BAC Information

Click to search

BAC

Clone NameB6Ng01-120H15
Chromosome15 (Build37)
Map Location 68,089,276 - 68,090,320
singlet/doubletsinglet
Overlap geneZfat1
Upstream genenone
Downstream geneLOC100041000, EG665945, EG633752, Khdrbs3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120H15.bB6Ng01-120H15.g
ACCDH924411DH924412
length1,2471,024
definitionDH924411|Mus musculus domesticus DNA, BAC clone: B6Ng01-120H15, 5' end.DH924412|Mus musculus domesticus DNA, BAC clone: B6Ng01-120H15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataaggaaataaaagcattgtaaaaattaaagctgaaatgaag
atggaatttaaaaccccagtaacacaactagaaaattcaaaggaaagact
tacaacagtagaatgaatcaaagagcgaaccaagtattaggacttgaaga
taaactaaaggctctagatgaaataagcaaaggtacggaaaacttaaagc
acaagacaccgaagagacacaactagaaaagaaaatccccaaggtgtatc
atgtttaaaacattaagtatgcaaaacagaggaagactattgcaagctgc
aggagaaaacacacacacacacacaagtcacatatgaagaaaaaaaatcc
catcagatatcaacttatttctcaatgaaaactctgaaatctagaagagc
caatgagttccaggtcctaacagactgtgacagccattctagactaatac
actcaacaaaactgcctgcaagacttaaacagaagaaggaaaaacttaca
tccaacagacaaacctaaataaaatacagaaaacaatatttcaggctgaa
gagagaaattaataaagctaagaatctgtacaaaatatgaagaaattatg
aaaatacagagtaccactaagaattcaaacaccaccactaaatataaacc
ccacaatgctaacaatcaacattcatgttttgatggtaactttaagtatc
aatagcctcaattctccaaagacccaggctgaatgaatggatcaagaaat
aaaacccacctatatgtcttctacaagaaacacatcttagatttaaagat
ggtttacaagcttagagtaaaaggatgaacaaaatattccaatcaaacag
gaccaggaagcacagatctgccaaaatagatttaaaactaaaatcaatca
gaagagattcaaaaataaaagaatacttcattctaaccaagggaacagct
atccaaaattgtgagtggcattatataaatctgaaggctggtatataacc
atcttacaatatgattctgtgatcggtgagcaataggaattcttctactc
ctcatatctctaatttctttctttgggggtcattattccctaacttagta
attcctgttttctgaagctgtgtagagaattttctgtttctagcaagtgc
ataaaagaactggctgttctggattactgtatccgctctttgcgaagata
tttactagaatcatgacacttctctggagtatgcactcactactcta
gaattccaggggacagtgacaaaggccaagcaaacatatggttcacattg
ttttccaagccagaagtccgatctctttaaagctccactgtcaggaatct
gggctctcaacttttctcttcttcagtgaatgaccaactaagaacaacca
ggagacactggcagcgaccctcggaagtcagggtccaagagtctaaattg
gtgtcaatcacaggctagaggtcacaagcttaaggttaaggggagtcacc
aggggttaagtgaaaagtctacccttccaatgagaccagctaaagcagct
tctggctagacagtctgagggctgcctggaggaagtggcctggagccact
tcgttcaagcgcacgaggacaatgccctacagcactgggccaaagacaga
aggcaaatgactacttgcatgggacagggtcacccgtgataaagcccatc
tctctcattggccgctccctctgaaggtcactagagaaggctggacttga
agcacgtcctggctaagaacacggggttgatcactgggaaggggaagtca
tctactttacgaaactgttgactaagcaagaagccaaactcaaagctcac
acaaacagcggcaggcaacgggactcgaacacctatgcagccagacgccc
gcggatggccgctggcgggcgccctgggcaccgcccacagccctggaaac
tgctccccaggcgcgcagggcgctcccctcgctttgctctccaccgcctc
ccttttttttctttcctgcggcagggatcaagccagcttccaaacgtggg
ccgcagaacgctgcgacgtcggcgctccgcccgcccgtggttccctccgc
cggcccgaatctgcgcgcgccttccccattgaccaccacgagcgtttccc
gcgcgggccgcgcccaccccacccgcggcccaccccatccggctactggc
gtcgcgtttcatggcacgcccccacgcggagaaaaaaaaagctcggctct
cccggccctccggctgagcgagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_68089276_68090320
seq2: B6Ng01-120H15.g_68_1091

seq1  GAATTCCAGGGGACAGTGACAAAGGCCAAGCAAACATATGGTTCACATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGGACAGTGACAAAGGCCAAGCAAACATATGGTTCACATTG  50

seq1  TTTTCCAAGCCAGAAGTCCGATCTCTTTAAAGCTCCACTGTCAGGAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAAGCCAGAAGTCCGATCTCTTTAAAGCTCCACTGTCAGGAATCT  100

seq1  GGGCTCTCAACTTTTCTCTTCTTCAGTGAATGACCAACTAAGAACAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCTCAACTTTTCTCTTCTTCAGTGAATGACCAACTAAGAACAACCA  150

seq1  GGAGACACTGGCAGCGACCCTCGGAAGTCAGGGTCCAAGAGTCTAAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACACTGGCAGCGACCCTCGGAAGTCAGGGTCCAAGAGTCTAAATTG  200

seq1  GTGTCAATCACAGGCTAGAGGTCACAAGCTTAAGGTTAAGGGGAGTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAATCACAGGCTAGAGGTCACAAGCTTAAGGTTAAGGGGAGTCACC  250

seq1  AGGGGTTAAGTGAAAAGTCTACCCTTCCAATGAGACCAGCTAAAGCAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTAAGTGAAAAGTCTACCCTTCCAATGAGACCAGCTAAAGCAGCT  300

seq1  TCTGGCTAGACAGTCTGAGGGCTGCCTGGAGGAAGTGGCCTGGAGCCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTAGACAGTCTGAGGGCTGCCTGGAGGAAGTGGCCTGGAGCCACT  350

seq1  TCGTTCAAGCGCACGAGGACAATGCCCTACAGCACTGGGCCAAAGACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCAAGCGCACGAGGACAATGCCCTACAGCACTGGGCCAAAGACAGA  400

seq1  AGGCAAATGACTACTTGCATGGGACAGGGTCACCCGTGATAAAGCCCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAATGACTACTTGCATGGGACAGGGTCACCCGTGATAAAGCCCATC  450

seq1  TCTCTCATTGGCCGCTCCCTCTGAAGGTCACTAGAGAAGGCTGGACTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATTGGCCGCTCCCTCTGAAGGTCACTAGAGAAGGCTGGACTTGA  500

seq1  AGCACGTCCTGGCTAAGAACACGGGGTTGATCACTGGGAAGGGGAAGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACGTCCTGGCTAAGAACACGGGGTTGATCACTGGGAAGGGGAAGTCA  550

seq1  TCTACTTTACGAAACTGTTGACTAAGCAAGAAGCC-AACTCAAAGCTCAC  599
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCTACTTTACGAAACTGTTGACTAAGCAAGAAGCCAAACTCAAAGCTCAC  600

seq1  ACAAACAGCGGCAGGCAACGGGACTCGAACACCTATGCAGCCAGACGCCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAGCGGCAGGCAACGGGACTCGAACACCTATGCAGCCAGACGCCC  650

seq1  GCGGATGGCCGCTGGCGGGCGCCCT-GGCACCGCCCACAGCCCTGGAAAC  698
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GCGGATGGCCGCTGGCGGGCGCCCTGGGCACCGCCCACAGCCCTGGAAAC  700

seq1  TGCTCCCCAGGCGCGCAGGGCGCTCCCCTCGC-TTGCTCTCCACCGCCTC  747
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGCTCCCCAGGCGCGCAGGGCGCTCCCCTCGCTTTGCTCTCCACCGCCTC  750

seq1  CCTTTTTTTTCTTTCCTGCGGCA-GGATCAAGCCAGCTTCCAAACGTGGG  796
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCTTTTTTTTCTTTCCTGCGGCAGGGATCAAGCCAGCTTCCAAACGTGGG  800

seq1  CCGCAGAACGCTGCGACGTCGGCGCTCCGCCCGCCCGTGGATCCCTCCGC  846
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCGCAGAACGCTGCGACGTCGGCGCTCCGCCCGCCCGTGGTTCCCTCCGC  850

seq1  CGGCCCGAGTCTGCGCGCGGCCTCCCCACTGCACACCACGAGCGGTTTCC  896
      |||||||| |||||||||| | |||||| ||  |||||||||| ||||||
seq2  CGGCCCGAATCTGCGCGCGCCTTCCCCATTGACCACCACGAGC-GTTTCC  899

seq1  CGCGCGGCGCCGCGCCCCACCCCCACCCCGCCGCGCCCCAACCCCCATCC  946
      ||||||| |||||||||   ||||||    ||||| ||||  |||||| |
seq2  CGCGCGG-GCCGCGCCC--ACCCCAC----CCGCGGCCCA--CCCCAT-C  939

seq1  CCGCTCACCTGCCGTCCGCGTCTCCATGGCAACGCCCCCACGGCGGAGGA  996
      | |||   ||| ||| ||||| | |||||| |||||||||| ||||| ||
seq2  CGGCT--ACTGGCGT-CGCGT-TTCATGGC-ACGCCCCCAC-GCGGA-GA  982

seq1  AAAAAAAAGCCTCGGGCTCTTCCCGGCTCCCTCCCGGGCTGAGCGAGAA  1045
      ||||||||| ||| ||||| ||||||  ||||||  |||||||||||||
seq2  AAAAAAAAG-CTC-GGCTC-TCCCGG--CCCTCC--GGCTGAGCGAGAA  1024