCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCATGGAAAGGTTGTAATAAAGAATTAAATAAGAGAAAACCCTTG  100

seq1  AATACTTTTAGAAGACATCCATTATGAACAGAGATACAGGTCTTAGCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTTTAGAAGACATCCATTATGAACAGAGATACAGGTCTTAGCATT  150

seq1  GTTTTGGGGAGTCAGTATACAAAAAAGTGTTGGTTATAAAGGCCTGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGGGAGTCAGTATACAAAAAAGTGTTGGTTATAAAGGCCTGGGGT  200

seq1  AAGCCTCTGGAGAGTTATGGACACATCCATTTATAATACACTACATTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCTGGAGAGTTATGGACACATCCATTTATAATACACTACATTTAT  250

seq1  GAAAAAATATTCCCTTCCTTCAATAATAATCCCAAGTACTGTGCTATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATATTCCCTTCCTTCAATAATAATCCCAAGTACTGTGCTATAAT  300

seq1  TTTGTAGTTTACAAAATTCCAGTCACTGTTGGCTTTTTGGTTTGTTAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGTTTACAAAATTCCAGTCACTGTTGGCTTTTTGGTTTGTTAATA  350

seq1  ATCATAGCTTACAGGTAGACACATTTTATCATTCTACACAATATTTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGCTTACAGGTAGACACATTTTATCATTCTACACAATATTTTATT  400

seq1  ACAGCTTATTTTCCTGTAGGTTAATATGTTGAAGTGATTTATCTTTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTATTTTCCTGTAGGTTAATATGTTGAAGTGATTTATCTTTTCAT  450

seq1  TGTTAAACTTATTAATAGAATAAGGTGAAAATCCATTGAGCTGTCTAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAACTTATTAATAGAATAAGGTGAAAATCCATTGAGCTGTCTAGAC  500

seq1  CTGATTGGTGTTAGGCTCACCACTGCCACTTGTCTCCTCCTTGCTGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGGTGTTAGGCTCACCACTGCCACTTGTCTCCTCCTTGCTGCCTT  550

seq1  TTCCCACTAATGTGGTTTTCCAGGGTGAGAACATTATGAGGAAAAAATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACTAATGTGGTTTTCCAGGGTGAGAACATTATGAGGAAAAAATGG  600

seq1  TCTCCATCAGAAAAGTGTCTTCCTTTATAATGTTTCCTAGAGGGGATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATCAGAAAAGTGTCTTCCTTTATAATGTTTCCTAGAGGGGATTCA  650

seq1  TGAGATGTTTTACACCTTTTGAAGATGTGGCAGTATATGTAAAATAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGTTTTACACCTTTTGAAGATGTGGCAGTATATGTAAAATAAATT  700

seq1  ATAGTAAATATATAAACAGAAAGAGTCCCTTTTTGACACTATCACAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAATATATAAACAGAAAGAGTCCCTTTTTGACACTATCACAACAA  750

seq1  ATAAACTGCACATAACCAATCCTTGGTATGCATGTCTCTGATTGGCAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTGCACATAACCAATCCTTGGTATGCATGTCTCTGATTGGCAGCA  800

seq1  TAGTGGATCCCTTCATCCAGCATTGTCAAAACACATAACACTACAATGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGATCCCTTCATCCAGCATTGTCAAAACACATAACACTACAATGTT  850

seq1  CTTCTGTTACCTGACTGGGGGAATAGAAACTGGCTTCATTGGACTTTTGG  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTG-TACCTGACTGGGGGAATAGAAACTGGCTTCATTGGACTTTTGG  899

seq1  GGGATTTTCATCAGCTATGAAGTGCATCCTTCTCAAAAATGCCATTACAC  950
      ||||||||||||||||||||||||||||| |||| |||||||||||||||
seq2  GGGATTTTCATCAGCTATGAAGTGCATCC-TCTC-AAAATGCCATTACAC  947

seq1  TTTGAAATCATTGTTAAGTCCTTGGTCATGCTCAACTATCTGATATACAT  1000
      |||||||||| |||||||||||  ||||||||| ||||||||| ||||||
seq2  TTTGAAATCA-TGTTAAGTCCT--GTCATGCTC-ACTATCTGAAATACAT  993

seq1  TCTATTGTTATTTTATATCAATGCTTTTTCAGCTGTAGGTGGTGATCTCA  1050
      ||||||||   |||||||| |||| ||||||||||||||| |||||||||
seq2  TCTATTGT--ATTTATATC-ATGC-TTTTCAGCTGTAGGT-GTGATCTCA  1038

seq1  TTGGGACCTGGATATCTGAATGGTGATAGTGAG-CAGCTTAGCAGCTTAA  1099
      ||||||||| ||| |||| ||||||||| |||| |||| ||||||||  |
seq2  TTGGGACCT-GAT-TCTG-ATGGTGATA-TGAGACAGC-TAGCAGCT--A  1081

seq1  AATTGTTCTGAATGTGTAATGACCATAAAGTAACTCAGAATCACTCCTGT  1149
      ||||||| || ||||||| ||||   | || | |     ||| |||||||
seq2  AATTGTT-TG-ATGTGTATTGAC---ATAGAACC----GATC-CTCCTGT  1121

seq1  GAAGAATCTGATGTATT  1166
      ||   ||||||||||||
seq2  GA--GATCTGATGTATT  1136