MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-122L11
Chromosome	15 (Build37)
Map Location	48,543,899 - 48,545,039
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Csmd3
Downstream gene	EG665146, LOC100039600, LOC100039539, LOC665160
Link	Open Mouse BAC browser

Click to get alignment info.

name	Csmd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239420 MGI:2386403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665146 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665146 MGI:3643004
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins pseudo : _no_value

name	LOC100039600 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039600
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039539 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039539
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC665160 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Csmd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487116 GeneID:239420 MGI:2386403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CUB and Sushi multiple domains 3 transcript_id : NM_001081391.1

name	Csmd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487117 GeneID:239420 MGI:2386403
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 product : CUB and Sushi multiple domains 3 protein_id : NP_001074860.1

name	LOC100039600 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039600
definition	number : 1 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 1 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 2 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 3 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 4 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 5 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 6 pseudo : _no_value

name	LOC665160 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665160
definition	number : 1 pseudo : _no_value

name	EG665146 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149266578 GeneID:665146 MGI:3643004
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins product : predicted gene, EG665146 pseudo : _no_value transcript_id : XR_035659.1

clone name	MSMg01-164P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116P10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-348M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522P14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-354H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152K04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-122L11.b	B6Ng01-122L11.g
ACC	DH926070	DH926071
length	1,133	1,217
definition	DH926070\|Mus musculus domesticus DNA, BAC clone: B6Ng01-122L11, 5' end.	DH926071\|Mus musculus domesticus DNA, BAC clone: B6Ng01-122L11, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcattgattaactatagtaaaggtaaaactgttttctctctgagat atttttttaacatgattaaaaaaaaagaatgaacattcactgaaatcaat actgtttctagaatgcaaatgaaatattattctcctttttgcctcattca ccacgattgaacatattaagttttatttatgaacaactttgtagataatt ttccattaagacaaacactttcagcaaagcagcaggacacacatttccca tgcccaaaatcaatagctcttctgtataccaataaggaactcaccaagaa agaaattatgaaactatcacatgtacaataactttgtagaaaccttaaaa catacctgacaaatgatataaaataatttgttggggattttgtctaacac ttatgttattgtgtcccccaaattgcaggagaatccacagataagacact gagggtccctgctcccagttggttttgattggcaaataaagttgctgttg ggcagagagacagaggcaggactttaagattccccaggaaaggggaccca gggaagaacgagatagagccgccattccaggaaaggactaaagactaggc tgagaagtgcagaagaaagagcatagcaatcatgtaagagtcaggaattg tggcccaggaccgctgcaggtctgggtccaggtcagccaagacagaatag tgattttagtaaataataactcaggaatatcggagagagtatgttagctt tgagaagctctggaagtggcccagccattgagctgtttaaggaatattaa aatataaggctgcatgtgtgtgtctttcattcgggaacccagaacattga ggtgggtaccaacgtagccacagtcaggtcaattagagaagagattaatt ggcaactgtaacaatgattatattatgaaaatgatgggaatgaataataa aggaagacactagaatgtggacatcttgcatgcacatggactgataaaat ttatattgtcaaatgatacataatgaaaacaatcaaccagtcaacaaatc ccataatattccagtggtattacttacaggacaatacaaatcttaaaatg tttttattttataatataaaaatggtatataag	gaattctttgcatatattagatattatccctctatcagatataagattgg tttaaaaaatgttttcccaatctgttggttgacctcttgtactattgaca gtgtcctttgccttatagtagctttgcaattttatggggtcccatttgtc gattcttagagcttaagccattggtgttctgttcaggaaaatttcccctg tgcccatgtgcttgagaatcttctccactttttttttctattagtttccg cgcacctggttttatgtggaggtccttgactcacttggagttgagctttg tacaaggagataagcatgggtcaatttgcatttttctatatgctaactgc cagttaaaccagtagcatttgttgaaaatgctgtcttttttccactggat ggttttagctcctttgtcaaagatcaagtgatcataggtatgtggattca cttctgggtcttcaattctattccattgatctagctgttactgtatcaat aacatgcaagctattttttttatcactattgctctgtattactgcttaag gtctgagatactgattactgtagaagttcttttattgttaagaatcattt tggctattctgtttttaatgttgttgttgttattattccagatgaatttg caaattaccttttctaactctatgaagaattgatttggaattttaatggg gattgcatttaatctgtagattgctttcggcaagatggtcatttttacta tataaatcctgtcattccatgagcataggagatctttctatcttctgggg tcttcttcaatttcttttcttcagagacttgaagttcttgttatacagat ctttcactagtttgggttagagtcacaccaagatacttatattgtgacta ttgttgaagggcatgtttctctaattgtttctttctcagtctatttatcc ttagtataggaaggctacagatttgttgagttaatttttatatcctgccc ttgctgagtgttatcactgtagagtctctggggagcttttggtttaccta gttataacttaatcatctgcaatacggtagtttaactcttccttcaatct ggttcctttggataagaactatactgagtagataaggaaaagtggcagtc tgtcagtacagatttggggaatgcctcagattctctcccataagtggtag ccacagccaccgatggt
quality values	Open. Hide. 50 61 29 32 61 36 32 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 36 37 12 18 10 9 12 12 13 13 11 32 28 55 59 59 61 61 61 61 61 61 61 61 61 59 49 61 59 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 59 49 28 30 28 30 28 36 30 35 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 55 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 59 55 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 53 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 53 61 61 61 47 61 61 61 61 61 61 61 61 61 61 52 61 61 61 45 53 53 47 37 42 46 43 57 57 57 57 46 57 57 57 53 27 47 47 47 42 42 47 53 57 45 57 43 43 53 57 52 39 38 53 50 57 53 47 57 52 53 57 45 53 53 52 47 34 45 57 57 57 53 53 57 47 35 53 45 57 52 53 53 47 53 52 39 57 53 57 53 57 28 57 57 36 41 52 45 53 45 57 52 42 57 57 53 42 57 43 52 30 41 57 45 53 53 53 52 42 45 52 57 50 53 53 42 57 34 52 50 40 43 57 52 34 28 57 40 30 57 31 24 52 47 36 37 47 38 23 35 47 50 53 50 42 36 29 57 32 42 53 57 46 38 39 39 53 28 50 38 37 42 50 36 53 53 33 42 42 53 36 33 52 52 40 37 48 36 37 53 33 24 57 52 53 33 41 37 26 57 37 36 42 52 38 30 31 37 53 39 48 20 38 33 33 37 35 33 48 57 30 53 28 53 37 44 37 30 26 19 40 33 41 40 28 38 28 57 33 29 44 31 47 48 27 33 44 36 35 31 40 30 30 25 30 31 40 36 47 45 27 28 30 45 28 34 29 30 31 28 39 34 44 21 51 34 38 30 28 36 24 36 27 32 31 33 34 51 51 29 32 25 31 28 48 29 41 14 39 33 24 19 29 36 30 41 32 32 29 29 28 33 29 51 23 30 26 27 37 31 31 51 32 20 31 18 36 32 15 21 33 34 30 24 14 19 29 34 24 39 13 22 51 31 20 25 28 30 15 23 30 29 28 36 24 23 20 10 31 15 24 17 28 20 10 46 25 28 14 29 24 32 29 27 51 29 46 43 12 32 20 21 14 30 23 23 25 31 43 31 29 30 14 25 33 43 26 33 27 33 14 21 25 33 23 22 35 31 34 26 22 28 10 16 27 29 51 51 21 24 28 27 15 46 51 23 29 30 33 29 21 25 28 16 25 34 24 51 36 12 8 38 23 19 31 14 13 23 27 26 18 27 29 21 34 6 16 19 24 13 32 14 20 5 12 36 25 13 20 31 20 15 29 14 26 20 28 14 28 18 34 23 21 8 51 39 24 16 44 24 19 27 13 9 4 15 15 28 32 44 28 17 32 24 18 9 21 8 44 5 16 31 33 26 38 35 16 12 8 26 17 23 15 20 10 22 22 31 16 19 30 16 11 23 37 21 6 8 28 23 18 29 29 12 4 7 5 26 12 23 6 4 4 13 29 5 9 5 26 16 18 19 29 9 9 4 10 4 3 7 4 6 9 5 20 8 26 18 12 19 5 8 20 30 35 25 14 9 3 21 31 16 5 5 17 35 18 7 9 23 5 18 5 5 7 8 35 35 32 26 7 24 26 6 6 14 6 11 7 27 7	Open. Hide. 61 61 43 39 49 31 23 23 21 22 17 17 37 34 61 61 61 61 49 55 61 61 61 49 61 61 61 61 61 55 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 59 55 55 59 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 55 61 61 61 61 61 47 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 45 61 61 61 61 61 61 61 61 61 61 61 57 52 57 53 53 57 57 57 53 57 53 53 57 57 53 57 57 53 57 57 57 53 57 57 57 57 57 47 57 57 57 57 57 57 45 53 52 57 52 57 57 53 57 57 57 53 57 57 57 57 47 53 53 53 47 53 53 57 53 57 45 53 53 42 46 42 53 53 53 57 28 52 50 45 53 53 47 53 45 53 45 53 53 57 41 53 30 57 57 36 57 57 53 57 57 57 47 45 37 38 57 14 35 42 57 24 57 41 38 53 30 41 52 57 45 53 50 45 53 43 31 57 53 53 53 30 57 43 57 28 41 36 43 57 34 52 38 38 43 52 38 50 52 27 50 50 38 52 50 33 53 53 50 30 36 52 30 47 57 26 42 57 52 33 40 38 57 50 53 38 33 52 47 27 57 53 46 47 37 33 33 53 34 53 37 37 41 42 57 53 18 31 52 24 37 33 37 29 57 37 52 40 33 37 37 57 57 28 29 52 37 57 57 57 53 34 35 28 33 27 27 31 57 37 27 53 37 53 40 53 30 53 25 41 35 28 40 28 37 57 40 44 37 40 34 34 53 30 41 25 47 31 21 31 31 20 51 51 51 30 21 39 33 38 39 41 34 25 51 44 32 30 31 27 47 27 34 29 39 29 28 33 30 32 30 48 23 34 28 30 29 17 29 39 14 20 20 35 25 51 27 29 31 28 28 35 31 33 29 20 33 51 51 29 25 35 29 29 25 12 37 29 31 29 29 51 39 14 13 46 46 10 17 18 30 32 15 8 46 8 29 26 29 18 24 31 33 25 32 24 28 31 19 29 15 35 28 28 28 33 18 14 32 25 35 33 51 34 34 20 29 27 33 12 24 39 26 26 51 22 39 9 31 26 34 13 23 35 22 31 15 6 30 11 26 14 29 21 23 17 32 8 21 29 27 14 32 23 9 28 29 25 12 9 6 33 22 8 8 20 22 17 28 46 31 17 19 24 15 14 46 13 12 10 24 22 27 30 8 23 21 8 36 14 12 5 44 28 28 22 24 18 20 23 28 19 26 32 51 21 25 28 20 10 25 15 5 11 29 29 10 13 15 23 24 33 14 25 23 26 16 23 6 10 29 19 51 12 21 28 36 13 30 17 19 17 17 28 8 32 44 28 6 8 6 18 12 21 23 14 25 28 38 16 4 5 4 10 7 18 35 18 33 11 11 5 8 12 8 5 7 3 4 4 7 6 3 3 8 6 5 5 6 20 3 23 10 11 5 29 20 36 29 7 20 17 14 30 21 6 13 9 6 15 6 3 4 10 29 5 5 7 10 15 9 8 6 5 4 5 16 5 7 5 5 4 2 3 4 8 5 3 9 14 18 26 23 12 14 10 24 11 7 10 7 13 9 6 3 4 12 5 5 6 14 9 9 12 9 15 4 5 14 5 9 12 11 6 20 7 14 11 5 4 6 8 6 9 6 20 9 5 6 6 7 17 5 15 4 19 16 13 22 29 20 11 4 19 11 3 3 4 2 4 2 1 1 3 1 2 2 1 3 2 5 4 3 5 3 3 12 30 5 4 12 6 4 9 5 4 9 5 7 3 7 3 5 9 20 4 3 24 14 3 5 3 9 4 2 5 7 7 9 3 5 4 6 3 13 6 9 4 6 3 3 11 4 3 18 13 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr15_48543899_48545039
seq2: B6Ng01-122L11.b_50_1182

seq1  GAATTCATTGATTAACTATAGTAAAGGTAAAACTGTTTTCTCTCTGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGATTAACTATAGTAAAGGTAAAACTGTTTTCTCTCTGAGAT  50

seq1  ATTTTTTTAACATGATTAAAAAAAAAGAATGAACATTCACTGAAATCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTAACATGATTAAAAAAAAAGAATGAACATTCACTGAAATCAAT  100

seq1  ACTGTTTCTAGAATGCAAATGAAATATTATTCTCCTTTTTGCCTCATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTCTAGAATGCAAATGAAATATTATTCTCCTTTTTGCCTCATTCA  150

seq1  CCACGATTGAACATATTAAGTTTTATTTATGAACAACTTTGTAGATAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGATTGAACATATTAAGTTTTATTTATGAACAACTTTGTAGATAATT  200

seq1  TTCCATTAAGACAAACACTTTCAGCAAAGCAGCAGGACACACATTTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTAAGACAAACACTTTCAGCAAAGCAGCAGGACACACATTTCCCA  250

seq1  TGCCCAAAATCAATAGCTCTTCTGTATACCAATAAGGAACTCACCAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAAAATCAATAGCTCTTCTGTATACCAATAAGGAACTCACCAAGAA  300

seq1  AGAAATTATGAAACTATCACATGTACAATAACTTTGTAGAAACCTTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTATGAAACTATCACATGTACAATAACTTTGTAGAAACCTTAAAA  350

seq1  CATACCTGACAAATGATATAAAATAATTTGTTGGGGATTTTGTCTAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTGACAAATGATATAAAATAATTTGTTGGGGATTTTGTCTAACAC  400

seq1  TTATGTTATTGTGTCCCCCAAATTGCAGGAGAATCCACAGATAAGACACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTATTGTGTCCCCCAAATTGCAGGAGAATCCACAGATAAGACACT  450

seq1  GAGGGTCCCTGCTCCCAGTTGGTTTTGATTGGCAAATAAAGTTGCTGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTCCCTGCTCCCAGTTGGTTTTGATTGGCAAATAAAGTTGCTGTTG  500

seq1  GGCAGAGAGACAGAGGCAGGACTTTAAGATTCCCCAGGAAAGGGGACCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGAGACAGAGGCAGGACTTTAAGATTCCCCAGGAAAGGGGACCCA  550

seq1  GGGAAGAACGAGATAGAGCCGCCATTCCAGGAAAGGACTAAAGACTAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAACGAGATAGAGCCGCCATTCCAGGAAAGGACTAAAGACTAGGC  600

seq1  TGAGAAGTGCAGAAGAAAGAGCATAGCAATCATGTAAGAGTCAGGAATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGTGCAGAAGAAAGAGCATAGCAATCATGTAAGAGTCAGGAATTG  650

seq1  TGGCCCAGGACCGCTGCAGGTCTGGGTCCAGGTCAGCCAAGACAGAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCAGGACCGCTGCAGGTCTGGGTCCAGGTCAGCCAAGACAGAATAG  700

seq1  TGATTTTAGTAAATAATAACTCAGGAATATCGGAGAGAGTATGTTAGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTAGTAAATAATAACTCAGGAATATCGGAGAGAGTATGTTAGCTT  750

seq1  TGAGAAGCTCTGGAAGTGGCCCAGCCATTGAGCTGTTTAAGGAATATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGCTCTGGAAGTGGCCCAGCCATTGAGCTGTTTAAGGAATATTAA  800

seq1  AATATAAGGCTGCATGTGTGTGTCTTTCATTCGGGAACCCAGAACATTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAGGCTGCATGTGTGTGTCTTTCATTCGGGAACCCAGAACATTGA  850

seq1  GGTGGGTACCAACGTAGCCACAGTCAGGTCAATTAGAGAAGAGATTAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTACCAACGTAGCCACAGTCAGGTCAATTAGAGAAGAGATTAATT  900

seq1  GGCAACTGTAACAATGATTATATTATGAAAATGATGGGAATGAATAATAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACTGTAACAATGATTATATTATGAAAATGATGGGAATGAATAATAA  950

seq1  A-GAAGACACTAGAATGTGGACAATCCTTGCATGCACATGGACTGATAAA  999
      | |||||||||||||||||||||   ||||||||||||||||||||||||
seq2  AGGAAGACACTAGAATGTGGACA--TCTTGCATGCACATGGACTGATAAA  998

seq1  ATTTATATTGTCAAAATGATACATTAATGAAAACAATCAACCAGTCAACA  1049
      |||||||||||| |||||||||| ||||||||||||||||||||||||| 
seq2  ATTTATATTGTC-AAATGATACA-TAATGAAAACAATCAACCAGTCAAC-  1045

seq1  AAATCCCATAATATTCCAGTGGTATTACTTACAGACCAATTACAAATCCT  1099
      ||||||||||||||||||||||||||||||||||  ||| ||||||| ||
seq2  AAATCCCATAATATTCCAGTGGTATTACTTACAGGACAA-TACAAAT-CT  1093

seq1  AAAAATGTTTTATTTTTATAAATATAAAAAATGGTATATAAG  1141
       ||||||||||  |||||| ||||| ||||||||||||||||
seq2  TAAAATGTTTTTATTTTAT-AATAT-AAAAATGGTATATAAG  1133

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information